RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 HAPLN3Q96S86 360 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 CCSER1Q9C0I3 900 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 MAF1Q9H063 256 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 SUCLA2Q9P2R7 463 aaPredicted RBP13.77□□□□□ -0.21
HERC3-203ENST00000407637 CAPN9O14815 690 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 TMCC1O94876 653 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 LYNP07948 512 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 RPL13P26373 211 aaKnown RBP13.77□□□□□ -0.21
HERC3-203ENST00000407637 RPL21P46778 160 aaKnown RBP13.77□□□□□ -0.21
HERC3-203ENST00000407637 MKRN3Q13064 507 aaKnown RBP13.77□□□□□ -0.21
HERC3-203ENST00000407637 TNIP1Q15025 636 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 P3H1Q32P28 736 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 DCAF12L1Q5VU92 463 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 DSTYKQ6XUX3 929 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 ZNF571Q7Z3V5 609 aaPredicted RBP13.77□□□□□ -0.21
HERC3-203ENST00000407637 NT5DC3Q86UY8 548 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 CABP7Q86V35 215 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 CCDC25Q86WR0 208 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 DTX3LQ8TDB6 740 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 C7orf25Q9BPX7 421 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 NT5C3AQ9H0P0 336 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 SLC52A2Q9HAB3 445 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 CHMP2BQ9UQN3 213 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 COMMD3-BMI1R4GMX3 469 aa13.77□□□□□ -0.21
HERC3-203ENST00000407637 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.76□□□□□ -0.21
HERC3-203ENST00000407637 NEK3P51956 506 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 LIN52Q52LA3 116 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 C4orf50Q6ZRC1 276 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 TMTC3Q6ZXV5 915 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 CATIPQ7Z7H3 387 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 LCORLQ8N3X6 602 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 TUBGCP5Q96RT8 1024 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 PITPNM3Q9BZ71 974 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 NUP188Q5SRE5 1749 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 SCN11AQ9UI33 1791 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 RBM47A0AV96 593 aaKnown RBP13.76□□□□□ -0.21
HERC3-203ENST00000407637 KRT13P13646 458 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 MARK3P27448 753 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 PPP2R5BQ15173 497 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 METTL24Q5JXM2 366 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 DDX27Q96GQ7 796 aaKnown RBP13.76□□□□□ -0.21
HERC3-203ENST00000407637 DYDC2Q96IM9 177 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 PITPNM2Q9BZ72 1349 aa13.76□□□□□ -0.21
HERC3-203ENST00000407637 FAM196BA6NMK8 535 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 EYA4O95677 639 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 FGFR1OPO95684 399 aaKnown RBP13.75□□□□□ -0.21
HERC3-203ENST00000407637 SCG2P13521 617 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 BRAFP15056 766 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 TAC1P20366 129 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 FOXN2P32314 431 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 PHKA1P46020 1223 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 MAPK7Q13164 816 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 WDR72Q3MJ13 1102 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 IFIT1BQ5T764 474 aaKnown RBP13.75□□□□□ -0.21
HERC3-203ENST00000407637 ARHGAP27Q6ZUM4 889 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 SLFN11Q7Z7L1 901 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 SRBD1Q8N5C6 995 aaKnown RBP13.75□□□□□ -0.21
HERC3-203ENST00000407637 GLIS3Q8NEA6 775 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 C18orf8Q96DM3 657 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 HES6Q96HZ4 224 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 MAGEB18Q96M61 343 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 MIPEPQ99797 713 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 ZBTB3Q9H5J0 574 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 HSFX1Q9UBD0 423 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 MTRF1LQ9UGC7 380 aaKnown RBP13.75□□□□□ -0.21
HERC3-203ENST00000407637 FAM187AA6NFU0 413 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 TBX10O75333 385 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 ITGA2BP08514 1039 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 YARSP54577 528 aaKnown RBP13.75□□□□□ -0.21
HERC3-203ENST00000407637 PABPC4Q13310 644 aaKnown RBP eCLIP13.75□□□□□ -0.21
HERC3-203ENST00000407637 ZNF211Q13398 564 aaPredicted RBP13.75□□□□□ -0.21
HERC3-203ENST00000407637 KPNB1Q14974 876 aaKnown RBP13.75□□□□□ -0.21
HERC3-203ENST00000407637 LRRC41Q15345 812 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 ZRSR2Q15696 482 aaKnown RBP13.75□□□□□ -0.21
HERC3-203ENST00000407637 TXNRD1Q16881 649 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 OLFML2BQ68BL8 750 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 ALKBH5Q6P6C2 394 aaKnown RBP13.75□□□□□ -0.21
HERC3-203ENST00000407637 LENG1Q96BZ8 264 aaPredicted RBP13.75□□□□□ -0.21
HERC3-203ENST00000407637 ZNF184Q99676 751 aaPredicted RBP13.75□□□□□ -0.21
HERC3-203ENST00000407637 CENPKQ9BS16 269 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 ARMCX3Q9UH62 379 aaPredicted RBP13.75□□□□□ -0.21
HERC3-203ENST00000407637 NAGPAQ9UK23 515 aa13.75□□□□□ -0.21
HERC3-203ENST00000407637 A6NJR5 290 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 MINDY4BA8MYZ0 360 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 MAP3K7O43318 606 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 ACSL3O95573 720 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 ASLP04424 464 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 CCDC166P0CW27 439 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 SLC34A1Q06495 639 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 DDB1Q16531 1140 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 EXOC3L4Q17RC7 722 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 COBLL1Q53SF7 1204 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 ACSBG2Q5FVE4 666 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 HS2ST1Q7LGA3 356 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 PPFIBP2Q8ND30 876 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 SMC1BQ8NDV3 1235 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 MTA3Q9BTC8 594 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 MAGEF1Q9HAY2 307 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 USP40Q9NVE5 1235 aa13.74□□□□□ -0.21
HERC3-203ENST00000407637 FAM170AA1A519 330 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms