RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 DNAJC19Q96DA6 116 aa16.37■□□□□ 0.21
CPNE1-215ENST00000437100 DRC1Q96MC2 740 aa16.37■□□□□ 0.21
CPNE1-215ENST00000437100 NLRP4Q96MN2 994 aa16.37■□□□□ 0.21
CPNE1-215ENST00000437100 PPP1R16BQ96T49 567 aa16.37■□□□□ 0.21
CPNE1-215ENST00000437100 LBHD1Q9BQE6 289 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-215ENST00000437100 REEP2Q9BRK0 252 aa16.37■□□□□ 0.21
CPNE1-215ENST00000437100 PRO3102Q9H379 93 aa16.37■□□□□ 0.21
CPNE1-215ENST00000437100 AGO3Q9H9G7 860 aaKnown RBP16.37■□□□□ 0.21
CPNE1-215ENST00000437100 C17orf75Q9HAS0 396 aa16.37■□□□□ 0.21
CPNE1-215ENST00000437100 IL23AQ9NPF7 189 aa16.37■□□□□ 0.21
CPNE1-215ENST00000437100 A0A087WZ62 844 aa16.36■□□□□ 0.21
CPNE1-215ENST00000437100 FRMD3A2A2Y4 597 aa16.36■□□□□ 0.21
CPNE1-215ENST00000437100 GHRP10912 638 aa16.36■□□□□ 0.21
CPNE1-215ENST00000437100 EIF4BP23588 611 aaKnown RBP16.36■□□□□ 0.21
CPNE1-215ENST00000437100 NAMPTP43490 491 aa16.36■□□□□ 0.21
CPNE1-215ENST00000437100 PTENP60484 403 aa16.36■□□□□ 0.21
CPNE1-215ENST00000437100 TCTN1Q2MV58 587 aa16.36■□□□□ 0.21
CPNE1-215ENST00000437100 LONRF3Q496Y0 759 aa16.36■□□□□ 0.21
CPNE1-215ENST00000437100 RNF149Q8NC42 400 aa16.36■□□□□ 0.21
CPNE1-215ENST00000437100 NLRP7Q8WX94 980 aa16.36■□□□□ 0.21
CPNE1-215ENST00000437100 DDX12PQ92771 950 aa16.36■□□□□ 0.21
CPNE1-215ENST00000437100 ZNF668Q96K58 619 aaPredicted RBP16.36■□□□□ 0.21
CPNE1-215ENST00000437100 FDXACB1Q9BRP7 624 aaPredicted RBP16.36■□□□□ 0.21
CPNE1-215ENST00000437100 SERTAD1Q9UHV2 236 aa16.36■□□□□ 0.21
CPNE1-215ENST00000437100 GOLGA6L4A6NEF3 574 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 PLS3P13797 630 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 UBE2HP62256 183 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 CACNB1Q02641 598 aaPredicted RBP16.35■□□□□ 0.21
CPNE1-215ENST00000437100 FAM160A1Q05DH4 1040 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 DHX8Q14562 1220 aaKnown RBP16.35■□□□□ 0.21
CPNE1-215ENST00000437100 SRGAP1Q7Z6B7 1085 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 FAM228AQ86W67 206 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 SPIRE2Q8WWL2 714 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 GBP4Q96PP9 640 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 C7orf25Q9BPX7 421 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 NTPCRQ9BSD7 190 aaKnown RBP16.35■□□□□ 0.21
CPNE1-215ENST00000437100 GCOM2Q9BZD3 368 aaPredicted RBP16.35■□□□□ 0.21
CPNE1-215ENST00000437100 TRIM9Q9C026 710 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 MINDY3Q9H8M7 445 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 POLD4Q9HCU8 107 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 ERVK-5Q9HDB9 667 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 GINS2Q9Y248 185 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 NOC2LQ9Y3T9 749 aaKnown RBP16.35■□□□□ 0.21
CPNE1-215ENST00000437100 ADGRA3Q8IWK6 1321 aa16.35■□□□□ 0.21
CPNE1-215ENST00000437100 ZNF202O95125 648 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 LIG1P18858 919 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 CD52P31358 61 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 BMP8BP34820 402 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 PHKA2P46019 1235 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 NPTX2P47972 431 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 MBTD1Q05BQ5 628 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 RAD51AP2Q09MP3 1159 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 TFDP1Q14186 410 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 PPP2R5AQ15172 486 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 TMEM240Q5SV17 173 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 CNKSR3Q6P9H4 555 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 PSRC1Q6PGN9 363 aaPredicted RBP16.34■□□□□ 0.21
CPNE1-215ENST00000437100 FAM43BQ6ZT52 329 aaPredicted RBP16.34■□□□□ 0.21
CPNE1-215ENST00000437100 DEFB128Q7Z7B8 93 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 RPUSD2Q8IZ73 545 aaKnown RBP16.34■□□□□ 0.21
CPNE1-215ENST00000437100 PAGE5Q96GU1 130 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 FIZ1Q96SL8 496 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 IFIH1Q9BYX4 1025 aaKnown RBP16.34■□□□□ 0.21
CPNE1-215ENST00000437100 ARHGAP28Q9P2N2 729 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 SCN5AQ14524 2016 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 TET1Q8NFU7 2136 aa16.34■□□□□ 0.21
CPNE1-215ENST00000437100 PRPF40AO75400 957 aaKnown RBP16.33■□□□□ 0.2
CPNE1-215ENST00000437100 RPS6KA5O75582 802 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 SRGAP2CP0DJJ0 459 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 ACRP10323 421 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 DMP1Q13316 513 aaPredicted RBP16.33■□□□□ 0.2
CPNE1-215ENST00000437100 AMHR2Q16671 573 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 RASIP1Q5U651 963 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 KRBA2Q6ZNG9 492 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 DYMQ7RTS9 669 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 CEP57L1Q8IYX8 460 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 DBF4BQ8NFT6 615 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 STAMQ92783 540 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 APBB2Q92870 758 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.33■□□□□ 0.21e-12■■■■□ 22.3
CPNE1-215ENST00000437100 LRRC27Q9C0I9 530 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 CCDC113Q9H0I3 377 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 TMX1Q9H3N1 280 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 PARVGQ9HBI0 331 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 LMBRD1Q9NUN5 540 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 PADI3Q9ULW8 664 aa16.33■□□□□ 0.2
CPNE1-215ENST00000437100 RANBP2P49792 3224 aaKnown RBP16.32■□□□□ 0.2
CPNE1-215ENST00000437100 SFI1A8K8P3 1242 aa16.32■□□□□ 0.2
CPNE1-215ENST00000437100 GPR182O15218 404 aa16.32■□□□□ 0.2
CPNE1-215ENST00000437100 NR1I2O75469 434 aa16.32■□□□□ 0.2
CPNE1-215ENST00000437100 PEX3P56589 373 aa16.32■□□□□ 0.2
CPNE1-215ENST00000437100 AMPD3Q01432 767 aa16.32■□□□□ 0.2
CPNE1-215ENST00000437100 EHHADHQ08426 723 aa16.32■□□□□ 0.2
CPNE1-215ENST00000437100 PAK2Q13177 524 aa16.32■□□□□ 0.2
CPNE1-215ENST00000437100 PCBP1Q15365 356 aaKnown RBP eCLIP16.32■□□□□ 0.22e-19■□□□□ 8.2
CPNE1-215ENST00000437100 FAM187BQ17R55 369 aa16.32■□□□□ 0.2
CPNE1-215ENST00000437100 PPP4R3CPQ6ZMV5 832 aa16.32■□□□□ 0.2
CPNE1-215ENST00000437100 ZNF365Q70YC5 407 aa16.32■□□□□ 0.2
CPNE1-215ENST00000437100 GRAMD1CQ8IYS0 662 aa16.32■□□□□ 0.2
CPNE1-215ENST00000437100 LINC01599Q8WXQ3 324 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms