RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 CCDC181Q5TID7 509 aa17.69■□□□□ 0.42
PIKFYVE-206ENST00000443896 VIPAS39Q9H9C1 493 aa17.69■□□□□ 0.42
PIKFYVE-206ENST00000443896 NAGPAQ9UK23 515 aa17.69■□□□□ 0.42
PIKFYVE-206ENST00000443896 CAPN7Q9Y6W3 813 aa17.69■□□□□ 0.42
PIKFYVE-206ENST00000443896 MYH11P35749 1972 aa17.69■□□□□ 0.42
PIKFYVE-206ENST00000443896 PAFAH1B1P43034 410 aa17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 MTMR1Q13613 665 aa17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 MEI1Q5TIA1 1274 aa17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 CCNI2Q6ZMN8 369 aaPredicted RBP17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 CEP89Q96ST8 783 aa17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 FLOT1O75955 427 aa17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 LYPLA2O95372 231 aa17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 MAPTP10636 758 aaKnown RBP17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 VCAM1P19320 739 aa17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 PAX7P23759 505 aa17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 MYBPC2Q14324 1141 aa17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 SWT1Q5T5J6 900 aaKnown RBP17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 EGFL6Q8IUX8 553 aa17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 AFAP1L1Q8TED9 768 aa17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 HOMER2Q9NSB8 354 aa17.68■□□□□ 0.42
PIKFYVE-206ENST00000443896 CYP2J2P51589 502 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 GJB7Q6PEY0 223 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 SGSM3Q96HU1 749 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 CCDC189A1A4V9 331 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 GRID2IPA4D2P6 1211 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 SKAP2O75563 359 aaPredicted RBP17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 RARRES1P49788 294 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 RPS6P62753 249 aaKnown RBP17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 PGM5Q15124 567 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 TAAR1Q96RJ0 339 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 TBC1D22BQ9NU19 505 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 SMARCAL1Q9NZC9 954 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 LARSQ9P2J5 1176 aaKnown RBP17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 PNMA2Q9UL42 364 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 NFKBIEO00221 500 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 FERP16591 822 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 QARSP47897 775 aaKnown RBP17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 MTMR2Q13614 643 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 CFAP221Q4G0U5 840 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 NAIF1Q69YI7 327 aaPredicted RBP17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 ALKBH5Q6P6C2 394 aaKnown RBP17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 TMEM174Q8WUU8 243 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 LRRC1Q9BTT6 524 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 EHD2Q9NZN4 543 aa17.67■□□□□ 0.42
PIKFYVE-206ENST00000443896 K7ENM7 598 aa17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 TULP1O00294 542 aaPredicted RBP17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 FTCDO95954 541 aa17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 ACTN3Q08043 901 aaPredicted RBP17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 CBWD6Q4V339 395 aa17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 CBWD3Q5JTY5 395 aa17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 CBWD5Q5RIA9 395 aa17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 MYBL2P10244 700 aa17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 EIF2AK2P19525 551 aaKnown RBP17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 STAT1P42224 750 aa17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 SPP2Q13103 211 aa17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 ALCAMQ13740 583 aa17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 SYCP3Q8IZU3 236 aa17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 N4BP2L2Q92802 583 aaPredicted RBP17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 ACBD3Q9H3P7 528 aa17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 RPAP3Q9H6T3 665 aaPredicted RBP17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 BRCA1P38398 1863 aaKnown RBP17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 VPS36Q86VN1 386 aa17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 STK33Q9BYT3 514 aa17.66■□□□□ 0.42
PIKFYVE-206ENST00000443896 F8VZ95 297 aa17.65■□□□□ 0.42
PIKFYVE-206ENST00000443896 BFSP1Q12934 665 aa17.65■□□□□ 0.42
PIKFYVE-206ENST00000443896 HDAC7Q8WUI4 952 aa17.65■□□□□ 0.42
PIKFYVE-206ENST00000443896 MS4A14Q96JA4 679 aa17.65■□□□□ 0.42
PIKFYVE-206ENST00000443896 TMEM206Q9H813 350 aa17.65■□□□□ 0.42
PIKFYVE-206ENST00000443896 MED4Q9NPJ6 270 aa17.65■□□□□ 0.42
PIKFYVE-206ENST00000443896 ASTN2O75129 1339 aaPredicted RBP17.65■□□□□ 0.42
PIKFYVE-206ENST00000443896 ZBED4O75132 1171 aa17.65■□□□□ 0.42
PIKFYVE-206ENST00000443896 SOX5P35711 763 aa17.65■□□□□ 0.42
PIKFYVE-206ENST00000443896 DMGDHQ9UI17 866 aaKnown RBP17.65■□□□□ 0.42
PIKFYVE-206ENST00000443896 DAAM1Q9Y4D1 1078 aa17.65■□□□□ 0.42
PIKFYVE-206ENST00000443896 EXOC3O60645 756 aa17.64■□□□□ 0.42
PIKFYVE-206ENST00000443896 GFPT2O94808 682 aa17.64■□□□□ 0.42
PIKFYVE-206ENST00000443896 TRIM49P0CI25 452 aa17.64■□□□□ 0.42
PIKFYVE-206ENST00000443896 TRIM49CP0CI26 452 aa17.64■□□□□ 0.42
PIKFYVE-206ENST00000443896 FDX1P10109 184 aa17.64■□□□□ 0.42
PIKFYVE-206ENST00000443896 PLS3P13797 630 aa17.64■□□□□ 0.42
PIKFYVE-206ENST00000443896 MAEAQ7L5Y9 396 aa17.64■□□□□ 0.42
PIKFYVE-206ENST00000443896 MICALL2Q8IY33 904 aa17.64■□□□□ 0.42
PIKFYVE-206ENST00000443896 OLIG1Q8TAK6 271 aa17.64■□□□□ 0.42
PIKFYVE-206ENST00000443896 PXMP2Q9NR77 195 aa17.64■□□□□ 0.42
PIKFYVE-206ENST00000443896 RBM12Q9NTZ6 932 aaKnown RBP17.64■□□□□ 0.42
PIKFYVE-206ENST00000443896 HACL1Q9UJ83 578 aa17.64■□□□□ 0.42
PIKFYVE-206ENST00000443896 INTUQ9ULD6 942 aa17.64■□□□□ 0.42
PIKFYVE-206ENST00000443896 DDX3XO00571 662 aaKnown RBP eCLIP17.64■□□□□ 0.412e-10■■■■■ 37.8
PIKFYVE-206ENST00000443896 EVI5O60447 810 aa17.64■□□□□ 0.41
PIKFYVE-206ENST00000443896 YWHABP31946 246 aaKnown RBP17.64■□□□□ 0.41
PIKFYVE-206ENST00000443896 MATR3P43243 847 aaKnown RBP eCLIP17.64■□□□□ 0.411e-6■■■■■ 28.5
PIKFYVE-206ENST00000443896 AARSP49588 968 aaKnown RBP eCLIP17.64■□□□□ 0.41
PIKFYVE-206ENST00000443896 IFI16Q16666 785 aaKnown RBP17.64■□□□□ 0.41
PIKFYVE-206ENST00000443896 SAMD7Q7Z3H4 446 aa17.64■□□□□ 0.41
PIKFYVE-206ENST00000443896 C12orf56Q8IXR9 622 aa17.64■□□□□ 0.41
PIKFYVE-206ENST00000443896 C4orf19Q8IY42 314 aa17.64■□□□□ 0.41
PIKFYVE-206ENST00000443896 BCAS4Q8TDM0 211 aa17.64■□□□□ 0.41
PIKFYVE-206ENST00000443896 AENQ8WTP8 325 aaKnown RBP17.64■□□□□ 0.41
PIKFYVE-206ENST00000443896 PDCD2LQ9BRP1 358 aa17.64■□□□□ 0.41
PIKFYVE-206ENST00000443896 TIPINQ9BVW5 301 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms