RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 FGFR4P22455 802 aa24.83■■□□□ 1.57
PTCD3-203ENST00000409783 POU5F1BQ06416 359 aa24.83■■□□□ 1.57
PTCD3-203ENST00000409783 CAPSQ13938 189 aa24.83■■□□□ 1.57
PTCD3-203ENST00000409783 DSC3Q14574 896 aa24.83■■□□□ 1.57
PTCD3-203ENST00000409783 FAM43BQ6ZT52 329 aaPredicted RBP24.83■■□□□ 1.57
PTCD3-203ENST00000409783 C1orf186Q6ZWK4 172 aa24.83■■□□□ 1.57
PTCD3-203ENST00000409783 TMCO2Q7Z6W1 182 aaPredicted RBP24.83■■□□□ 1.57
PTCD3-203ENST00000409783 HERC6Q8IVU3 1022 aa24.83■■□□□ 1.57
PTCD3-203ENST00000409783 KCNG4Q8TDN1 519 aa24.83■■□□□ 1.57
PTCD3-203ENST00000409783 FTHL17Q9BXU8 183 aa24.83■■□□□ 1.57
PTCD3-203ENST00000409783 TSPYL2Q9H2G4 693 aaPredicted RBP24.83■■□□□ 1.57
PTCD3-203ENST00000409783 MINDY3Q9H8M7 445 aa24.83■■□□□ 1.57
PTCD3-203ENST00000409783 CUTAO60888 179 aa24.82■■□□□ 1.56
PTCD3-203ENST00000409783 PLA2G4BP0C869 781 aa24.82■■□□□ 1.56
PTCD3-203ENST00000409783 PBX2P40425 430 aa24.82■■□□□ 1.56
PTCD3-203ENST00000409783 NUCB2P80303 420 aa24.82■■□□□ 1.56
PTCD3-203ENST00000409783 ODR4Q5SWX8 454 aa24.82■■□□□ 1.56
PTCD3-203ENST00000409783 IFNLR1Q8IU57 520 aaPredicted RBP24.82■■□□□ 1.56
PTCD3-203ENST00000409783 DAW1Q8N136 415 aa24.82■■□□□ 1.56
PTCD3-203ENST00000409783 RNF149Q8NC42 400 aa24.82■■□□□ 1.56
PTCD3-203ENST00000409783 BSNDQ8WZ55 320 aa24.82■■□□□ 1.56
PTCD3-203ENST00000409783 PBX4Q9BYU1 374 aa24.82■■□□□ 1.56
PTCD3-203ENST00000409783 POLD4Q9HCU8 107 aa24.82■■□□□ 1.56
PTCD3-203ENST00000409783 A0A087X0B3 334 aa24.81■■□□□ 1.56
PTCD3-203ENST00000409783 ANP32AP39687 249 aaKnown RBP24.81■■□□□ 1.56
PTCD3-203ENST00000409783 RABGGTBP53611 331 aa24.81■■□□□ 1.56
PTCD3-203ENST00000409783 PTENP60484 403 aa24.81■■□□□ 1.56
PTCD3-203ENST00000409783 MAPK7Q13164 816 aa24.81■■□□□ 1.56
PTCD3-203ENST00000409783 FAM102BQ5T8I3 360 aa24.81■■□□□ 1.56
PTCD3-203ENST00000409783 SRGAP1Q7Z6B7 1085 aa24.81■■□□□ 1.56
PTCD3-203ENST00000409783 CRIPAKQ8N1N5 446 aa24.81■■□□□ 1.56
PTCD3-203ENST00000409783 PCDHA7Q9UN72 937 aa24.81■■□□□ 1.56
PTCD3-203ENST00000409783 AMHP03971 560 aa24.8■■□□□ 1.56
PTCD3-203ENST00000409783 KRT85P78386 507 aa24.8■■□□□ 1.56
PTCD3-203ENST00000409783 NAALADL2Q58DX5 795 aa24.8■■□□□ 1.56
PTCD3-203ENST00000409783 ARSHQ5FYA8 562 aa24.8■■□□□ 1.56
PTCD3-203ENST00000409783 SHC4Q6S5L8 630 aa24.8■■□□□ 1.56
PTCD3-203ENST00000409783 RAD54LQ92698 747 aa24.8■■□□□ 1.56
PTCD3-203ENST00000409783 TOP1MTQ969P6 601 aa24.8■■□□□ 1.56
PTCD3-203ENST00000409783 NFKBIZQ9BYH8 718 aa24.8■■□□□ 1.56
PTCD3-203ENST00000409783 INO80BQ9C086 356 aaPredicted RBP24.8■■□□□ 1.56
PTCD3-203ENST00000409783 YBX2Q9Y2T7 364 aaKnown RBP24.8■■□□□ 1.56
PTCD3-203ENST00000409783 ATP6V1DQ9Y5K8 247 aa24.8■■□□□ 1.56
PTCD3-203ENST00000409783 GJB5O95377 273 aa24.79■■□□□ 1.56
PTCD3-203ENST00000409783 GUCY2CP25092 1073 aa24.79■■□□□ 1.56
PTCD3-203ENST00000409783 TFDP1Q14186 410 aa24.79■■□□□ 1.56
PTCD3-203ENST00000409783 MYOCDQ8IZQ8 938 aa24.79■■□□□ 1.56
PTCD3-203ENST00000409783 LEO1Q8WVC0 666 aaPredicted RBP24.79■■□□□ 1.56
PTCD3-203ENST00000409783 ADAM2Q99965 735 aa24.79■■□□□ 1.56
PTCD3-203ENST00000409783 RGS18Q9NS28 235 aa24.79■■□□□ 1.56
PTCD3-203ENST00000409783 CCDC39Q9UFE4 941 aa24.79■■□□□ 1.56
PTCD3-203ENST00000409783 PCDHA11Q9Y5I1 949 aa24.79■■□□□ 1.56
PTCD3-203ENST00000409783 MYH11P35749 1972 aa24.79■■□□□ 1.56
PTCD3-203ENST00000409783 HIP1RO75146 1068 aa24.78■■□□□ 1.56
PTCD3-203ENST00000409783 SSBP05455 408 aaKnown RBP eCLIP24.78■■□□□ 1.56
PTCD3-203ENST00000409783 MYOGP15173 224 aa24.78■■□□□ 1.56
PTCD3-203ENST00000409783 DNAJB2P25686 324 aa24.78■■□□□ 1.56
PTCD3-203ENST00000409783 PHKA2P46019 1235 aa24.78■■□□□ 1.56
PTCD3-203ENST00000409783 MCM6Q14566 821 aa24.78■■□□□ 1.56
PTCD3-203ENST00000409783 GPR153Q6NV75 609 aa24.78■■□□□ 1.56
PTCD3-203ENST00000409783 KIFAP3Q92845 792 aa24.78■■□□□ 1.56
PTCD3-203ENST00000409783 SZT2Q5T011 3432 aa24.78■■□□□ 1.56
PTCD3-203ENST00000409783 COL4A6Q14031 1691 aa24.78■■□□□ 1.56
PTCD3-203ENST00000409783 C9IYK1 514 aa24.77■■□□□ 1.56
PTCD3-203ENST00000409783 SFPQP23246 707 aaKnown RBP eCLIP24.77■■□□□ 1.56
PTCD3-203ENST00000409783 TXLNAP40222 546 aa24.77■■□□□ 1.56
PTCD3-203ENST00000409783 ME1P48163 572 aa24.77■■□□□ 1.56
PTCD3-203ENST00000409783 MBTD1Q05BQ5 628 aa24.77■■□□□ 1.56
PTCD3-203ENST00000409783 CDCA2Q69YH5 1023 aaPredicted RBP24.77■■□□□ 1.56
PTCD3-203ENST00000409783 RASSF8Q8NHQ8 419 aa24.77■■□□□ 1.56
PTCD3-203ENST00000409783 LARP4BQ92615 738 aaKnown RBP24.77■■□□□ 1.56
PTCD3-203ENST00000409783 KCND2Q9NZV8 630 aa24.77■■□□□ 1.56
PTCD3-203ENST00000409783 STK17AQ9UEE5 414 aa24.77■■□□□ 1.56
PTCD3-203ENST00000409783 FAM189BP81408 668 aa24.76■■□□□ 1.55
PTCD3-203ENST00000409783 HTRA4P83105 476 aaPredicted RBP24.76■■□□□ 1.55
PTCD3-203ENST00000409783 RAB30Q15771 203 aa24.76■■□□□ 1.55
PTCD3-203ENST00000409783 AMHR2Q16671 573 aa24.76■■□□□ 1.55
PTCD3-203ENST00000409783 RRAGBQ5VZM2 374 aa24.76■■□□□ 1.55
PTCD3-203ENST00000409783 FAM117BQ6P1L5 589 aa24.76■■□□□ 1.55
PTCD3-203ENST00000409783 CATSPER4Q7RTX7 472 aa24.76■■□□□ 1.55
PTCD3-203ENST00000409783 SPATA32Q96LK8 384 aa24.76■■□□□ 1.55
PTCD3-203ENST00000409783 TIPINQ9BVW5 301 aa24.76■■□□□ 1.55
PTCD3-203ENST00000409783 PANK2Q9BZ23 570 aa24.76■■□□□ 1.55
PTCD3-203ENST00000409783 CIZ1Q9ULV3 898 aaPredicted RBP24.76■■□□□ 1.55
PTCD3-203ENST00000409783 NPHP3-ACAD11A0A0J9YXS1 232 aa24.75■■□□□ 1.55
PTCD3-203ENST00000409783 LRRIQ4A6NIV6 560 aa24.75■■□□□ 1.55
PTCD3-203ENST00000409783 NCLP19338 710 aaKnown RBP24.75■■□□□ 1.55
PTCD3-203ENST00000409783 HOXA11P31270 313 aaPredicted RBP24.75■■□□□ 1.55
PTCD3-203ENST00000409783 NAMPTP43490 491 aa24.75■■□□□ 1.55
PTCD3-203ENST00000409783 DHX8Q14562 1220 aaKnown RBP24.75■■□□□ 1.55
PTCD3-203ENST00000409783 RESP18Q5W5W9 173 aa24.75■■□□□ 1.55
PTCD3-203ENST00000409783 SLC24A5Q71RS6 500 aa24.75■■□□□ 1.55
PTCD3-203ENST00000409783 GPBP1Q86WP2 473 aa24.75■■□□□ 1.55
PTCD3-203ENST00000409783 CHST12Q9NRB3 414 aa24.75■■□□□ 1.55
PTCD3-203ENST00000409783 C1orf112Q9NSG2 853 aa24.75■■□□□ 1.55
PTCD3-203ENST00000409783 AGPAT5Q9NUQ2 364 aa24.75■■□□□ 1.55
PTCD3-203ENST00000409783 MSRAQ9UJ68 235 aa24.75■■□□□ 1.55
PTCD3-203ENST00000409783 ADGRA3Q8IWK6 1321 aa24.75■■□□□ 1.55
PTCD3-203ENST00000409783 CHD9Q3L8U1 2897 aa24.74■■□□□ 1.55
PTCD3-203ENST00000409783 DENND3A2RUS2 1198 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms