RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 EPS8L3Q8TE67 593 aaKnown RBP14.27□□□□□ -0.12
NFKB1-202ENST00000394820 NT5C3AQ9H0P0 336 aa14.27□□□□□ -0.12
NFKB1-202ENST00000394820 ACP6Q9NPH0 428 aa14.27□□□□□ -0.12
NFKB1-202ENST00000394820 IRS2Q9Y4H2 1338 aa14.27□□□□□ -0.12
NFKB1-202ENST00000394820 PLCH1Q4KWH8 1693 aa14.27□□□□□ -0.12
NFKB1-202ENST00000394820 MYH8P13535 1937 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 SNED1Q8TER0 1413 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 TCP11X1B4DZS4 312 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 SLC20A2Q08357 652 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 LRRC34Q8IZ02 419 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 SYCE1Q8N0S2 351 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 CHMP6Q96FZ7 201 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.27□□□□□ -0.134e-6■■□□□ 11.8
NFKB1-202ENST00000394820 PI4KBQ9UBF8 816 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 STK17AQ9UEE5 414 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 ARHGEF35A5YM69 484 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 GOLGA8SH3BPF8 625 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 GOLGA8MH3BSY2 632 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 ECE1P42892 770 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 TMED2Q15363 201 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 PROM2Q8N271 834 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 SLC30A5Q8TAD4 765 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 FBXO25Q8TCJ0 367 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.27□□□□□ -0.13
NFKB1-202ENST00000394820 RABGAP1Q9Y3P9 1069 aa14.27□□□□□ -0.13
NFKB1-202ENST00000394820 ARHGAP4P98171 946 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 SETDB1Q15047 1291 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 NAB2Q15742 525 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 SLC35G2Q8TBE7 412 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 HAS1Q92839 578 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 PLCB1Q9NQ66 1216 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 ZBTB39O15060 712 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 PIAS1O75925 651 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 NR3C1P04150 777 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 PMS2P54278 862 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 RNF10Q8N5U6 811 aaKnown RBP14.26□□□□□ -0.13
NFKB1-202ENST00000394820 PRCCQ92733 491 aaPredicted RBP14.26□□□□□ -0.13
NFKB1-202ENST00000394820 DDX23Q9BUQ8 820 aaKnown RBP14.26□□□□□ -0.13
NFKB1-202ENST00000394820 KLHL11Q9NVR0 708 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 GAKO14976 1311 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 NDUFB10O96000 172 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 GNPTABQ3T906 1256 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 C18orf8Q96DM3 657 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 STAMBPL1Q96FJ0 436 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 MASTLQ96GX5 879 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 C9orf72Q96LT7 481 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 MTMR9Q96QG7 549 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 AMNQ9BXJ7 453 aa14.26□□□□□ -0.13
NFKB1-202ENST00000394820 EVI5O60447 810 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 MED24O75448 989 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 SHBGP04278 402 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 MEA1Q16626 185 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 LRCH2Q5VUJ6 765 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 CENPPQ6IPU0 288 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 CERKQ8TCT0 537 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 KLHL14Q9P2G3 628 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 TPX2Q9ULW0 747 aaKnown RBP14.25□□□□□ -0.13
NFKB1-202ENST00000394820 TIAM2Q8IVF5 1701 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 K7ENM7 598 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 CALCAP01258 141 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 MYL1P05976 194 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 MYCLP12524 364 aaPredicted RBP14.25□□□□□ -0.13
NFKB1-202ENST00000394820 KCNMA1Q12791 1236 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 ZNF653Q96CK0 615 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 PRMT6Q96LA8 375 aaPredicted RBP14.25□□□□□ -0.13
NFKB1-202ENST00000394820 SEMA4AQ9H3S1 761 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 NAGPAQ9UK23 515 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 FTLP02792 175 aaPredicted RBP14.25□□□□□ -0.13
NFKB1-202ENST00000394820 CASP5P51878 434 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 GLE1Q53GS7 698 aaKnown RBP14.25□□□□□ -0.13
NFKB1-202ENST00000394820 FAM182AQ5T1J6 154 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 PASD1Q8IV76 773 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 NSMCE1Q8WV22 266 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 FAM84AQ96KN4 292 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 HOMER3Q9NSC5 361 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 DCTN4Q9UJW0 460 aa14.25□□□□□ -0.13
NFKB1-202ENST00000394820 GAS7O60861 476 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 SCTRP47872 440 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 ZNF844Q08AG5 666 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 TAOK1Q7L7X3 1001 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 ACER1Q8TDN7 264 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 FAM163AQ96GL9 167 aaPredicted RBP14.24□□□□□ -0.13
NFKB1-202ENST00000394820 PBKQ96KB5 322 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 TCHPQ9BT92 498 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 NEUROG2Q9H2A3 272 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 DNAJC18Q9H819 358 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.24□□□□□ -0.13
NFKB1-202ENST00000394820 RASSF10A6NK89 507 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 GNA14O95837 355 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 BMP3P12645 472 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 DYNLT1P63172 113 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 ZKSCAN4Q969J2 545 aaPredicted RBP14.24□□□□□ -0.13
NFKB1-202ENST00000394820 XPO6Q96QU8 1125 aaKnown RBP14.24□□□□□ -0.13
NFKB1-202ENST00000394820 NAP1L3Q99457 506 aaPredicted RBP14.24□□□□□ -0.13
NFKB1-202ENST00000394820 CCDC77Q9BR77 488 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 MAGEF1Q9HAY2 307 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 FAM114A2Q9NRY5 505 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 SIK3Q9Y2K2 1263 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 NR2E1Q9Y466 385 aa14.24□□□□□ -0.13
NFKB1-202ENST00000394820 PVALEFA0A1B0GWK0 134 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms