RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 SHC4Q6S5L8 630 aa32.58■■■□□ 2.81
CHCHD4-202ENST00000396914 FAM228AQ86W67 206 aa32.58■■■□□ 2.81
CHCHD4-202ENST00000396914 GDPD2Q9HCC8 539 aa32.58■■■□□ 2.81
CHCHD4-202ENST00000396914 FAM13BQ9NYF5 915 aa32.58■■■□□ 2.81
CHCHD4-202ENST00000396914 CHMP5Q9NZZ3 219 aa32.58■■■□□ 2.81
CHCHD4-202ENST00000396914 GLRA2P23416 452 aa32.57■■■□□ 2.8
CHCHD4-202ENST00000396914 SLC12A3P55017 1021 aa32.57■■■□□ 2.8
CHCHD4-202ENST00000396914 WDR5P61964 334 aaKnown RBP32.57■■■□□ 2.8
CHCHD4-202ENST00000396914 HABP4Q5JVS0 413 aaKnown RBP32.57■■■□□ 2.8
CHCHD4-202ENST00000396914 LARP4BQ92615 738 aaKnown RBP32.57■■■□□ 2.8
CHCHD4-202ENST00000396914 KIFAP3Q92845 792 aa32.57■■■□□ 2.8
CHCHD4-202ENST00000396914 ERVK-5Q9HDB9 667 aa32.57■■■□□ 2.8
CHCHD4-202ENST00000396914 BLOC1S4Q9NUP1 217 aa32.57■■■□□ 2.8
CHCHD4-202ENST00000396914 LRRIQ4A6NIV6 560 aa32.56■■■□□ 2.8
CHCHD4-202ENST00000396914 KRT18P05783 430 aaKnown RBP32.56■■■□□ 2.8
CHCHD4-202ENST00000396914 SFPQP23246 707 aaKnown RBP eCLIP32.56■■■□□ 2.8
CHCHD4-202ENST00000396914 CAPSQ13938 189 aa32.56■■■□□ 2.8
CHCHD4-202ENST00000396914 RASIP1Q5U651 963 aa32.56■■■□□ 2.8
CHCHD4-202ENST00000396914 C1orf186Q6ZWK4 172 aa32.56■■■□□ 2.8
CHCHD4-202ENST00000396914 GPBP1Q86WP2 473 aa32.56■■■□□ 2.8
CHCHD4-202ENST00000396914 LRRC15Q8TF66 581 aa32.56■■■□□ 2.8
CHCHD4-202ENST00000396914 IFT74Q96LB3 600 aa32.56■■■□□ 2.8
CHCHD4-202ENST00000396914 FTHL17Q9BXU8 183 aa32.56■■■□□ 2.8
CHCHD4-202ENST00000396914 STK17AQ9UEE5 414 aa32.56■■■□□ 2.8
CHCHD4-202ENST00000396914 HIP1RO75146 1068 aa32.55■■■□□ 2.8
CHCHD4-202ENST00000396914 AMHP03971 560 aa32.55■■■□□ 2.8
CHCHD4-202ENST00000396914 ATP2A2P16615 1042 aaKnown RBP32.55■■■□□ 2.8
CHCHD4-202ENST00000396914 IBSPP21815 317 aaPredicted RBP32.55■■■□□ 2.8
CHCHD4-202ENST00000396914 LIN28BQ6ZN17 250 aaKnown RBP eCLIP32.55■■■□□ 2.8
CHCHD4-202ENST00000396914 IPO9Q96P70 1041 aaKnown RBP32.55■■■□□ 2.8
CHCHD4-202ENST00000396914 IFT122Q9HBG6 1241 aa32.55■■■□□ 2.8
CHCHD4-202ENST00000396914 DENND3A2RUS2 1198 aa32.54■■■□□ 2.8
CHCHD4-202ENST00000396914 CATSPER4Q7RTX7 472 aa32.54■■■□□ 2.8
CHCHD4-202ENST00000396914 MYOCDQ8IZQ8 938 aa32.54■■■□□ 2.8
CHCHD4-202ENST00000396914 DRC1Q96MC2 740 aa32.54■■■□□ 2.8
CHCHD4-202ENST00000396914 TCHHQ07283 1943 aa32.54■■■□□ 2.8
CHCHD4-202ENST00000396914 HSFX4A0A1B0GTS1 333 aaPredicted RBP32.53■■■□□ 2.8
CHCHD4-202ENST00000396914 HSFX3A0A1B0GWH4 333 aaPredicted RBP32.53■■■□□ 2.8
CHCHD4-202ENST00000396914 DEFB103AP81534 67 aa32.53■■■□□ 2.8
CHCHD4-202ENST00000396914 PPP2R5AQ15172 486 aa32.53■■■□□ 2.8
CHCHD4-202ENST00000396914 SRGAP1Q7Z6B7 1085 aa32.53■■■□□ 2.8
CHCHD4-202ENST00000396914 SLC9A7Q96T83 725 aa32.53■■■□□ 2.8
CHCHD4-202ENST00000396914 TIPINQ9BVW5 301 aa32.53■■■□□ 2.8
CHCHD4-202ENST00000396914 KCND2Q9NZV8 630 aa32.53■■■□□ 2.8
CHCHD4-202ENST00000396914 A0A087X0B3 334 aa32.52■■■□□ 2.8
CHCHD4-202ENST00000396914 NPHP3-ACAD11A0A0J9YXS1 232 aa32.52■■■□□ 2.8
CHCHD4-202ENST00000396914 GRXCR1A8MXD5 290 aa32.52■■■□□ 2.8
CHCHD4-202ENST00000396914 LRIT3Q3SXY7 679 aa32.52■■■□□ 2.8
CHCHD4-202ENST00000396914 DHX58Q96C10 678 aa32.52■■■□□ 2.8
CHCHD4-202ENST00000396914 TMX1Q9H3N1 280 aa32.52■■■□□ 2.8
CHCHD4-202ENST00000396914 INO80B-WBP1J3KQ70 363 aa32.51■■■□□ 2.8
CHCHD4-202ENST00000396914 ZSCAN20P17040 1043 aaPredicted RBP32.51■■■□□ 2.8
CHCHD4-202ENST00000396914 GUCY2CP25092 1073 aa32.51■■■□□ 2.8
CHCHD4-202ENST00000396914 CACNB1Q02641 598 aaPredicted RBP32.51■■■□□ 2.8
CHCHD4-202ENST00000396914 RESP18Q5W5W9 173 aa32.51■■■□□ 2.8
CHCHD4-202ENST00000396914 FAM109BQ6ICB4 259 aaPredicted RBP32.51■■■□□ 2.8
CHCHD4-202ENST00000396914 FAM117BQ6P1L5 589 aa32.51■■■□□ 2.8
CHCHD4-202ENST00000396914 SV2BQ7L1I2 683 aa32.51■■■□□ 2.8
CHCHD4-202ENST00000396914 ZBTB8OSQ8IWT0 167 aa32.51■■■□□ 2.8
CHCHD4-202ENST00000396914 DEPTORQ8TB45 409 aa32.51■■■□□ 2.8
CHCHD4-202ENST00000396914 BSNDQ8WZ55 320 aa32.51■■■□□ 2.8
CHCHD4-202ENST00000396914 ZBED2Q9BTP6 218 aa32.51■■■□□ 2.8
CHCHD4-202ENST00000396914 TRIOBPQ9H2D6 2365 aa32.51■■■□□ 2.79
CHCHD4-202ENST00000396914 SFI1A8K8P3 1242 aa32.51■■■□□ 2.79
CHCHD4-202ENST00000396914 ENPP3O14638 875 aa32.51■■■□□ 2.79
CHCHD4-202ENST00000396914 UPP2O95045 317 aa32.51■■■□□ 2.79
CHCHD4-202ENST00000396914 PTENP60484 403 aa32.51■■■□□ 2.79
CHCHD4-202ENST00000396914 ADALQ6DHV7 355 aa32.51■■■□□ 2.79
CHCHD4-202ENST00000396914 TMCO2Q7Z6W1 182 aaPredicted RBP32.51■■■□□ 2.79
CHCHD4-202ENST00000396914 ADAM2Q99965 735 aa32.51■■■□□ 2.79
CHCHD4-202ENST00000396914 MINDY3Q9H8M7 445 aa32.51■■■□□ 2.79
CHCHD4-202ENST00000396914 MICAL3Q7RTP6 2002 aa32.51■■■□□ 2.79
CHCHD4-202ENST00000396914 LOC101059915A0A1B0GWI6 518 aaPredicted RBP32.5■■■□□ 2.79
CHCHD4-202ENST00000396914 CCDC169A6NNP5 214 aa32.5■■■□□ 2.79
CHCHD4-202ENST00000396914 ERLIN2O94905 339 aa32.5■■■□□ 2.79
CHCHD4-202ENST00000396914 ARSHQ5FYA8 562 aa32.5■■■□□ 2.79
CHCHD4-202ENST00000396914 PHOSPHO2Q8TCD6 241 aa32.5■■■□□ 2.79
CHCHD4-202ENST00000396914 ZHX3Q9H4I2 956 aa32.5■■■□□ 2.79
CHCHD4-202ENST00000396914 POLR2DO15514 142 aaKnown RBP32.49■■■□□ 2.79
CHCHD4-202ENST00000396914 LIG1P18858 919 aa32.49■■■□□ 2.79
CHCHD4-202ENST00000396914 NAMPTP43490 491 aa32.49■■■□□ 2.79
CHCHD4-202ENST00000396914 PEX3P56589 373 aa32.49■■■□□ 2.79
CHCHD4-202ENST00000396914 POU5F1BQ06416 359 aa32.49■■■□□ 2.79
CHCHD4-202ENST00000396914 DMP1Q13316 513 aaPredicted RBP32.49■■■□□ 2.79
CHCHD4-202ENST00000396914 NAALADL2Q58DX5 795 aa32.49■■■□□ 2.79
CHCHD4-202ENST00000396914 IQUBQ8NA54 791 aa32.49■■■□□ 2.79
CHCHD4-202ENST00000396914 PIN4Q9Y237 131 aaKnown RBP32.49■■■□□ 2.79
CHCHD4-202ENST00000396914 GOLGA6L4A6NEF3 574 aa32.48■■■□□ 2.79
CHCHD4-202ENST00000396914 MGEA5O60502 916 aa32.48■■■□□ 2.79
CHCHD4-202ENST00000396914 RABGGTBP53611 331 aa32.48■■■□□ 2.79
CHCHD4-202ENST00000396914 NCBP1Q09161 790 aaKnown RBP32.48■■■□□ 2.79
CHCHD4-202ENST00000396914 RTN4RL1Q86UN2 441 aaPredicted RBP32.48■■■□□ 2.79
CHCHD4-202ENST00000396914 HERC6Q8IVU3 1022 aa32.48■■■□□ 2.79
CHCHD4-202ENST00000396914 LINC01599Q8WXQ3 324 aa32.48■■■□□ 2.79
CHCHD4-202ENST00000396914 REEP2Q9BRK0 252 aa32.48■■■□□ 2.79
CHCHD4-202ENST00000396914 C2orf40Q9H1Z8 148 aa32.48■■■□□ 2.79
CHCHD4-202ENST00000396914 CMA1P23946 247 aa32.47■■■□□ 2.79
CHCHD4-202ENST00000396914 DYMQ7RTS9 669 aa32.47■■■□□ 2.79
CHCHD4-202ENST00000396914 DAW1Q8N136 415 aa32.47■■■□□ 2.79
CHCHD4-202ENST00000396914 KIFC3Q9BVG8 833 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms