RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 RIOX1Q9H6W3 641 aa19.23■□□□□ 0.67
APP-202ENST00000348990 SRP68Q9UHB9 627 aaKnown RBP19.23■□□□□ 0.67
APP-202ENST00000348990 PNMA6FA0A0J9YX94 578 aa19.23■□□□□ 0.67
APP-202ENST00000348990 KIAA0391O15091 583 aaKnown RBP19.23■□□□□ 0.67
APP-202ENST00000348990 EDIL3O43854 480 aa19.23■□□□□ 0.67
APP-202ENST00000348990 SOX5P35711 763 aa19.23■□□□□ 0.67
APP-202ENST00000348990 ZNF76P36508 570 aa19.23■□□□□ 0.67
APP-202ENST00000348990 PPP2R5EQ16537 467 aa19.23■□□□□ 0.67
APP-202ENST00000348990 PIGWQ7Z7B1 504 aa19.23■□□□□ 0.67
APP-202ENST00000348990 YIPF3Q9GZM5 350 aa19.23■□□□□ 0.67
APP-202ENST00000348990 JMJD4Q9H9V9 463 aa19.23■□□□□ 0.67
APP-202ENST00000348990 ASIC3Q9UHC3 531 aa19.23■□□□□ 0.67
APP-202ENST00000348990 TMEM120BA0PK00 339 aa19.22■□□□□ 0.67
APP-202ENST00000348990 FAM187AA6NFU0 413 aa19.22■□□□□ 0.67
APP-202ENST00000348990 UPP2O95045 317 aa19.22■□□□□ 0.67
APP-202ENST00000348990 GSTA1P08263 222 aa19.22■□□□□ 0.67
APP-202ENST00000348990 CREB1P16220 341 aa19.22■□□□□ 0.67
APP-202ENST00000348990 STX2P32856 288 aa19.22■□□□□ 0.67
APP-202ENST00000348990 MARCKSL1P49006 195 aa19.22■□□□□ 0.67
APP-202ENST00000348990 MARSP56192 900 aaKnown RBP19.22■□□□□ 0.67
APP-202ENST00000348990 FAM47EQ6ZV65 393 aa19.22■□□□□ 0.67
APP-202ENST00000348990 KRT35Q92764 455 aa19.22■□□□□ 0.67
APP-202ENST00000348990 SLC35C1Q96A29 364 aa19.22■□□□□ 0.67
APP-202ENST00000348990 KIF9Q9HAQ2 790 aa19.22■□□□□ 0.67
APP-202ENST00000348990 PCDHA2Q9Y5H9 948 aa19.22■□□□□ 0.67
APP-202ENST00000348990 FAM13AO94988 1023 aa19.22■□□□□ 0.67
APP-202ENST00000348990 KLRC3Q07444 240 aa19.22■□□□□ 0.67
APP-202ENST00000348990 CAPRIN2Q6IMN6 1127 aaKnown RBP19.22■□□□□ 0.67
APP-202ENST00000348990 TLDC1Q6P9B6 456 aa19.22■□□□□ 0.67
APP-202ENST00000348990 C16orf86Q6ZW13 317 aa19.22■□□□□ 0.67
APP-202ENST00000348990 SLFN11Q7Z7L1 901 aa19.22■□□□□ 0.67
APP-202ENST00000348990 CATSPER3Q86XQ3 398 aa19.22■□□□□ 0.67
APP-202ENST00000348990 CARD9Q9H257 536 aa19.22■□□□□ 0.67
APP-202ENST00000348990 SLC12A4Q9UP95 1085 aa19.22■□□□□ 0.67
APP-202ENST00000348990 CHMP2AO43633 222 aa19.21■□□□□ 0.67
APP-202ENST00000348990 SNX3O60493 162 aa19.21■□□□□ 0.67
APP-202ENST00000348990 PRKCIP41743 596 aa19.21■□□□□ 0.67
APP-202ENST00000348990 CCNHP51946 323 aaPredicted RBP19.21■□□□□ 0.67
APP-202ENST00000348990 SNAP25P60880 206 aa19.21■□□□□ 0.67
APP-202ENST00000348990 SATB1Q01826 763 aa19.21■□□□□ 0.67
APP-202ENST00000348990 ASPRV1Q53RT3 343 aa19.21■□□□□ 0.67
APP-202ENST00000348990 ERICH1Q86X53 443 aa19.21■□□□□ 0.67
APP-202ENST00000348990 PIGOQ8TEQ8 1089 aa19.21■□□□□ 0.67
APP-202ENST00000348990 ZDHHC18Q9NUE0 388 aa19.21■□□□□ 0.67
APP-202ENST00000348990 GSTTP1A0A1W2PQM5 241 aa19.21■□□□□ 0.67
APP-202ENST00000348990 AKR1B1P15121 316 aa19.21■□□□□ 0.67
APP-202ENST00000348990 NCALDP61601 193 aa19.21■□□□□ 0.67
APP-202ENST00000348990 DHX34Q14147 1143 aaKnown RBP19.21■□□□□ 0.67
APP-202ENST00000348990 GIT2Q14161 759 aa19.21■□□□□ 0.67
APP-202ENST00000348990 SAMD1Q6SPF0 538 aaPredicted RBP19.21■□□□□ 0.67
APP-202ENST00000348990 TRMT1LQ7Z2T5 733 aaKnown RBP19.21■□□□□ 0.67
APP-202ENST00000348990 PALB2Q86YC2 1186 aa19.21■□□□□ 0.67
APP-202ENST00000348990 CCHCR1Q8TD31 782 aa19.21■□□□□ 0.67
APP-202ENST00000348990 ADAM7Q9H2U9 754 aa19.21■□□□□ 0.67
APP-202ENST00000348990 TAF1P21675 1872 aa19.21■□□□□ 0.67
APP-202ENST00000348990 KRT16P08779 473 aa19.21■□□□□ 0.67
APP-202ENST00000348990 NUDT17P0C025 328 aa19.21■□□□□ 0.67
APP-202ENST00000348990 ZC2HC1CQ53FD0 456 aaPredicted RBP19.21■□□□□ 0.67
APP-202ENST00000348990 BZW1Q7L1Q6 419 aaKnown RBP19.21■□□□□ 0.67
APP-202ENST00000348990 VSIG1Q86XK7 387 aa19.21■□□□□ 0.67
APP-202ENST00000348990 DDX23Q9BUQ8 820 aaKnown RBP19.21■□□□□ 0.67
APP-202ENST00000348990 MTUS1Q9ULD2 1270 aa19.21■□□□□ 0.67
APP-202ENST00000348990 PCDHA1Q9Y5I3 950 aa19.21■□□□□ 0.67
APP-202ENST00000348990 DDX3YO15523 660 aaKnown RBP19.2■□□□□ 0.66
APP-202ENST00000348990 NMT1P30419 496 aaKnown RBP19.2■□□□□ 0.66
APP-202ENST00000348990 TNIP1Q15025 636 aa19.2■□□□□ 0.66
APP-202ENST00000348990 TAF11Q15544 211 aa19.2■□□□□ 0.66
APP-202ENST00000348990 CNGA2Q16280 664 aa19.2■□□□□ 0.66
APP-202ENST00000348990 ZNF804AQ7Z570 1209 aa19.2■□□□□ 0.66
APP-202ENST00000348990 KLHL14Q9P2G3 628 aa19.2■□□□□ 0.66
APP-202ENST00000348990 A0A0A6YYK5 440 aaPredicted RBP19.2■□□□□ 0.66
APP-202ENST00000348990 ATMINO43313 823 aaPredicted RBP19.2■□□□□ 0.66
APP-202ENST00000348990 TMEM253P0C7T8 217 aa19.2■□□□□ 0.66
APP-202ENST00000348990 COPS2P61201 443 aa19.2■□□□□ 0.66
APP-202ENST00000348990 SLC30A10Q6XR72 485 aa19.2■□□□□ 0.66
APP-202ENST00000348990 SEPT14Q6ZU15 432 aa19.2■□□□□ 0.66
APP-202ENST00000348990 COL23A1Q86Y22 540 aaPredicted RBP19.2■□□□□ 0.66
APP-202ENST00000348990 SYCP3Q8IZU3 236 aa19.2■□□□□ 0.66
APP-202ENST00000348990 SLC17A8Q8NDX2 589 aa19.2■□□□□ 0.66
APP-202ENST00000348990 EPB41L4BQ9H329 900 aa19.2■□□□□ 0.66
APP-202ENST00000348990 ETNK1Q9HBU6 452 aa19.2■□□□□ 0.66
APP-202ENST00000348990 TYW1Q9NV66 732 aaKnown RBP19.2■□□□□ 0.66
APP-202ENST00000348990 USP40Q9NVE5 1235 aa19.2■□□□□ 0.66
APP-202ENST00000348990 MTMR4Q9NYA4 1195 aa19.2■□□□□ 0.66
APP-202ENST00000348990 PARP2Q9UGN5 583 aa19.2■□□□□ 0.66
APP-202ENST00000348990 PDXKO00764 312 aa19.19■□□□□ 0.66
APP-202ENST00000348990 PPP1R12AO14974 1030 aaPredicted RBP19.19■□□□□ 0.66
APP-202ENST00000348990 FTLP02792 175 aaPredicted RBP19.19■□□□□ 0.66
APP-202ENST00000348990 POU5F1Q01860 360 aaKnown RBP19.19■□□□□ 0.66
APP-202ENST00000348990 AUHQ13825 339 aaKnown RBP19.19■□□□□ 0.66
APP-202ENST00000348990 USH1GQ495M9 461 aa19.19■□□□□ 0.66
APP-202ENST00000348990 ZDHHC24Q6UX98 284 aa19.19■□□□□ 0.66
APP-202ENST00000348990 TPTE2Q6XPS3 522 aa19.19■□□□□ 0.66
APP-202ENST00000348990 POP1Q99575 1024 aaKnown RBP19.19■□□□□ 0.66
APP-202ENST00000348990 CTNNAL1Q9UBT7 734 aa19.19■□□□□ 0.66
APP-202ENST00000348990 CCDC189A1A4V9 331 aa19.19■□□□□ 0.66
APP-202ENST00000348990 PHF2O75151 1096 aa19.19■□□□□ 0.66
APP-202ENST00000348990 HOXA7P31268 230 aaPredicted RBP19.19■□□□□ 0.66
APP-202ENST00000348990 SLC8A3P57103 927 aa19.19■□□□□ 0.66
APP-202ENST00000348990 SARNPP82979 210 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms