RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ZC3H11AO75152 810 aaKnown RBP eCLIP19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 LMNAP02545 664 aaKnown RBP19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 DARSP14868 501 aaKnown RBP19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 MCM5P33992 734 aa19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 ADCY7P51828 1080 aa19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 POLGP54098 1239 aaPredicted RBP19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 PTPN14Q15678 1187 aa19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 PPP1R18Q6NYC8 613 aa19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 CCDC149Q6ZUS6 474 aa19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 OTOP3Q7RTS5 596 aa19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 TEX2Q8IWB9 1127 aa19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 LRRC2Q9BYS8 371 aa19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 SFXN1Q9H9B4 322 aa19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 SLC12A7Q9Y666 1083 aa19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 R4GN57 208 aa19.49■□□□□ 0.71
UBE2D4-209ENST00000454428 MAGEB2O15479 319 aa19.48■□□□□ 0.71
UBE2D4-209ENST00000454428 CSDE1O75534 798 aaKnown RBP19.48■□□□□ 0.71
UBE2D4-209ENST00000454428 GALTP07902 379 aa19.48■□□□□ 0.71
UBE2D4-209ENST00000454428 AP3B2Q13367 1082 aa19.48■□□□□ 0.71
UBE2D4-209ENST00000454428 GIT2Q14161 759 aa19.48■□□□□ 0.71
UBE2D4-209ENST00000454428 ZNF746Q6NUN9 644 aaPredicted RBP19.48■□□□□ 0.71
UBE2D4-209ENST00000454428 DGLUCYQ7Z3D6 616 aa19.48■□□□□ 0.71
UBE2D4-209ENST00000454428 MICU3Q86XE3 530 aa19.48■□□□□ 0.71
UBE2D4-209ENST00000454428 KIAA2013Q8IYS2 634 aa19.48■□□□□ 0.71
UBE2D4-209ENST00000454428 RSAD2Q8WXG1 361 aa19.48■□□□□ 0.71
UBE2D4-209ENST00000454428 NRDE2Q9H7Z3 1164 aa19.48■□□□□ 0.71
UBE2D4-209ENST00000454428 GABBR1Q9UBS5 961 aa19.48■□□□□ 0.71
UBE2D4-209ENST00000454428 FBXL21Q9UKT6 434 aa19.48■□□□□ 0.71
UBE2D4-209ENST00000454428 DOCK8Q8NF50 2099 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 GPR179Q6PRD1 2367 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 SMCO2A6NFE2 343 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 MEIS3P2A8K0S8 358 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 ZNF862O60290 1169 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 CYP3A4P08684 503 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 ZNF76P36508 570 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 CLCN4P51793 760 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 BMS1Q14692 1282 aaKnown RBP19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 LETM2Q2VYF4 491 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 LPPQ93052 612 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 MAP7D2Q96T17 732 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 SEMA4AQ9H3S1 761 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 TBC1D13Q9NVG8 400 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 DNAJB4Q9UDY4 337 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 CEP131Q9UPN4 1083 aa19.47■□□□□ 0.71
UBE2D4-209ENST00000454428 TPRP12270 2363 aaKnown RBP19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 LILRB3O75022 631 aa19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 PHKA2P46019 1235 aa19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 DRP2Q13474 957 aa19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 LONRF3Q496Y0 759 aa19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 SGMS1Q86VZ5 419 aa19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 SMAP1Q8IYB5 467 aaPredicted RBP19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 KCNG4Q8TDN1 519 aa19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 RIN2Q8WYP3 895 aaPredicted RBP19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 KLHL5Q96PQ7 755 aa19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 ZNF577Q9BSK1 485 aa19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 TRAIPQ9BWF2 469 aa19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 WNT16Q9UBV4 365 aa19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 PCDHA10Q9Y5I2 948 aa19.46■□□□□ 0.71
UBE2D4-209ENST00000454428 CFHP08603 1231 aa19.45■□□□□ 0.7
UBE2D4-209ENST00000454428 CNPP09543 421 aaKnown RBP19.45■□□□□ 0.7
UBE2D4-209ENST00000454428 SLC11A1P49279 550 aa19.45■□□□□ 0.7
UBE2D4-209ENST00000454428 JAKMIP3Q5VZ66 844 aa19.45■□□□□ 0.7
UBE2D4-209ENST00000454428 PPFIBP1Q86W92 1011 aa19.45■□□□□ 0.7
UBE2D4-209ENST00000454428 ZNF710Q8N1W2 664 aa19.45■□□□□ 0.7
UBE2D4-209ENST00000454428 TMEM87AQ8NBN3 555 aa19.45■□□□□ 0.7
UBE2D4-209ENST00000454428 TBC1D22BQ9NU19 505 aa19.45■□□□□ 0.7
UBE2D4-209ENST00000454428 BARHL2Q9NY43 387 aa19.45■□□□□ 0.7
UBE2D4-209ENST00000454428 DACT1Q9NYF0 836 aa19.45■□□□□ 0.7
UBE2D4-209ENST00000454428 DLGAP2Q9P1A6 1054 aa19.45■□□□□ 0.7
UBE2D4-209ENST00000454428 IGSF9Q9P2J2 1179 aa19.45■□□□□ 0.7
UBE2D4-209ENST00000454428 V9GY48 417 aaPredicted RBP19.45■□□□□ 0.7
UBE2D4-209ENST00000454428 CACNA1IQ9P0X4 2223 aa19.44■□□□□ 0.7
UBE2D4-209ENST00000454428 PSAPP07602 524 aa19.44■□□□□ 0.7
UBE2D4-209ENST00000454428 TMOD1P28289 359 aa19.44■□□□□ 0.7
UBE2D4-209ENST00000454428 UGCGQ16739 394 aa19.44■□□□□ 0.7
UBE2D4-209ENST00000454428 C15orf39Q6ZRI6 1047 aa19.44■□□□□ 0.7
UBE2D4-209ENST00000454428 ZNF280BQ86YH2 543 aa19.44■□□□□ 0.7
UBE2D4-209ENST00000454428 DLL3Q9NYJ7 618 aa19.44■□□□□ 0.7
UBE2D4-209ENST00000454428 SLC27A2O14975 620 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 OFD1O75665 1012 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 KRT37O76014 449 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 OATP04181 439 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 PUM1Q14671 1186 aaKnown RBP eCLIP19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 NOMO2Q5JPE7 1267 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 APOA5Q6Q788 366 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 DCLK2Q8N568 766 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 EXOC6Q8TAG9 804 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 NLRP7Q8WX94 980 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 LENG9Q96B70 501 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 FAM167AQ96KS9 214 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 CEP89Q96ST8 783 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 LSG1Q9H089 658 aaKnown RBP19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 TBC1D17Q9HA65 648 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 CHST12Q9NRB3 414 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 CA14Q9ULX7 337 aa19.43■□□□□ 0.7
UBE2D4-209ENST00000454428 KLRC2P26717 231 aa19.42■□□□□ 0.7
UBE2D4-209ENST00000454428 AFF1P51825 1210 aaKnown RBP19.42■□□□□ 0.7
UBE2D4-209ENST00000454428 PRKCEQ02156 737 aa19.42■□□□□ 0.7
UBE2D4-209ENST00000454428 TARBP2Q15633 366 aaKnown RBP19.42■□□□□ 0.7
UBE2D4-209ENST00000454428 SLC44A3Q8N4M1 653 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms