RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 SHTN1A0MZ66 631 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 MROH6A6NGR9 719 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 KCNC1P48547 511 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 MRPS9P82933 396 aaKnown RBP6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 TTF1Q15361 905 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 PTPN21Q16825 1174 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 ZNF827Q17R98 1081 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 LCNL1Q6ZST4 164 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 GPR155Q7Z3F1 870 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 REXO1L1PQ8IX06 675 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 RAVER1Q8IY67 606 aaKnown RBP6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 TSPEARQ8WU66 669 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 RSAD2Q8WXG1 361 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 DYDC2Q96IM9 177 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 RAX2Q96IS3 184 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 LCORQ96JN0 433 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 FDXACB1Q9BRP7 624 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 CARD11Q9BXL7 1154 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 SLC13A1Q9BZW2 595 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 DNAJC28Q9NX36 388 aa6.12□□□□□ -1.43
HMGB3P6-201ENST00000444896 MAFGO15525 162 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 SEC24DO94855 1032 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 HMGCRP04035 888 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 GPR15P49685 360 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 NEK2P51955 445 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 MCL1Q07820 350 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 PPARAQ07869 468 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 ODF1Q14990 250 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 PCOLCEQ15113 449 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 MUM1Q2TAK8 710 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 IFNL2Q8IZJ0 200 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 MARCH10Q8NA82 808 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 SYT8Q8NBV8 401 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 OR14C36Q8NHC7 312 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 HIST1H2AHQ96KK5 128 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 CEP89Q96ST8 783 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 HIST1H2AJQ99878 128 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 BARX1Q9HBU1 254 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 LUC7LQ9NQ29 371 aaKnown RBP6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 ZNF277Q9NRM2 450 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 POLR3BQ9NW08 1133 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 DPP7Q9UHL4 492 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 DNAI1Q9UI46 699 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 CDY2AQ9Y6F7 541 aa6.11□□□□□ -1.43
HMGB3P6-201ENST00000444896 C2orf78A6NCI8 922 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 CFBP00751 764 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 HNRNPLP14866 589 aaKnown RBP eCLIP6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 AGXTP21549 392 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 KRT85P78386 507 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 CDK17Q00537 523 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 CD69Q07108 199 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 USP10Q14694 798 aaKnown RBP6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 TBR1Q16650 682 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 NT5DC1Q5TFE4 455 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 AUTS2Q8WXX7 1259 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 JADE3Q92613 823 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 SLC2A13Q96QE2 648 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 OSBPL6Q9BZF3 934 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 KIAA1683Q9H0B3 1180 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 MKS1Q9NXB0 559 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 VWA7Q9Y334 891 aa6.1□□□□□ -1.43
HMGB3P6-201ENST00000444896 B4GALT3O60512 393 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 INHBBP09529 407 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 OSMP13725 252 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 MRE11P49959 708 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 RRADP55042 308 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 ADAM15Q13444 863 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 CCDC178Q5BJE1 867 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 ODR4Q5SWX8 454 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 ERICH6BQ5W0A0 696 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 KLHDC10Q6PID8 442 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 ZDHHC14Q8IZN3 488 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 CHMP4CQ96CF2 233 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 WDR92Q96MX6 357 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 KCNC2Q96PR1 638 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 IFT122Q9HBG6 1241 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 PARD6AQ9NPB6 346 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 SYNPO2Q9UMS6 1093 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 CTDP1Q9Y5B0 961 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 GPR45Q9Y5Y3 372 aa6.09□□□□□ -1.43
HMGB3P6-201ENST00000444896 A0A1W2PR48 441 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 LY86O95711 162 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 S100BP04271 92 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 GAAP10253 952 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 MTHFD2P13995 350 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 GJA9P57773 515 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 KIAA2012Q0VF49 1180 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 SPIDRQ14159 915 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 FBLN7Q53RD9 439 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 AGBL4Q5VU57 503 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 SPOCD1Q6ZMY3 1216 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 ZBTB46Q86UZ6 589 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 FAM124AQ86V42 546 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 KRTAP1-3Q8IUG1 177 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 KBTBD2Q8IY47 623 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 AMOTL1Q8IY63 956 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 RTKN2Q8IZC4 609 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 PIK3C3Q8NEB9 887 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 HOOK2Q96ED9 719 aa6.08□□□□□ -1.44
HMGB3P6-201ENST00000444896 KLHL42Q9P2K6 505 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms