RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 MKS1Q9NXB0 559 aa6.16□□□□□ -1.42
LINC00440-201ENST00000446579 USP36Q9P275 1121 aaKnown RBP6.16□□□□□ -1.42
LINC00440-201ENST00000446579 NOC2LQ9Y3T9 749 aaKnown RBP6.16□□□□□ -1.42
LINC00440-201ENST00000446579 MRFAP1Q9Y605 127 aa6.16□□□□□ -1.42
LINC00440-201ENST00000446579 MROH6A6NGR9 719 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 VSTM5A8MXK1 200 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 DDX3XO00571 662 aaKnown RBP eCLIP6.15□□□□□ -1.42
LINC00440-201ENST00000446579 ERC2O15083 957 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 MATN3O15232 486 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 H2AFYO75367 372 aaKnown RBP6.15□□□□□ -1.42
LINC00440-201ENST00000446579 ZRANB2O95218 330 aaKnown RBP eCLIP6.15□□□□□ -1.42
LINC00440-201ENST00000446579 FSHBP01225 129 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 CD40P25942 277 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 SDHAP31040 664 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 GJA4P35212 333 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 SCAND1P57086 179 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 PURAQ00577 322 aaKnown RBP6.15□□□□□ -1.42
LINC00440-201ENST00000446579 MOGSQ13724 837 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 GBX1Q14549 363 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 EPHA7Q15375 998 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 SEC23AQ15436 765 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 PRAMEF18Q5VWM3 479 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 TMC5Q6UXY8 1006 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 EP400NLQ6ZTU2 488 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 FRMD7Q6ZUT3 714 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 CMIPQ8IY22 773 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 SVIPQ8NHG7 77 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 HSPBAP1Q96EW2 488 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 C16orf92Q96LL3 132 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 SAMD11Q96NU1 681 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 MS4A5Q9H3V2 200 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 CHST12Q9NRB3 414 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 CCM2LQ9NUG4 571 aaPredicted RBP6.15□□□□□ -1.42
LINC00440-201ENST00000446579 TELO2Q9Y4R8 837 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 ATP23Q9Y6H3 246 aa6.15□□□□□ -1.42
LINC00440-201ENST00000446579 GOLGA8AA7E2F4 631 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 GOLGA8BA8MQT2 603 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 SCDO00767 359 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 KCNK3O14649 394 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 KDM1AO60341 852 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 ENO2P09104 434 aaPredicted RBP6.14□□□□□ -1.43
LINC00440-201ENST00000446579 TRIM27P14373 513 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 ZNF20P17024 532 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 ZNF28P17035 718 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 PTX3P26022 381 aaPredicted RBP6.14□□□□□ -1.43
LINC00440-201ENST00000446579 IL13P35225 146 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 GLB1LQ6UWU2 654 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 PROSER1Q86XN7 944 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 AMOTL1Q8IY63 956 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 CLIP3Q96DZ5 547 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 CD244Q9BZW8 370 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 L2HGDHQ9H9P8 463 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 ANLNQ9NQW6 1124 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 DLL4Q9NR61 685 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 ZNF277Q9NRM2 450 aaPredicted RBP6.14□□□□□ -1.43
LINC00440-201ENST00000446579 SRRDQ9UH36 339 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 ZBTB21Q9ULJ3 1066 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 WASF3Q9UPY6 502 aa6.14□□□□□ -1.43
LINC00440-201ENST00000446579 KLHL33A6NCF5 533 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 AKAP5P24588 427 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 VPS72Q15906 364 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 SYCP2LQ5T4T6 812 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 EFCAB2Q5VUJ9 269 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 BTBD8Q5XKL5 378 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 CYB5RLQ6IPT4 315 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 LIMS2Q7Z4I7 341 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 TTC9BQ8N6N2 239 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 DTX3Q8N9I9 347 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 TXNDC5Q8NBS9 432 aaKnown RBP6.13□□□□□ -1.43
LINC00440-201ENST00000446579 RUNDC1Q96C34 613 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 LCORQ96JN0 433 aaPredicted RBP6.13□□□□□ -1.43
LINC00440-201ENST00000446579 ZSWIM3Q96MP5 696 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 SARGQ9BW04 601 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 ST6GALNAC2Q9UJ37 374 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 CROTQ9UKG9 612 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 COMMD10Q9Y6G5 202 aa6.13□□□□□ -1.43
LINC00440-201ENST00000446579 C9orf118A6NHY6 69 aa6.12□□□□□ -1.43
LINC00440-201ENST00000446579 CYP1A1P04798 512 aaPredicted RBP6.12□□□□□ -1.43
LINC00440-201ENST00000446579 CHGBP05060 677 aa6.12□□□□□ -1.43
LINC00440-201ENST00000446579 ENPP1P22413 925 aa6.12□□□□□ -1.43
LINC00440-201ENST00000446579 MTNR1BP49286 362 aa6.12□□□□□ -1.43
LINC00440-201ENST00000446579 MLLT6P55198 1093 aaPredicted RBP6.12□□□□□ -1.43
LINC00440-201ENST00000446579 FSCN1Q16658 493 aaKnown RBP6.12□□□□□ -1.43
LINC00440-201ENST00000446579 RRP12Q5JTH9 1297 aaKnown RBP6.12□□□□□ -1.43
LINC00440-201ENST00000446579 CATSPEREQ5SY80 951 aa6.12□□□□□ -1.43
LINC00440-201ENST00000446579 CD276Q5ZPR3 534 aa6.12□□□□□ -1.43
LINC00440-201ENST00000446579 SLC4A10Q6U841 1118 aa6.12□□□□□ -1.43
LINC00440-201ENST00000446579 B3GNT9Q6UX72 402 aa6.12□□□□□ -1.43
LINC00440-201ENST00000446579 NME9Q86XW9 330 aa6.12□□□□□ -1.43
LINC00440-201ENST00000446579 SLC16A11Q8NCK7 471 aa6.12□□□□□ -1.43
LINC00440-201ENST00000446579 ZNF496Q96IT1 587 aaPredicted RBP6.12□□□□□ -1.43
LINC00440-201ENST00000446579 TEKT5Q96M29 485 aa6.12□□□□□ -1.43
LINC00440-201ENST00000446579 TMEM168Q9H0V1 697 aa6.12□□□□□ -1.43
LINC00440-201ENST00000446579 RBPJLQ9UBG7 517 aa6.12□□□□□ -1.43
LINC00440-201ENST00000446579 LCHNA4D1U4 455 aa6.11□□□□□ -1.43
LINC00440-201ENST00000446579 FAM90A27PA6NNH2 459 aa6.11□□□□□ -1.43
LINC00440-201ENST00000446579 ACOT7O00154 380 aa6.11□□□□□ -1.43
LINC00440-201ENST00000446579 XPOTO43592 962 aaKnown RBP6.11□□□□□ -1.43
LINC00440-201ENST00000446579 IL33O95760 270 aa6.11□□□□□ -1.43
LINC00440-201ENST00000446579 C4BPAP04003 597 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms