RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ETFBP38117 255 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 TRIM48Q8IWZ4 208 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 TTLL6Q8N841 843 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 CENPTQ96BT3 561 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 UNC45AQ9H3U1 944 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 MAP3K15Q6ZN16 1313 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 PRXQ9BXM0 1461 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 C5orf58C9J3I9 102 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 ALDH1A1P00352 501 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 PBLDP30039 288 aaPredicted RBP19.67■□□□□ 0.74
SHANK3-202ENST00000414786 BEST2Q8NFU1 509 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 DDX28Q9NUL7 540 aaKnown RBP19.67■□□□□ 0.74
SHANK3-202ENST00000414786 UBE4BO95155 1302 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 MAN1A2O60476 641 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 TCEA2Q15560 299 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 ELP3Q9H9T3 547 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 KDM5BQ9UGL1 1544 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 MKRN4PQ13434 485 aaPredicted RBP19.67■□□□□ 0.74
SHANK3-202ENST00000414786 RPAINQ86UA6 219 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 LCORLQ8N3X6 602 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 ARMC2Q8NEN0 867 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 PRR23D1E9PI22 279 aaPredicted RBP19.67■□□□□ 0.74
SHANK3-202ENST00000414786 PRR23D2P0DMB1 279 aaPredicted RBP19.67■□□□□ 0.74
SHANK3-202ENST00000414786 TCP1P17987 556 aaKnown RBP19.67■□□□□ 0.74
SHANK3-202ENST00000414786 MAPK9P45984 424 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 ZNF772Q68DY9 489 aaPredicted RBP19.67■□□□□ 0.74
SHANK3-202ENST00000414786 ZNF746Q6NUN9 644 aaPredicted RBP19.67■□□□□ 0.74
SHANK3-202ENST00000414786 SNX31Q8N9S9 440 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 SAAL1Q96ER3 474 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 KIF12Q96FN5 646 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 WDR11Q9BZH6 1224 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 ADNPQ9H2P0 1102 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 GCLMP48507 274 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 CENPUQ71F23 418 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 PPM1NQ8N819 430 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 ZNF274Q96GC6 653 aaPredicted RBP19.67■□□□□ 0.74
SHANK3-202ENST00000414786 STK17AQ9UEE5 414 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 MKL2Q9ULH7 1088 aa19.67■□□□□ 0.74
SHANK3-202ENST00000414786 SPTLC1O15269 473 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 GAP43P17677 238 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 EIF4A3P38919 411 aaKnown RBP19.66■□□□□ 0.74
SHANK3-202ENST00000414786 CENPKQ9BS16 269 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 A0A1W2PP64 1363 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 A8MXQ7 604 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 DR1Q01658 176 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 BHMT2Q9H2M3 363 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 CYBBP04839 570 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 HNRNPCP07910 306 aaKnown RBP eCLIP19.66■□□□□ 0.74
SHANK3-202ENST00000414786 PLCG1P19174 1290 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 ACAD11Q709F0 780 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 PIM2Q9P1W9 311 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 FBXW10Q5XX13 1052 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 SPATA2LQ8IUW3 424 aaPredicted RBP19.66■□□□□ 0.74
SHANK3-202ENST00000414786 P2RX5Q93086 422 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 PNKPQ96T60 521 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 TNPO2O14787 897 aaKnown RBP19.66■□□□□ 0.74
SHANK3-202ENST00000414786 SPATA1Q5VX52 437 aa19.66■□□□□ 0.74
SHANK3-202ENST00000414786 WEE1P30291 646 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 MYRIPQ8NFW9 859 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 PI4KBQ9UBF8 816 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 KBTBD13C9JR72 458 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 PRAMEF18Q5VWM3 479 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 ELAC2Q9BQ52 826 aaKnown RBP19.65■□□□□ 0.74
SHANK3-202ENST00000414786 PIN4Q9Y237 131 aaKnown RBP19.65■□□□□ 0.74
SHANK3-202ENST00000414786 DTNAQ9Y4J8 743 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 ZNF157P51786 506 aaPredicted RBP19.65■□□□□ 0.74
SHANK3-202ENST00000414786 MAPK6Q16659 721 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 PAN2Q504Q3 1202 aaKnown RBP19.65■□□□□ 0.74
SHANK3-202ENST00000414786 SDE2Q6IQ49 451 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 OR6J1Q8NGC5 347 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 SH2D3AQ9BRG2 576 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 ALDH6A1Q02252 535 aaKnown RBP19.65■□□□□ 0.74
SHANK3-202ENST00000414786 ANTXR1Q9H6X2 564 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 KANSL2Q9H9L4 492 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 RALGAPBQ86X10 1494 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 ANKRD65E5RJM6 399 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 PLIN5Q00G26 463 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 JADE3Q92613 823 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.65■□□□□ 0.74
SHANK3-202ENST00000414786 A6NNZ2 444 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 ZNF211Q13398 564 aaPredicted RBP19.65■□□□□ 0.74
SHANK3-202ENST00000414786 TUBB8Q3ZCM7 444 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 CHSY1Q86X52 802 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 PALMDQ9NP74 551 aa19.65■□□□□ 0.74
SHANK3-202ENST00000414786 MAP3K13O43283 966 aa19.64■□□□□ 0.74
SHANK3-202ENST00000414786 BTKQ06187 659 aa19.64■□□□□ 0.74
SHANK3-202ENST00000414786 BTBD6Q96KE9 485 aa19.64■□□□□ 0.74
SHANK3-202ENST00000414786 TRIM54Q9BYV2 358 aa19.64■□□□□ 0.74
SHANK3-202ENST00000414786 NHEJ1Q9H9Q4 299 aaPredicted RBP19.64■□□□□ 0.74
SHANK3-202ENST00000414786 HSPBP1Q9NZL4 362 aa19.64■□□□□ 0.74
SHANK3-202ENST00000414786 ZBTB1Q9Y2K1 713 aa19.64■□□□□ 0.74
SHANK3-202ENST00000414786 OCA2Q04671 838 aa19.64■□□□□ 0.74
SHANK3-202ENST00000414786 ARHGEF9O43307 516 aa19.64■□□□□ 0.73
SHANK3-202ENST00000414786 SLC25A41Q8N5S1 370 aa19.64■□□□□ 0.73
SHANK3-202ENST00000414786 OTUB1Q96FW1 271 aaPredicted RBP19.64■□□□□ 0.73
SHANK3-202ENST00000414786 APOL5Q9BWW9 433 aa19.64■□□□□ 0.73
SHANK3-202ENST00000414786 NDE1Q9NXR1 346 aa19.64■□□□□ 0.73
SHANK3-202ENST00000414786 TLR2O60603 784 aa19.64■□□□□ 0.73
SHANK3-202ENST00000414786 MZF1P28698 734 aaPredicted RBP19.64■□□□□ 0.73
SHANK3-202ENST00000414786 GPATCH4Q5T3I0 446 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms