RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 SIK3Q9Y2K2 1263 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 TNPO2O14787 897 aaKnown RBP24.22■■□□□ 1.47
VSX1-205ENST00000429762 EPHB6O15197 1021 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 LGALS2P05162 132 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 TPM1P09493 284 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 GLRA2P23416 452 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 FAM186BQ8IYM0 893 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 RDH13Q8NBN7 331 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 SPIRE2Q8WWL2 714 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 SMARCAD1Q9H4L7 1026 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 DMAC2Q9NW81 257 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 USP20Q9Y2K6 914 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 ANKRD63C9JTQ0 380 aa24.21■■□□□ 1.47
VSX1-205ENST00000429762 SLC16A3O15427 465 aaKnown RBP24.21■■□□□ 1.47
VSX1-205ENST00000429762 TRIM14Q14142 442 aa24.21■■□□□ 1.47
VSX1-205ENST00000429762 NFIL3Q16649 462 aa24.21■■□□□ 1.47
VSX1-205ENST00000429762 LRRC71Q8N4P6 559 aa24.21■■□□□ 1.47
VSX1-205ENST00000429762 OR6J1Q8NGC5 347 aa24.21■■□□□ 1.47
VSX1-205ENST00000429762 USP6NLQ92738 828 aa24.21■■□□□ 1.47
VSX1-205ENST00000429762 CRACR2AQ9BSW2 395 aa24.21■■□□□ 1.47
VSX1-205ENST00000429762 RNPEPQ9H4A4 650 aa24.21■■□□□ 1.47
VSX1-205ENST00000429762 MMRN2Q9H8L6 949 aa24.21■■□□□ 1.47
VSX1-205ENST00000429762 FAM207AQ9NSI2 230 aaPredicted RBP24.21■■□□□ 1.47
VSX1-205ENST00000429762 TRMT1Q9NXH9 659 aaKnown RBP24.21■■□□□ 1.47
VSX1-205ENST00000429762 CA12O43570 354 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 TRIM21P19474 475 aaKnown RBP24.2■■□□□ 1.46
VSX1-205ENST00000429762 KRT9P35527 623 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 ARL2P36404 184 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 RFC5P40937 340 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 APBA1Q02410 837 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 KCNMA1Q12791 1236 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 KCNH2Q12809 1159 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 TCERG1LQ5VWI1 586 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 TAS1R3Q7RTX0 852 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 CCDC112Q8NEF3 446 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 PPTC7Q8NI37 304 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 PANX2Q96RD6 677 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 SUGCTQ9HAC7 445 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 AGPAT5Q9NUQ2 364 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 LRRIQ4A6NIV6 560 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 MAFO75444 373 aaPredicted RBP24.2■■□□□ 1.46
VSX1-205ENST00000429762 DUSP28Q4G0W2 176 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 CNGA4Q8IV77 575 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 HHIPL1Q96JK4 782 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 TTYH3Q9C0H2 523 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 C17orf75Q9HAS0 396 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 ABHD10Q9NUJ1 306 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 GJD2Q9UKL4 321 aa24.2■■□□□ 1.46
VSX1-205ENST00000429762 MGAMO43451 1857 aa24.19■■□□□ 1.46
VSX1-205ENST00000429762 NRDCO43847 1150 aa24.19■■□□□ 1.46
VSX1-205ENST00000429762 EXOC3O60645 756 aa24.19■■□□□ 1.46
VSX1-205ENST00000429762 PSMC2P35998 433 aaKnown RBP24.19■■□□□ 1.46
VSX1-205ENST00000429762 RTP1P59025 263 aa24.19■■□□□ 1.46
VSX1-205ENST00000429762 IGBP1P78318 339 aa24.19■■□□□ 1.46
VSX1-205ENST00000429762 MTF1Q14872 753 aa24.19■■□□□ 1.46
VSX1-205ENST00000429762 GPIHBP1Q8IV16 184 aa24.19■■□□□ 1.46
VSX1-205ENST00000429762 MAP4K3Q8IVH8 894 aa24.19■■□□□ 1.46
VSX1-205ENST00000429762 GOLGA5Q8TBA6 731 aa24.19■■□□□ 1.46
VSX1-205ENST00000429762 BORCS6Q96GS4 357 aa24.19■■□□□ 1.46
VSX1-205ENST00000429762 NTPCRQ9BSD7 190 aaKnown RBP24.19■■□□□ 1.46
VSX1-205ENST00000429762 SPTLC3Q9NUV7 552 aa24.19■■□□□ 1.46
VSX1-205ENST00000429762 SOWAHDA6NJG2 315 aa24.18■■□□□ 1.46
VSX1-205ENST00000429762 MKRN4PQ13434 485 aaPredicted RBP24.18■■□□□ 1.46
VSX1-205ENST00000429762 E4F1Q66K89 784 aaPredicted RBP24.18■■□□□ 1.46
VSX1-205ENST00000429762 GOLGA8IPA6NC78 632 aa24.18■■□□□ 1.46
VSX1-205ENST00000429762 GOLGA8JA6NMD2 632 aa24.18■■□□□ 1.46
VSX1-205ENST00000429762 HOXC6P09630 235 aa24.18■■□□□ 1.46
VSX1-205ENST00000429762 XRCC5P13010 732 aaKnown RBP24.18■■□□□ 1.46
VSX1-205ENST00000429762 RGS2P41220 211 aa24.18■■□□□ 1.46
VSX1-205ENST00000429762 IRX5P78411 483 aaPredicted RBP24.18■■□□□ 1.46
VSX1-205ENST00000429762 TNFAIP2Q03169 654 aa24.18■■□□□ 1.46
VSX1-205ENST00000429762 SLC39A4Q6P5W5 647 aa24.18■■□□□ 1.46
VSX1-205ENST00000429762 SLC17A8Q8NDX2 589 aa24.18■■□□□ 1.46
VSX1-205ENST00000429762 EMID1Q96A84 441 aaPredicted RBP24.18■■□□□ 1.46
VSX1-205ENST00000429762 LSM14BQ9BX40 385 aaKnown RBP24.18■■□□□ 1.46
VSX1-205ENST00000429762 HSPBP1Q9NZL4 362 aa24.18■■□□□ 1.46
VSX1-205ENST00000429762 ARHGAP28Q9P2N2 729 aa24.18■■□□□ 1.46
VSX1-205ENST00000429762 CAPN11Q9UMQ6 739 aa24.18■■□□□ 1.46
VSX1-205ENST00000429762 FRMD4BQ9Y2L6 1034 aa24.18■■□□□ 1.46
VSX1-205ENST00000429762 TULP1O00294 542 aaPredicted RBP24.17■■□□□ 1.46
VSX1-205ENST00000429762 CAPSQ13938 189 aa24.17■■□□□ 1.46
VSX1-205ENST00000429762 IQSEC1Q6DN90 963 aa24.17■■□□□ 1.46
VSX1-205ENST00000429762 DEPTORQ8TB45 409 aa24.17■■□□□ 1.46
VSX1-205ENST00000429762 ZNF668Q96K58 619 aaPredicted RBP24.17■■□□□ 1.46
VSX1-205ENST00000429762 METTL14Q9HCE5 456 aaKnown RBP24.17■■□□□ 1.46
VSX1-205ENST00000429762 ERAP1Q9NZ08 941 aa24.17■■□□□ 1.46
VSX1-205ENST00000429762 FAM184BQ9ULE4 1060 aa24.17■■□□□ 1.46
VSX1-205ENST00000429762 LUC7L2Q9Y383 392 aaKnown RBP24.17■■□□□ 1.46
VSX1-205ENST00000429762 AFPP02771 609 aaKnown RBP24.16■■□□□ 1.46
VSX1-205ENST00000429762 GJB1P08034 283 aa24.16■■□□□ 1.46
VSX1-205ENST00000429762 TRIM49P0CI25 452 aa24.16■■□□□ 1.46
VSX1-205ENST00000429762 TRIM49CP0CI26 452 aa24.16■■□□□ 1.46
VSX1-205ENST00000429762 ADSSP30520 456 aa24.16■■□□□ 1.46
VSX1-205ENST00000429762 OLFML2BQ68BL8 750 aa24.16■■□□□ 1.46
VSX1-205ENST00000429762 MSL3Q8N5Y2 521 aaKnown RBP24.16■■□□□ 1.46
VSX1-205ENST00000429762 PPP1R13LQ8WUF5 828 aa24.16■■□□□ 1.46
VSX1-205ENST00000429762 PRPF31Q8WWY3 499 aaKnown RBP24.16■■□□□ 1.46
VSX1-205ENST00000429762 SLC35C1Q96A29 364 aa24.16■■□□□ 1.46
VSX1-205ENST00000429762 SAAL1Q96ER3 474 aa24.16■■□□□ 1.46
VSX1-205ENST00000429762 CAPNS2Q96L46 248 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms