RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 CASP10Q92851 521 aa10.01□□□□□ -0.81
NIF3L1-206ENST00000416651 PPP1R16BQ96T49 567 aa10.01□□□□□ -0.81
NIF3L1-206ENST00000416651 PCYT2Q99447 389 aa10.01□□□□□ -0.81
NIF3L1-206ENST00000416651 FOXQ1Q9C009 403 aa10.01□□□□□ -0.81
NIF3L1-206ENST00000416651 LRRCC1Q9C099 1032 aa10.01□□□□□ -0.81
NIF3L1-206ENST00000416651 SEMA4AQ9H3S1 761 aa10.01□□□□□ -0.81
NIF3L1-206ENST00000416651 TBC1D17Q9HA65 648 aa10.01□□□□□ -0.81
NIF3L1-206ENST00000416651 CYP26B1Q9NR63 512 aa10.01□□□□□ -0.81
NIF3L1-206ENST00000416651 NOC2LQ9Y3T9 749 aaKnown RBP10.01□□□□□ -0.81
NIF3L1-206ENST00000416651 NEDD4P46934 1319 aa10.01□□□□□ -0.81
NIF3L1-206ENST00000416651 NRCAMQ92823 1304 aa10.01□□□□□ -0.81
NIF3L1-206ENST00000416651 ANKRD11Q6UB99 2663 aaPredicted RBP10□□□□□ -0.81
NIF3L1-206ENST00000416651 BAZ2BQ9UIF8 2168 aaKnown RBP10□□□□□ -0.81
NIF3L1-206ENST00000416651 C9IYK1 514 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 F12P00748 615 aaPredicted RBP10□□□□□ -0.81
NIF3L1-206ENST00000416651 STAG3L1P0CL83 205 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 MYBP10242 640 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 CCND2P30279 289 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 CA8P35219 290 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 TCF7P36402 384 aaPredicted RBP10□□□□□ -0.81
NIF3L1-206ENST00000416651 MTHFRP42898 656 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 PLCB3Q01970 1234 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 GHRHRQ02643 423 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 KIAA0319Q5VV43 1072 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 KIAA1841Q6NSI8 718 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 TMEM173Q86WV6 379 aaPredicted RBP10□□□□□ -0.81
NIF3L1-206ENST00000416651 TMEM151AQ8N4L1 468 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 PI4K2BQ8TCG2 481 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 COL26A1Q96A83 441 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 NECTIN4Q96NY8 510 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 CASD1Q96PB1 797 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 ADAM2Q99965 735 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 PNMA2Q9UL42 364 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 PCDHB7Q9Y5E2 793 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 TRPV2Q9Y5S1 764 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 IGSF9BQ9UPX0 1349 aa10□□□□□ -0.81
NIF3L1-206ENST00000416651 DHX16O60231 1041 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 TGFB3P10600 412 aa9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 INSRRP14616 1297 aa9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 NCLP19338 710 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 CTHP32929 405 aa9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 ITIH3Q06033 890 aa9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 PAK2Q13177 524 aa9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 TPRNQ4KMQ1 711 aa9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 GPATCH4Q5T3I0 446 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 TAF2Q6P1X5 1199 aa9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 KCNV1Q6PIU1 500 aa9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 KCNT2Q6UVM3 1135 aa9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 C1orf210Q8IVY1 113 aa9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 MRPL43Q8N983 215 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 PNMA1Q8ND90 353 aa9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 SLC22A17Q8WUG5 538 aa9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 INPP4AQ96PE3 977 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 CELF4Q9BZC1 486 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 GINS2Q9Y248 185 aa9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 MTF2Q9Y483 593 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 SETXQ7Z333 2677 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-206ENST00000416651 HMMRO75330 724 aa9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 ZIC2O95409 532 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 CXCL14O95715 111 aa9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 SRGAP2BP0DMP2 458 aa9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 PPM1JQ5JR12 505 aa9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 ATAT1Q5SQI0 421 aa9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 C6orf118Q5T5N4 469 aa9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 TSSK4Q6SA08 328 aa9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 ZNF589Q86UQ0 364 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 GPR152Q8TDT2 470 aa9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 BCL7CQ8WUZ0 217 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 FAM227BQ96M60 508 aa9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 FTHL17Q9BXU8 183 aa9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 SH2B1Q9NRF2 756 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 NCDNQ9UBB6 729 aa9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 ZNF215Q9UL58 517 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 LZTS1Q9Y250 596 aa9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 PCDHA1Q9Y5I3 950 aa9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.98□□□□□ -0.81
NIF3L1-206ENST00000416651 A0A0D9SFI3 127 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 METAP2P50579 478 aaKnown RBP eCLIP9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 TBC1D8BQ0IIM8 1120 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 NEDD9Q14511 834 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 PLCB4Q15147 1175 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 ALX1Q15699 326 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 LPAL2Q16609 132 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 PDE12Q6L8Q7 609 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 RSPH3Q86UC2 560 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 SLC39A11Q8N1S5 342 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 SLC44A3Q8N4M1 653 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 FAM174AQ8TBP5 190 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 MTMR8Q96EF0 704 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 TTC14Q96N46 770 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 MYADMQ96S97 322 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 RPP25Q9BUL9 199 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 VN1R3Q9BXE9 311 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 AMNQ9BXJ7 453 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 ZFAND3Q9H8U3 227 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 NGRNQ9NPE2 291 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 RGS18Q9NS28 235 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 CDV3Q9UKY7 258 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 USP18Q9UMW8 372 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 USTQ9Y2C2 406 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms