RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 CCHCR1Q8TD31 782 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 UBASH3BQ8TF42 649 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 IRGQQ8WZA9 623 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 P3H4Q92791 437 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 RSRC1Q96IZ7 334 aaKnown RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 IWS1Q96ST2 819 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 MPHOSPH9Q99550 1183 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 SSBP4Q9BWG4 385 aaPredicted RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 BHMT2Q9H2M3 363 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 GSX1Q9H4S2 264 aaPredicted RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 BICC1Q9H694 974 aaKnown RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 PDE11AQ9HCR9 933 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 SLC40A1Q9NP59 571 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 SLC5A4Q9NY91 659 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 VPS18Q9P253 973 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 WDR35Q9P2L0 1181 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 ATXN10Q9UBB4 475 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 HDAC6Q9UBN7 1215 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 DKK3Q9UBP4 350 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 NDOR1Q9UHB4 597 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 NRBP1Q9UHY1 535 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 AKT3Q9Y243 479 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 C15orf41Q9Y2V0 281 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 TNPO3Q9Y5L0 923 aaKnown RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 MRFAP1Q9Y605 127 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 CAPN7Q9Y6W3 813 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 KNDC1Q76NI1 1749 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 CEMIPQ8WUJ3 1361 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 ADGRL2O95490 1459 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 WDR33Q9C0J8 1336 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 PTPRTO14522 1441 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 A0A087WZG4 1122 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC162PA2VCL2 907 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 GOLGA6L19H0YKK7 550 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 MYO1FO00160 1098 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 NOP56O00567 594 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 KIF3BO15066 747 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 TTI1O43156 1089 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 GPR39O43194 453 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 PRPF3O43395 683 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 MYO1BO43795 1136 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 CREB3O43889 395 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 EFCAB14O75071 495 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 SKAP2O75563 359 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 MTRF1O75570 445 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 LUC7L3O95232 432 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 EPB41P11171 864 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 ADH5P11766 374 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 KCNA2P16389 499 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZFXP17010 805 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 XBP1P17861 261 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 ENPP1P22413 925 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 MCM3P25205 808 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 IRAK1P51617 712 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 NEK2P51955 445 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 SOX4Q06945 474 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 TMEM62Q0P6H9 643 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 KIF5AQ12840 1032 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 STRN3Q13033 797 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 PPFIA1Q13136 1202 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 EIF2B5Q13144 721 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 MTMR1Q13613 665 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 CUL4BQ13620 913 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 AUHQ13825 339 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 TUBB2AQ13885 445 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 STAT4Q14765 748 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 LRRC41Q15345 812 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 SEPT7Q16181 437 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 NTRK3Q16288 839 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 TRIM71Q2Q1W2 868 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 PARP10Q53GL7 1025 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 RNF219Q5W0B1 726 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 TBC1D9BQ66K14 1250 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 PKN3Q6P5Z2 889 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 CYB5D1Q6P9G0 228 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 EXOC3L1Q86VI1 746 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 WDR75Q8IWA0 830 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 DTWD1Q8N5C7 304 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 TEX9Q8N6V9 391 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 SMG8Q8ND04 991 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 C1orf131Q8NDD1 294 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 NSUN7Q8NE18 718 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 CFAP61Q8NHU2 1237 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 PANK1Q8TE04 598 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 AFAP1L1Q8TED9 768 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 BTN2A2Q8WVV5 523 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 PMM1Q92871 262 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 ISL2Q96A47 359 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 SCLYQ96I15 445 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 TTC14Q96N46 770 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 SPAG5Q96R06 1193 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 CGREF1Q99674 301 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 TUBB2BQ9BVA1 445 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 NUP58Q9BVL2 599 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 PUS3Q9BZE2 481 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 FOXQ1Q9C009 403 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 TRIM4Q9C037 500 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 MKRN2Q9H000 416 aaKnown RBP3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 FAM204AQ9H8W3 233 aa3.99□□□□□ -1.77
HMGB3P8-201ENST00000449709 ANKZF1Q9H8Y5 726 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms