RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 VPS37CA5D8V6 355 aaPredicted RBP23.81■■□□□ 1.4
CPNE1-211ENST00000420363 UPP2O95045 317 aa23.81■■□□□ 1.4
CPNE1-211ENST00000420363 BMP15O95972 392 aa23.81■■□□□ 1.4
CPNE1-211ENST00000420363 STAG3L1P0CL83 205 aa23.81■■□□□ 1.4
CPNE1-211ENST00000420363 SARSP49591 514 aaKnown RBP23.81■■□□□ 1.4
CPNE1-211ENST00000420363 DSC3Q14574 896 aa23.81■■□□□ 1.4
CPNE1-211ENST00000420363 ARL6IP4Q66PJ3 421 aaKnown RBP23.81■■□□□ 1.4
CPNE1-211ENST00000420363 C1QTNF1Q9BXJ1 281 aa23.81■■□□□ 1.4
CPNE1-211ENST00000420363 XPNPEP1Q9NQW7 623 aa23.81■■□□□ 1.4
CPNE1-211ENST00000420363 RGS18Q9NS28 235 aa23.81■■□□□ 1.4
CPNE1-211ENST00000420363 ADGRA3Q8IWK6 1321 aa23.81■■□□□ 1.4
CPNE1-211ENST00000420363 DENND3A2RUS2 1198 aa23.8■■□□□ 1.4
CPNE1-211ENST00000420363 ASAP2O43150 1006 aa23.8■■□□□ 1.4
CPNE1-211ENST00000420363 MGEA5O60502 916 aa23.8■■□□□ 1.4
CPNE1-211ENST00000420363 SYT1P21579 422 aa23.8■■□□□ 1.4
CPNE1-211ENST00000420363 SFPQP23246 707 aaKnown RBP eCLIP23.8■■□□□ 1.48e-7■□□□□ 11.1
CPNE1-211ENST00000420363 DTHD1Q6ZMT9 781 aa23.8■■□□□ 1.4
CPNE1-211ENST00000420363 SLC24A5Q71RS6 500 aa23.8■■□□□ 1.4
CPNE1-211ENST00000420363 FBXO22Q8NEZ5 403 aa23.8■■□□□ 1.4
CPNE1-211ENST00000420363 PIGOQ8TEQ8 1089 aa23.8■■□□□ 1.4
CPNE1-211ENST00000420363 SAMD11Q96NU1 681 aa23.8■■□□□ 1.4
CPNE1-211ENST00000420363 ADAM2Q99965 735 aa23.8■■□□□ 1.4
CPNE1-211ENST00000420363 A0A087WZ62 844 aa23.79■■□□□ 1.4
CPNE1-211ENST00000420363 DGKIO75912 1065 aa23.79■■□□□ 1.4
CPNE1-211ENST00000420363 MXD4Q14582 209 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-211ENST00000420363 POTEGQ6S5H5 508 aa23.79■■□□□ 1.4
CPNE1-211ENST00000420363 FERMT3Q86UX7 667 aa23.79■■□□□ 1.4
CPNE1-211ENST00000420363 ZNF689Q96CS4 500 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-211ENST00000420363 NLRP4Q96MN2 994 aa23.79■■□□□ 1.4
CPNE1-211ENST00000420363 FDXACB1Q9BRP7 624 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-211ENST00000420363 C17orf80Q9BSJ5 609 aa23.79■■□□□ 1.4
CPNE1-211ENST00000420363 IFT122Q9HBG6 1241 aa23.79■■□□□ 1.4
CPNE1-211ENST00000420363 C9IYK1 514 aa23.78■■□□□ 1.4
CPNE1-211ENST00000420363 CCT6AP40227 531 aaKnown RBP23.78■■□□□ 1.4
CPNE1-211ENST00000420363 SNX29Q8TEQ0 813 aa23.78■■□□□ 1.4
CPNE1-211ENST00000420363 PRPF31Q8WWY3 499 aaKnown RBP23.78■■□□□ 1.4
CPNE1-211ENST00000420363 TMEM143Q96AN5 459 aa23.78■■□□□ 1.4
CPNE1-211ENST00000420363 ZNF668Q96K58 619 aaPredicted RBP23.78■■□□□ 1.4
CPNE1-211ENST00000420363 ELAC1Q9H777 363 aaKnown RBP23.78■■□□□ 1.4
CPNE1-211ENST00000420363 RAPGEFL1Q9UHV5 662 aa23.78■■□□□ 1.4
CPNE1-211ENST00000420363 ZSCAN20P17040 1043 aaPredicted RBP23.77■■□□□ 1.4
CPNE1-211ENST00000420363 LAMTOR4Q0VGL1 99 aa23.77■■□□□ 1.4
CPNE1-211ENST00000420363 PCBP1Q15365 356 aaKnown RBP eCLIP23.77■■□□□ 1.42e-19■□□□□ 8.2
CPNE1-211ENST00000420363 IL17AQ16552 155 aa23.77■■□□□ 1.4
CPNE1-211ENST00000420363 KRT79Q5XKE5 535 aa23.77■■□□□ 1.4
CPNE1-211ENST00000420363 SRGAP1Q7Z6B7 1085 aa23.77■■□□□ 1.4
CPNE1-211ENST00000420363 MCPH1Q8NEM0 835 aa23.77■■□□□ 1.4
CPNE1-211ENST00000420363 CHST12Q9NRB3 414 aa23.77■■□□□ 1.4
CPNE1-211ENST00000420363 BMP2KQ9NSY1 1161 aaPredicted RBP23.77■■□□□ 1.4
CPNE1-211ENST00000420363 RWDD3Q9Y3V2 267 aa23.77■■□□□ 1.4
CPNE1-211ENST00000420363 FAM189BP81408 668 aa23.76■■□□□ 1.39
CPNE1-211ENST00000420363 POU5F1BQ06416 359 aa23.76■■□□□ 1.39
CPNE1-211ENST00000420363 RESTQ13127 1097 aa23.76■■□□□ 1.39
CPNE1-211ENST00000420363 KSR1Q8IVT5 923 aa23.76■■□□□ 1.39
CPNE1-211ENST00000420363 CMTR2Q8IYT2 770 aaKnown RBP23.76■■□□□ 1.39
CPNE1-211ENST00000420363 KCTD17Q8N5Z5 321 aa23.76■■□□□ 1.39
CPNE1-211ENST00000420363 TRAIPQ9BWF2 469 aa23.76■■□□□ 1.39
CPNE1-211ENST00000420363 TMEM161AQ9NX61 479 aa23.76■■□□□ 1.39
CPNE1-211ENST00000420363 DACT1Q9NYF0 836 aa23.76■■□□□ 1.39
CPNE1-211ENST00000420363 LRFN2Q9ULH4 789 aa23.76■■□□□ 1.39
CPNE1-211ENST00000420363 FNDC1Q4ZHG4 1894 aaPredicted RBP23.76■■□□□ 1.39
CPNE1-211ENST00000420363 USO1O60763 962 aaKnown RBP23.75■■□□□ 1.39
CPNE1-211ENST00000420363 PDIA4P13667 645 aaKnown RBP23.75■■□□□ 1.39
CPNE1-211ENST00000420363 ARL2P36404 184 aa23.75■■□□□ 1.39
CPNE1-211ENST00000420363 PHKA2P46019 1235 aa23.75■■□□□ 1.39
CPNE1-211ENST00000420363 TFDP1Q14186 410 aa23.75■■□□□ 1.39
CPNE1-211ENST00000420363 PTPROQ16827 1216 aa23.75■■□□□ 1.39
CPNE1-211ENST00000420363 EPC2Q52LR7 807 aa23.75■■□□□ 1.39
CPNE1-211ENST00000420363 IFNLR1Q8IU57 520 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-211ENST00000420363 FIBCD1Q8N539 461 aa23.75■■□□□ 1.39
CPNE1-211ENST00000420363 NFKBIZQ9BYH8 718 aa23.75■■□□□ 1.39
CPNE1-211ENST00000420363 UBE2ZQ9H832 354 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-211ENST00000420363 MTMR6Q9Y217 621 aa23.75■■□□□ 1.39
CPNE1-211ENST00000420363 PCDHB7Q9Y5E2 793 aa23.75■■□□□ 1.39
CPNE1-211ENST00000420363 MYH15Q9Y2K3 1946 aa23.74■■□□□ 1.39
CPNE1-211ENST00000420363 ARHGEF35A5YM69 484 aa23.74■■□□□ 1.39
CPNE1-211ENST00000420363 SLC26A4O43511 780 aa23.74■■□□□ 1.39
CPNE1-211ENST00000420363 STX6O43752 255 aa23.74■■□□□ 1.39
CPNE1-211ENST00000420363 ECM1Q16610 540 aa23.74■■□□□ 1.39
CPNE1-211ENST00000420363 RNF149Q8NC42 400 aa23.74■■□□□ 1.39
CPNE1-211ENST00000420363 CLP1Q92989 425 aaKnown RBP23.74■■□□□ 1.39
CPNE1-211ENST00000420363 AK8Q96MA6 479 aa23.74■■□□□ 1.39
CPNE1-211ENST00000420363 KIAA1671Q9BY89 1806 aa23.74■■□□□ 1.39
CPNE1-211ENST00000420363 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-211ENST00000420363 VWA3AA6NCI4 1184 aa23.73■■□□□ 1.39
CPNE1-211ENST00000420363 PP2D1A8MPX8 630 aa23.73■■□□□ 1.39
CPNE1-211ENST00000420363 HOXA2O43364 376 aa23.73■■□□□ 1.39
CPNE1-211ENST00000420363 LINC00271P0C7V0 271 aa23.73■■□□□ 1.39
CPNE1-211ENST00000420363 FGFR4P22455 802 aa23.73■■□□□ 1.39
CPNE1-211ENST00000420363 PTENP60484 403 aa23.73■■□□□ 1.39
CPNE1-211ENST00000420363 BTG3Q14201 252 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-211ENST00000420363 HYIQ5T013 277 aa23.73■■□□□ 1.39
CPNE1-211ENST00000420363 CATSPER4Q7RTX7 472 aa23.73■■□□□ 1.39
CPNE1-211ENST00000420363 MRPL38Q96DV4 380 aaKnown RBP23.73■■□□□ 1.39
CPNE1-211ENST00000420363 MMTAG2Q9BU76 263 aaKnown RBP23.73■■□□□ 1.39
CPNE1-211ENST00000420363 POLR3FQ9H1D9 316 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-211ENST00000420363 ZSCAN16Q9H4T2 348 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-211ENST00000420363 EPHX3Q9H6B9 360 aa23.73■■□□□ 1.39
CPNE1-211ENST00000420363 FOXD4L1Q9NU39 408 aa23.73■■□□□ 1.39
CPNE1-211ENST00000420363 AGPAT5Q9NUQ2 364 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms