RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 KRT27Q7Z3Y8 459 aa22.09■■□□□ 1.13
CLN5-201ENST00000377453 KAT5Q92993 513 aa22.09■■□□□ 1.13
CLN5-201ENST00000377453 POLR3CQ9BUI4 534 aaPredicted RBP22.09■■□□□ 1.13
CLN5-201ENST00000377453 PARVGQ9HBI0 331 aa22.09■■□□□ 1.13
CLN5-201ENST00000377453 BHMG1C9JSJ3 638 aaPredicted RBP22.09■■□□□ 1.13
CLN5-201ENST00000377453 TMEM179Q6ZVK1 233 aa22.09■■□□□ 1.13
CLN5-201ENST00000377453 FAM178BQ8IXR5 827 aa22.09■■□□□ 1.13
CLN5-201ENST00000377453 KRT35Q92764 455 aa22.09■■□□□ 1.13
CLN5-201ENST00000377453 LRRC45Q96CN5 670 aa22.09■■□□□ 1.13
CLN5-201ENST00000377453 CYFIP2Q96F07 1278 aa22.09■■□□□ 1.13
CLN5-201ENST00000377453 CALR3Q96L12 384 aaKnown RBP22.09■■□□□ 1.13
CLN5-201ENST00000377453 SLC12A6Q9UHW9 1150 aa22.09■■□□□ 1.13
CLN5-201ENST00000377453 SNX24Q9Y343 169 aa22.09■■□□□ 1.13
CLN5-201ENST00000377453 ATP2C2O75185 946 aa22.08■■□□□ 1.13
CLN5-201ENST00000377453 CIITAP33076 1130 aa22.08■■□□□ 1.13
CLN5-201ENST00000377453 GTF2A1P52655 376 aaPredicted RBP22.08■■□□□ 1.13
CLN5-201ENST00000377453 POU5F1Q01860 360 aaKnown RBP22.08■■□□□ 1.13
CLN5-201ENST00000377453 TATDN1Q6P1N9 297 aa22.08■■□□□ 1.13
CLN5-201ENST00000377453 B4GALNT4Q76KP1 1039 aa22.08■■□□□ 1.13
CLN5-201ENST00000377453 CTNNBL1Q8WYA6 563 aaPredicted RBP22.08■■□□□ 1.13
CLN5-201ENST00000377453 OLFML3Q9NRN5 406 aa22.08■■□□□ 1.13
CLN5-201ENST00000377453 UBR3Q6ZT12 1888 aa22.08■■□□□ 1.12
CLN5-201ENST00000377453 GUCY2CP25092 1073 aa22.08■■□□□ 1.12
CLN5-201ENST00000377453 ZNF720Q7Z2F6 126 aa22.08■■□□□ 1.12
CLN5-201ENST00000377453 ARHGEF19Q8IW93 802 aa22.08■■□□□ 1.12
CLN5-201ENST00000377453 RFFLQ8WZ73 363 aa22.08■■□□□ 1.12
CLN5-201ENST00000377453 STK33Q9BYT3 514 aa22.08■■□□□ 1.12
CLN5-201ENST00000377453 H0YHG0 523 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 TNFAIP3P21580 790 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 USP8P40818 1118 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 FNTAP49354 379 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 MYL7Q01449 175 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 PPATQ06203 517 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 LMBR1Q8WVP7 490 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 UNC45AQ9H3U1 944 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 TMEM150BA6NC51 233 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 PHF20L1A8MW92 1017 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 CCDC188H7C350 402 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 EXOC3O60645 756 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 PSMD10O75832 226 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 LRIG3Q6UXM1 1119 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 C18orf8Q96DM3 657 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 BTBD6Q96KE9 485 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 SYT11Q9BT88 431 aa22.07■■□□□ 1.12
CLN5-201ENST00000377453 UTP11Q9Y3A2 253 aaKnown RBP22.07■■□□□ 1.12
CLN5-201ENST00000377453 GAS7O60861 476 aa22.06■■□□□ 1.12
CLN5-201ENST00000377453 FOSP01100 380 aaPredicted RBP22.06■■□□□ 1.12
CLN5-201ENST00000377453 KRT13P13646 458 aa22.06■■□□□ 1.12
CLN5-201ENST00000377453 MMS22LQ6ZRQ5 1243 aa22.06■■□□□ 1.12
CLN5-201ENST00000377453 SYCP3Q8IZU3 236 aa22.06■■□□□ 1.12
CLN5-201ENST00000377453 CCDC26Q8TAB7 109 aa22.06■■□□□ 1.12
CLN5-201ENST00000377453 A0A0A6YYK5 440 aaPredicted RBP22.06■■□□□ 1.12
CLN5-201ENST00000377453 CAND2O75155 1236 aa22.06■■□□□ 1.12
CLN5-201ENST00000377453 FAM107AO95990 144 aa22.06■■□□□ 1.12
CLN5-201ENST00000377453 PLTPP55058 493 aa22.06■■□□□ 1.12
CLN5-201ENST00000377453 SYCE1Q8N0S2 351 aa22.06■■□□□ 1.12
CLN5-201ENST00000377453 RAPGEF5Q92565 580 aa22.06■■□□□ 1.12
CLN5-201ENST00000377453 PNMA2Q9UL42 364 aa22.06■■□□□ 1.12
CLN5-201ENST00000377453 TLDC2A0PJX2 215 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 TMEM253P0C7T8 217 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 MMP14P50281 582 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 ZDHHC14Q8IZN3 488 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 GMCL1Q96IK5 515 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 DDX20Q9UHI6 824 aaKnown RBP22.05■■□□□ 1.12
CLN5-201ENST00000377453 C10orf71Q711Q0 1435 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 TCRBV7S2A1N4TA0A589 114 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 LMNB1P20700 586 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 GCLMP48507 274 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 DR1Q01658 176 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 IFFO1Q0D2I5 559 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 SF3B2Q13435 895 aaKnown RBP22.05■■□□□ 1.12
CLN5-201ENST00000377453 DACT2Q5SW24 774 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 EMC10Q5UCC4 262 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 CDAN1Q8IWY9 1227 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 CSRNP1Q96S65 589 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 FMO2Q99518 471 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 SLITRK6Q9H5Y7 841 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 UBE2TQ9NPD8 197 aaPredicted RBP22.05■■□□□ 1.12
CLN5-201ENST00000377453 FBXO28Q9NVF7 368 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 APEX2Q9UBZ4 518 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 ZBTB21Q9ULJ3 1066 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 FRMD4BQ9Y2L6 1034 aa22.05■■□□□ 1.12
CLN5-201ENST00000377453 NCANO14594 1321 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 ECE2O60344 883 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 HIP1RO75146 1068 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 CALCAP01258 141 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 GAP43P17677 238 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 PPP2R2AP63151 447 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 RBM26Q5T8P6 1007 aaKnown RBP22.04■■□□□ 1.12
CLN5-201ENST00000377453 HS2ST1Q7LGA3 356 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 DAW1Q8N136 415 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 GMCL1P1Q8NEA9 526 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 FAM84AQ96KN4 292 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 PRMT6Q96LA8 375 aaPredicted RBP22.04■■□□□ 1.12
CLN5-201ENST00000377453 EPB41L4BQ9H329 900 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 EMSYQ7Z589 1322 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 CLRN2A0PK11 232 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 GTPBP10A4D1E9 387 aaKnown RBP22.04■■□□□ 1.12
CLN5-201ENST00000377453 TCP10L2B9ZVM9 353 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 PPP1R12BO60237 982 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms