RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 ELMSAN1Q6PJG2 1045 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 SLCO4C1Q6ZQN7 724 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 REC114Q7Z4M0 266 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 FBXO11Q86XK2 927 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 RIOX2Q8IUF8 465 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 TMEM192Q8IY95 271 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 KREMEN2Q8NCW0 462 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 FBXO27Q8NI29 283 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 ACER1Q8TDN7 264 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 WNT8BQ93098 351 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 ATG4CQ96DT6 458 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 SRRTQ9BXP5 876 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 EMILIN2Q9BXX0 1053 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 IRX2Q9BZI1 471 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 ZSWIM4Q9H7M6 989 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 EHMT1Q9H9B1 1298 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 CABP5Q9NP86 173 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 SIRPGQ9P1W8 387 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 NCDNQ9UBB6 729 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 SORCS3Q9UPU3 1222 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 MSRB2Q9Y3D2 182 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 USP15Q9Y4E8 981 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 R4GN57 208 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 COL4A3Q01955 1670 aa4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 PDS5AQ29RF7 1337 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-211ENST00000460558 KAT6AQ92794 2004 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 LINC01565O15544 149 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 PROS1P07225 676 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 AOC1P19801 751 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 CDC27P30260 824 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 STAT3P40763 770 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 MCAMP43121 646 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 PHKA1P46020 1223 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 HTRA4P83105 476 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 SEPT6Q14141 434 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 ATP2B3Q16720 1220 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 ABCB5Q2M3G0 1257 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 SEZ6Q53EL9 994 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 PSAPL1Q6NUJ1 521 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 LLGL2Q6P1M3 1020 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 LRSAM1Q6UWE0 723 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 ANKS3Q6ZW76 656 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 ARMCX2Q7L311 632 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 DTWD2Q8NBA8 298 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 FLCNQ8NFG4 579 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 CAGE1Q8TC20 777 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 GRIN3AQ8TCU5 1115 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 AFAP1L1Q8TED9 768 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 SECISBP2LQ93073 1101 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 YME1L1Q96TA2 773 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 RTP3Q9BQQ7 232 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 C11orf84Q9BUA3 381 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 NXF1Q9UBU9 619 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 PALD1Q9ULE6 856 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 ASTN1O14525 1302 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 PLXNA4Q9HCM2 1894 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 ADAMTS20P59510 1910 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 SPAG17Q6Q759 2223 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 ASXL3Q9C0F0 2248 aa4.87□□□□□ -1.63
ECHDC1-211ENST00000460558 ACACAQ13085 2346 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 TEP1Q99973 2627 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 DNAJC25-GNG10A0A024R161 153 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 K7ELQ4 463 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 DYNC1LI2O43237 492 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 BAG3O95817 575 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 AMHP03971 560 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 RB1P06400 928 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 IMPDH2P12268 514 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 CTNNB1P35222 781 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 ZNF165P49910 485 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 SHC2P98077 582 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 RPL6Q02878 288 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 PTPN11Q06124 597 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 TBC1D8BQ0IIM8 1120 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 RASGRF1Q13972 1273 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 CERKLQ49MI3 558 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 TNNI3KQ59H18 835 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 BEND3Q5T5X7 828 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 EGFLAMQ63HQ2 1017 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 SDE2Q6IQ49 451 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 KANK3Q6NY19 840 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 TATDN1Q6P1N9 297 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 LRRC8DQ7L1W4 858 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 JAZF1Q86VZ6 243 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 MAPKAPK5Q8IW41 473 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 CCDC146Q8IYE0 955 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 MYOCDQ8IZQ8 938 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 EFHBQ8N7U6 833 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 GOLGA6L1Q8N7Z2 621 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 TSPYL6Q8N831 410 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 FAM169BQ8N8A8 192 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 OR6P1Q8NGX9 317 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 SH3RF3Q8TEJ3 882 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 TGFBRAP1Q8WUH2 860 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 SUCLG2Q96I99 432 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 KRT82Q9NSB4 513 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 CLEC1BQ9P126 229 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 GDF2Q9UK05 429 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 PPT2Q9UMR5 302 aa4.86□□□□□ -1.63
ECHDC1-211ENST00000460558 Q9Y3F1 56 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms