RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 CHST12Q9NRB3 414 aa14.91□□□□□ -0.02
CPSF4-210ENST00000469897 DACT1Q9NYF0 836 aa14.91□□□□□ -0.02
CPSF4-210ENST00000469897 SPG21Q9NZD8 308 aa14.91□□□□□ -0.02
CPSF4-210ENST00000469897 LZTS1Q9Y250 596 aa14.91□□□□□ -0.02
CPSF4-210ENST00000469897 USP15Q9Y4E8 981 aaPredicted RBP14.91□□□□□ -0.02
CPSF4-210ENST00000469897 ARIH1Q9Y4X5 557 aaPredicted RBP14.91□□□□□ -0.02
CPSF4-210ENST00000469897 HIDE1A8MVS5 230 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 NT5C1B-RDH14C9J2C7 533 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 MARCH6O60337 910 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 PFKFB2O60825 505 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 CTDNEP1O95476 244 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 ATF7P17544 494 aaPredicted RBP14.9□□□□□ -0.02
CPSF4-210ENST00000469897 XBP1P17861 261 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 QARSP47897 775 aaKnown RBP14.9□□□□□ -0.02
CPSF4-210ENST00000469897 EARS2Q5JPH6 523 aaKnown RBP14.9□□□□□ -0.02
CPSF4-210ENST00000469897 LLGL2Q6P1M3 1020 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 NEK8Q86SG6 692 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 LRRC43Q8N309 656 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 HAS1Q92839 578 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 RPGRIP1Q96KN7 1286 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 FAM20AQ96MK3 541 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 NLRP4Q96MN2 994 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 CDCA3Q99618 268 aaPredicted RBP14.9□□□□□ -0.02
CPSF4-210ENST00000469897 INO80BQ9C086 356 aaPredicted RBP14.9□□□□□ -0.02
CPSF4-210ENST00000469897 KCNMB3Q9NPA1 279 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 NGRNQ9NPE2 291 aaKnown RBP14.9□□□□□ -0.02
CPSF4-210ENST00000469897 ENTPD7Q9NQZ7 604 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 CYP26B1Q9NR63 512 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 WRAP73Q9P2S5 460 aaPredicted RBP14.9□□□□□ -0.02
CPSF4-210ENST00000469897 VAV3Q9UKW4 847 aa14.9□□□□□ -0.02
CPSF4-210ENST00000469897 NEFLP07196 543 aa14.89□□□□□ -0.03
CPSF4-210ENST00000469897 TECP42680 631 aa14.89□□□□□ -0.03
CPSF4-210ENST00000469897 PHKA2P46019 1235 aa14.89□□□□□ -0.03
CPSF4-210ENST00000469897 PPP2R5CQ13362 524 aa14.89□□□□□ -0.03
CPSF4-210ENST00000469897 KCNC3Q14003 757 aa14.89□□□□□ -0.03
CPSF4-210ENST00000469897 HERC4Q5GLZ8 1057 aaPredicted RBP14.89□□□□□ -0.03
CPSF4-210ENST00000469897 ZNF410Q86VK4 478 aa14.89□□□□□ -0.03
CPSF4-210ENST00000469897 SLC39A11Q8N1S5 342 aa14.89□□□□□ -0.03
CPSF4-210ENST00000469897 NECAB1Q8N987 351 aa14.89□□□□□ -0.03
CPSF4-210ENST00000469897 LPPQ93052 612 aa14.89□□□□□ -0.03
CPSF4-210ENST00000469897 APOL5Q9BWW9 433 aa14.89□□□□□ -0.03
CPSF4-210ENST00000469897 S1PR5Q9H228 398 aa14.89□□□□□ -0.03
CPSF4-210ENST00000469897 RGL1Q9NZL6 768 aa14.89□□□□□ -0.03
CPSF4-210ENST00000469897 ORC3Q9UBD5 711 aaPredicted RBP14.89□□□□□ -0.03
CPSF4-210ENST00000469897 PIN4Q9Y237 131 aaKnown RBP14.89□□□□□ -0.03
CPSF4-210ENST00000469897 KAT6AQ92794 2004 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 LOC730098B7Z3J9 87 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 ZBTB39O15060 712 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 P4HBP07237 508 aaKnown RBP14.88□□□□□ -0.03
CPSF4-210ENST00000469897 SRGAP2CP0DJJ0 459 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 FDPSP14324 419 aaKnown RBP14.88□□□□□ -0.03
CPSF4-210ENST00000469897 SFPQP23246 707 aaKnown RBP eCLIP14.88□□□□□ -0.03
CPSF4-210ENST00000469897 PPM1AP35813 382 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 ALDH7A1P49419 539 aaKnown RBP14.88□□□□□ -0.03
CPSF4-210ENST00000469897 AK2P54819 239 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 BCAR1P56945 870 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 EPHA7Q15375 998 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 TWF2Q6IBS0 349 aaKnown RBP14.88□□□□□ -0.03
CPSF4-210ENST00000469897 TMEM184AQ6ZMB5 413 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 CATSPER4Q7RTX7 472 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 MRPL43Q8N983 215 aaKnown RBP14.88□□□□□ -0.03
CPSF4-210ENST00000469897 PRPF31Q8WWY3 499 aaKnown RBP14.88□□□□□ -0.03
CPSF4-210ENST00000469897 EDAQ92838 391 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 TMEM143Q96AN5 459 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 CEP170P1Q96L14 293 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 PHF7Q9BWX1 381 aaPredicted RBP14.88□□□□□ -0.03
CPSF4-210ENST00000469897 IFT122Q9HBG6 1241 aa14.88□□□□□ -0.03
CPSF4-210ENST00000469897 FAM205CA6NFA0 338 aa14.87□□□□□ -0.03
CPSF4-210ENST00000469897 MEIS3P2A8K0S8 358 aa14.87□□□□□ -0.03
CPSF4-210ENST00000469897 DKC1O60832 514 aaKnown RBP eCLIP14.87□□□□□ -0.03
CPSF4-210ENST00000469897 OFD1O75665 1012 aa14.87□□□□□ -0.03
CPSF4-210ENST00000469897 CXCL14O95715 111 aa14.87□□□□□ -0.03
CPSF4-210ENST00000469897 GCFC2P16383 781 aaKnown RBP14.87□□□□□ -0.03
CPSF4-210ENST00000469897 CA8P35219 290 aa14.87□□□□□ -0.03
CPSF4-210ENST00000469897 NR5A1Q13285 461 aa14.87□□□□□ -0.03
CPSF4-210ENST00000469897 CTTNQ14247 550 aaKnown RBP14.87□□□□□ -0.03
CPSF4-210ENST00000469897 NCAPH2Q6IBW4 605 aa14.87□□□□□ -0.03
CPSF4-210ENST00000469897 ANKRD54Q6NXT1 300 aa14.87□□□□□ -0.03
CPSF4-210ENST00000469897 HFE2Q6ZVN8 426 aa14.87□□□□□ -0.03
CPSF4-210ENST00000469897 SLC7A3Q8WY07 619 aa14.87□□□□□ -0.03
CPSF4-210ENST00000469897 DYDC2Q96IM9 177 aa14.87□□□□□ -0.03
CPSF4-210ENST00000469897 JPH2Q9BR39 696 aaPredicted RBP14.87□□□□□ -0.03
CPSF4-210ENST00000469897 TRAIPQ9BWF2 469 aa14.87□□□□□ -0.03
CPSF4-210ENST00000469897 MRPL9Q9BYD2 267 aaKnown RBP14.87□□□□□ -0.03
CPSF4-210ENST00000469897 BMP2KQ9NSY1 1161 aaPredicted RBP14.87□□□□□ -0.03
CPSF4-210ENST00000469897 STK36Q9NRP7 1315 aa14.87□□□□□ -0.03
CPSF4-210ENST00000469897 TBX3O15119 743 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 BAG4O95429 457 aaKnown RBP14.86□□□□□ -0.03
CPSF4-210ENST00000469897 SKIP12755 728 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 YWHABP31946 246 aaKnown RBP14.86□□□□□ -0.03
CPSF4-210ENST00000469897 POLGP54098 1239 aaPredicted RBP14.86□□□□□ -0.03
CPSF4-210ENST00000469897 ANKRD1Q15327 319 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 ME3Q16798 604 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 SYCE2Q6PIF2 218 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 OTUD6AQ7L8S5 288 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 TPH2Q8IWU9 490 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 C4orf19Q8IY42 314 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 SUSD6Q92537 303 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 WASF1Q92558 559 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms