RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 FAM49AQ9H0Q0 323 aaPredicted RBP12.08□□□□□ -0.48
BRCC3-204ENST00000369462 KMT5AQ9NQR1 393 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 PRDM10Q9NQV6 1147 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 GTF2IRD1Q9UHL9 959 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 OGDHLQ9ULD0 1010 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 AKT3Q9Y243 479 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 EVPLQ92817 2033 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 MYH11P35749 1972 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 MKI67P46013 3256 aaKnown RBP12.07□□□□□ -0.48
BRCC3-204ENST00000369462 A0A1W2PQ45 241 aaPredicted RBP12.07□□□□□ -0.48
BRCC3-204ENST00000369462 A0A1W2PQY0 241 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 LRRIQ4A6NIV6 560 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 PSMA7O14818 248 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 PRPF6O94906 941 aaKnown RBP12.07□□□□□ -0.48
BRCC3-204ENST00000369462 CAVIN2O95810 425 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 SRGAP2CP0DJJ0 459 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 STX17P56962 302 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 LAMTOR4Q0VGL1 99 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 ITGA7Q13683 1181 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 MXD4Q14582 209 aaPredicted RBP12.07□□□□□ -0.48
BRCC3-204ENST00000369462 HAUS6Q7Z4H7 955 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 NELFCDQ8IXH7 590 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 GUF1Q8N442 669 aaKnown RBP12.07□□□□□ -0.48
BRCC3-204ENST00000369462 FAM200AQ8TCP9 573 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 ZNF668Q96K58 619 aaPredicted RBP12.07□□□□□ -0.48
BRCC3-204ENST00000369462 NTPCRQ9BSD7 190 aaKnown RBP12.07□□□□□ -0.48
BRCC3-204ENST00000369462 RBSNQ9H1K0 784 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 CBX8Q9HC52 389 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 DNM1LO00429 736 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 SGPL1O95470 568 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 TFRCP02786 760 aaKnown RBP12.07□□□□□ -0.48
BRCC3-204ENST00000369462 CYP2C9P11712 490 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 HOXC8P31273 242 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 KCNA1Q09470 495 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 PPP2R5AQ15172 486 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 LUZP1Q86V48 1076 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 KIAA0319LQ8IZA0 1049 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 LINC01465Q8N7H1 131 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 SPIRE2Q8WWL2 714 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 STARD7Q9NQZ5 370 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 CTNND2Q9UQB3 1225 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 PCDHB13Q9Y5F0 798 aa12.07□□□□□ -0.48
BRCC3-204ENST00000369462 ADGRA3Q8IWK6 1321 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 VTNP04004 478 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 PAK1Q13153 545 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 CAPSQ13938 189 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 GSE1Q14687 1217 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 COBLL1Q53SF7 1204 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 GDF6Q6KF10 455 aaPredicted RBP12.06□□□□□ -0.48
BRCC3-204ENST00000369462 EPM2AIP1Q7L775 607 aaPredicted RBP12.06□□□□□ -0.48
BRCC3-204ENST00000369462 AOPEPQ8N6M6 819 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 RNF149Q8NC42 400 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 TMEM161BQ8NDZ6 487 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 NELFBQ8WX92 580 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 NLRP4Q96MN2 994 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 MED15Q96RN5 788 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 MAP7D2Q96T17 732 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 PPP1R16BQ96T49 567 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 PHF24Q9UPV7 400 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 KIF20AO95235 890 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 MAPTP10636 758 aaKnown RBP12.06□□□□□ -0.48
BRCC3-204ENST00000369462 ERCC5P28715 1186 aaPredicted RBP12.06□□□□□ -0.48
BRCC3-204ENST00000369462 NAMPTP43490 491 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 NCKAP1LP55160 1127 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 RUFY4Q6ZNE9 571 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 STXBP4Q6ZWJ1 553 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 DEPTORQ8TB45 409 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 DHTKD1Q96HY7 919 aaPredicted RBP12.06□□□□□ -0.48
BRCC3-204ENST00000369462 KCNG1Q9UIX4 513 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 TRIP12Q14669 1992 aaPredicted RBP12.06□□□□□ -0.48
BRCC3-204ENST00000369462 DENND3A2RUS2 1198 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 BECN2A8MW95 431 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 ASAP2O43150 1006 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 PPP1R2P41236 205 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 PMS1P54277 932 aaKnown RBP12.06□□□□□ -0.48
BRCC3-204ENST00000369462 IQCB1Q15051 598 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 CT47A1Q5JQC4 288 aaPredicted RBP12.06□□□□□ -0.48
BRCC3-204ENST00000369462 SLC17A8Q8NDX2 589 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 ZNF507Q8TCN5 953 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 DNAJB3Q8WWF6 145 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 STRA6Q9BX79 667 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 MCOLN1Q9GZU1 580 aa12.06□□□□□ -0.48
BRCC3-204ENST00000369462 FRMPD3Q5JV73 1810 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 SMIM35A0A1B0GVV1 85 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 TRIM49BA6NDI0 452 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 EIF3DO15371 548 aaKnown RBP eCLIP12.05□□□□□ -0.48
BRCC3-204ENST00000369462 PPP1R37O75864 691 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 HOXD13P35453 343 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 GTF2BQ00403 316 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 TMEM62Q0P6H9 643 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 SESTD1Q86VW0 696 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 P2RX5Q93086 422 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 BPIFA3Q9BQP9 254 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 CRISPLD2Q9H0B8 497 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 SEMA6BQ9H3T3 888 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 ST6GALNAC4Q9H4F1 302 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 ARHGAP28Q9P2N2 729 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 CCNE1P24864 410 aa12.05□□□□□ -0.48
BRCC3-204ENST00000369462 NLRP11P59045 1033 aaKnown RBP12.05□□□□□ -0.48
BRCC3-204ENST00000369462 KNOP1Q1ED39 458 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms