RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 KARSQ15046 597 aaKnown RBP10.56□□□□□ -0.72
APTX-219ENST00000474658 TMEM119Q4V9L6 283 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 ODR4Q5SWX8 454 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 FAM102BQ5T8I3 360 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 ATL3Q6DD88 541 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 RTN4RL1Q86UN2 441 aaPredicted RBP10.56□□□□□ -0.72
APTX-219ENST00000474658 ZNF410Q86VK4 478 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 MCPH1Q8NEM0 835 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 PHOSPHO2Q8TCD6 241 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 ASAP3Q8TDY4 903 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 LRRC15Q8TF66 581 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 CALML4Q96GE6 196 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 SLC9A7Q96T83 725 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 GCOM2Q9BZD3 368 aaPredicted RBP10.56□□□□□ -0.72
APTX-219ENST00000474658 CCSER1Q9C0I3 900 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 POLR3FQ9H1D9 316 aaPredicted RBP10.56□□□□□ -0.72
APTX-219ENST00000474658 IFT122Q9HBG6 1241 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 POLD4Q9HCU8 107 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 CFAP45Q9UL16 551 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 PTPRSQ13332 1948 aa10.56□□□□□ -0.72
APTX-219ENST00000474658 MGEA5O60502 916 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 AMHP03971 560 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 SSBP05455 408 aaKnown RBP eCLIP10.55□□□□□ -0.72
APTX-219ENST00000474658 PLCG1P19174 1290 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 NUBP1P53384 320 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 MXD4Q14582 209 aaPredicted RBP10.55□□□□□ -0.72
APTX-219ENST00000474658 FAM117BQ6P1L5 589 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 HERC6Q8IVU3 1022 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 MYOCDQ8IZQ8 938 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 KCTD17Q8N5Z5 321 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 SYT2Q8N9I0 419 aaPredicted RBP10.55□□□□□ -0.72
APTX-219ENST00000474658 RNF149Q8NC42 400 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 RASSF8Q8NHQ8 419 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 LINC01599Q8WXQ3 324 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 SYMPKQ92797 1274 aaKnown RBP10.55□□□□□ -0.72
APTX-219ENST00000474658 RUSC1Q9BVN2 902 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 FTHL17Q9BXU8 183 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 PBX4Q9BYU1 374 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 INO80BQ9C086 356 aaPredicted RBP10.55□□□□□ -0.72
APTX-219ENST00000474658 RCOR1Q9UKL0 485 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 MICAL3Q7RTP6 2002 aa10.55□□□□□ -0.72
APTX-219ENST00000474658 CUTAO60888 179 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 UPP2O95045 317 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 PLA2G4BP0C869 781 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 MYOGP15173 224 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 ANP32AP39687 249 aaKnown RBP10.54□□□□□ -0.72
APTX-219ENST00000474658 SLC12A3P55017 1021 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 PTENP60484 403 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 NUCB2P80303 420 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 CAPSQ13938 189 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 TFDP1Q14186 410 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 DHX8Q14562 1220 aaKnown RBP10.54□□□□□ -0.72
APTX-219ENST00000474658 DSC3Q14574 896 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 RINT1Q6NUQ1 792 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 C1orf186Q6ZWK4 172 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 SRGAP1Q7Z6B7 1085 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 KCNG4Q8TDN1 519 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 BSNDQ8WZ55 320 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 RAD54LQ92698 747 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 TOP1MTQ969P6 601 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 ADAM2Q99965 735 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 ZBED2Q9BTP6 218 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 PANK2Q9BZ23 570 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 TSPYL2Q9H2G4 693 aaPredicted RBP10.54□□□□□ -0.72
APTX-219ENST00000474658 MINDY3Q9H8M7 445 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 RGS18Q9NS28 235 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 BLOC1S4Q9NUP1 217 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 CCDC39Q9UFE4 941 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 MSRAQ9UJ68 235 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 PCDHA7Q9UN72 937 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 YBX2Q9Y2T7 364 aaKnown RBP10.54□□□□□ -0.72
APTX-219ENST00000474658 PCDHA11Q9Y5I1 949 aa10.54□□□□□ -0.72
APTX-219ENST00000474658 GBF1Q92538 1859 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 TRIOBPQ9H2D6 2365 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 NPHP3-ACAD11A0A0J9YXS1 232 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 DENND3A2RUS2 1198 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 TLL1O43897 1013 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 HIP1RO75146 1068 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 GJB5O95377 273 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 ZSCAN20P17040 1043 aaPredicted RBP10.53□□□□□ -0.72
APTX-219ENST00000474658 NCLP19338 710 aaKnown RBP10.53□□□□□ -0.72
APTX-219ENST00000474658 SFPQP23246 707 aaKnown RBP eCLIP10.53□□□□□ -0.72
APTX-219ENST00000474658 DNAJB2P25686 324 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 TXLNAP40222 546 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 PHKA2P46019 1235 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 ME1P48163 572 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 KRT85P78386 507 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 POU5F1BQ06416 359 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 RAD51AP2Q09MP3 1159 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 MCM6Q14566 821 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 RAB30Q15771 203 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 ARSHQ5FYA8 562 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 AXDND1Q5T1B0 1012 aaPredicted RBP10.53□□□□□ -0.72
APTX-219ENST00000474658 RRAGBQ5VZM2 374 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 SHC4Q6S5L8 630 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 CATSPER4Q7RTX7 472 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 DAW1Q8N136 415 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 TIFAQ96CG3 184 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 NKX2-4Q9H2Z4 354 aa10.53□□□□□ -0.72
APTX-219ENST00000474658 ATP6V1DQ9Y5K8 247 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms