RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 ZNF804BA4D1E1 1349 aa6.11□□□□□ -1.43
RFC3-202ENST00000434425 CEP290O15078 2479 aa6.11□□□□□ -1.43
RFC3-202ENST00000434425 C17orf113A0A1B0GUU1 675 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 TSPY2A6NKD2 308 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 PHF20L1A8MW92 1017 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 M0R3H8 397 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 STAM2O75886 525 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 SMC2O95347 1197 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 MT-ND3P03897 115 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 TSPY3P0CV98 308 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 TSPY8P0CW00 308 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 RPS12P25398 132 aaKnown RBP6.1□□□□□ -1.43
RFC3-202ENST00000434425 STAT1P42224 750 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 ASMTP46597 345 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 SOX9P48436 509 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 ALDH5A1P51649 535 aaPredicted RBP6.1□□□□□ -1.43
RFC3-202ENST00000434425 KIF11P52732 1056 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 RIPK4P57078 832 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 IRX1P78414 480 aaPredicted RBP6.1□□□□□ -1.43
RFC3-202ENST00000434425 TSPY1Q01534 308 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 G3BP1Q13283 466 aaKnown RBP eCLIP6.1□□□□□ -1.43
RFC3-202ENST00000434425 SCARF1Q14162 830 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 GRM3Q14832 879 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 SYCP1Q15431 976 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 CCNG2Q16589 344 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 KRT24Q2M2I5 525 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 PRAMEF18Q5VWM3 479 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 WWC2Q6AWC2 1192 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 TRIM68Q6AZZ1 485 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 RASAL3Q86YV0 1011 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 EPHX4Q8IUS5 362 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 SLC41A1Q8IVJ1 513 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 FAM186BQ8IYM0 893 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 KRT222Q8N1A0 295 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 ZNF619Q8N2I2 560 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 TBC1D16Q8TBP0 767 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 ZNF296Q8WUU4 475 aaPredicted RBP6.1□□□□□ -1.43
RFC3-202ENST00000434425 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.1□□□□□ -1.43
RFC3-202ENST00000434425 KCTD13Q8WZ19 329 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 HDAC2Q92769 488 aaKnown RBP6.1□□□□□ -1.43
RFC3-202ENST00000434425 TNPO1Q92973 898 aaKnown RBP6.1□□□□□ -1.43
RFC3-202ENST00000434425 CNDP2Q96KP4 475 aaKnown RBP6.1□□□□□ -1.43
RFC3-202ENST00000434425 TNIP3Q96KP6 325 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 MFSD14AQ96MC6 490 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 PLEKHG4BQ96PX9 1271 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 MKNK1Q9BUB5 465 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 DNAI2Q9GZS0 605 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 NCOR1P1Q9H4R4 102 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 TRMT13Q9NUP7 481 aaKnown RBP6.1□□□□□ -1.43
RFC3-202ENST00000434425 ZNF358Q9NW07 568 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 RRN3Q9NYV6 651 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 GGA3Q9NZ52 723 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 PFDN2Q9UHV9 154 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 MAP4K5Q9Y4K4 846 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 DDX60Q8IY21 1712 aaKnown RBP6.1□□□□□ -1.43
RFC3-202ENST00000434425 LRRC37AA6NMS7 1700 aa6.1□□□□□ -1.43
RFC3-202ENST00000434425 KRBA1A5PL33 1030 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 PI4K2BG5E9Z4 385 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 H0Y626 953 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 UBE2Q2LH0YL09 131 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 SIAH2O43255 324 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 NMT2O60551 498 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 ZBED4O75132 1171 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 ZNF254O75437 659 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 MAFO75444 373 aaPredicted RBP6.09□□□□□ -1.43
RFC3-202ENST00000434425 SNX4O95219 450 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 GUCA1CO95843 209 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 DNTTP04053 509 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 GNAT2P19087 354 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 FSHRP23945 695 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 TMOD1P28289 359 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 GRK6P43250 576 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 WNT7BP56706 349 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 C21orf58P58505 322 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 RPS8P62241 208 aaKnown RBP6.09□□□□□ -1.43
RFC3-202ENST00000434425 ERVK-9P63128 1117 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 RELQ04864 619 aaPredicted RBP6.09□□□□□ -1.43
RFC3-202ENST00000434425 CCDC173Q0VFZ6 552 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 FKBP5Q13451 457 aaPredicted RBP6.09□□□□□ -1.43
RFC3-202ENST00000434425 SCARB2Q14108 478 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 SEMA3AQ14563 771 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 SSPNQ14714 243 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 OASLQ15646 514 aaKnown RBP6.09□□□□□ -1.43
RFC3-202ENST00000434425 CLPPQ16740 277 aaPredicted RBP6.09□□□□□ -1.43
RFC3-202ENST00000434425 DDR2Q16832 855 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 TBC1D25Q3MII6 688 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 CCDC152Q4G0S7 254 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 KRTCAP3Q53RY4 240 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 PERM1Q5SV97 790 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 GPR158Q5T848 1215 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 ANGEL2Q5VTE6 544 aaKnown RBP6.09□□□□□ -1.43
RFC3-202ENST00000434425 CEP135Q66GS9 1140 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 INTS8Q75QN2 995 aaKnown RBP6.09□□□□□ -1.43
RFC3-202ENST00000434425 SLC9B2Q86UD5 537 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 SLC7A5P1Q8MH63 180 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 EHBP1Q8NDI1 1231 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 CCDC148Q8NFR7 591 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 IPMKQ8NFU5 416 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 FAM76AQ8TAV0 307 aa6.09□□□□□ -1.43
RFC3-202ENST00000434425 PARD3BQ8TEW8 1205 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms