RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 BAG6P46379 1132 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 GLE1Q53GS7 698 aaKnown RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 RCSD1Q6JBY9 416 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 ADSSL1Q8N142 457 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 NEDD1Q8NHV4 660 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 ZNF668Q96K58 619 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 FAM213AQ9BRX8 229 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 INTS2Q9H0H0 1204 aaKnown RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 ZNF233A6NK53 670 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 NMT1P30419 496 aaKnown RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 FAM47EQ6ZV65 393 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 FAM160B2Q86V87 743 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 THNSL1Q8IYQ7 743 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 SPATA4Q8NEY3 305 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 DCPSQ96C86 337 aaKnown RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 RNPC3Q96LT9 517 aaKnown RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 CFAP57Q96MR6 1250 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 NUF2Q9BZD4 464 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 TMEM60Q9H2L4 133 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 ECT2Q9H8V3 914 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 SAYSD1Q9NPB0 183 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 GINM1Q9NU53 330 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 TTC7AQ9ULT0 858 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 PTPRUQ92729 1446 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 INO80Q9ULG1 1556 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 ECE2O60344 883 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 CPP00450 1065 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 MT-ND3P03897 115 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 CA4P22748 312 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 SERPINB6P35237 376 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 RASGRP2Q7LDG7 609 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 XXYLT1Q8NBI6 393 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 CYFIP2Q96F07 1278 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 MASTLQ96GX5 879 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 NOD2Q9HC29 1040 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 INTUQ9ULD6 942 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 NOC2LQ9Y3T9 749 aaKnown RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 TACC3Q9Y6A5 838 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 PIK3C2BO00750 1634 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 CFAP73A6NFT4 308 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 SNUPNO95149 360 aaKnown RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 FTLP02792 175 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 GYPCP04921 128 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 GPC5P78333 572 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 NFIXQ14938 502 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 ZNF34Q8IZ26 560 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 GABPB2Q8TAK5 448 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 ZKSCAN4Q969J2 545 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 SGSM3Q96HU1 749 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 FGD4Q96M96 766 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 HEXIM2Q96MH2 286 aaKnown RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 RMDN3Q96TC7 470 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 EIF2AK1Q9BQI3 630 aaKnown RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 C11orf70Q9BRQ4 267 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 MXD3Q9BW11 206 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 CEMIPQ8WUJ3 1361 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 MAP2K7O14733 419 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 KRT14P02533 472 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 CNGA1P29973 690 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 ECE1P42892 770 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 EIF3BP55884 814 aaKnown RBP8.63□□□□□ -1.03
UBE4B-202ENST00000343090 KCNB1Q14721 858 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 PLCB4Q15147 1175 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 PTGISQ16647 500 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 C6orf118Q5T5N4 469 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 RNF25Q96BH1 459 aaPredicted RBP8.63□□□□□ -1.03
UBE4B-202ENST00000343090 NUP85Q9BW27 656 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 TXLNGQ9NUQ3 528 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 ADAM22Q9P0K1 906 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 hCG_2014768A0A024R1R8 64 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 RPS6KA2Q15349 733 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 RAPH1Q70E73 1250 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 NLRP7Q8WX94 980 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 SEC16BQ96JE7 1060 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 AMACRQ9UHK6 382 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 MYMKA6NI61 221 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 STXBP3O00186 592 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 ADCY2Q08462 1091 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 TMEM270Q6UE05 265 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 ZC3H18Q86VM9 953 aaKnown RBP8.63□□□□□ -1.03
UBE4B-202ENST00000343090 CDKL2Q92772 493 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 LXNQ9BS40 222 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 MIS12Q9H081 205 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 FAF1Q9UNN5 650 aaPredicted RBP8.63□□□□□ -1.03
UBE4B-202ENST00000343090 DENND3A2RUS2 1198 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 TOM1L1O75674 476 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 VAMP7P51809 220 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 MKRN3Q13064 507 aaKnown RBP8.63□□□□□ -1.03
UBE4B-202ENST00000343090 MKRN4PQ13434 485 aaPredicted RBP8.63□□□□□ -1.03
UBE4B-202ENST00000343090 LRRC14Q15048 493 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.63□□□□□ -1.03
UBE4B-202ENST00000343090 TMCO4Q5TGY1 634 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 ERICH1Q86X53 443 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 CHMP6Q96FZ7 201 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 FAM20AQ96MK3 541 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.63□□□□□ -1.032e-6■■■□□ 17.7
UBE4B-202ENST00000343090 PNMA2Q9UL42 364 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 PPP1R9AQ9ULJ8 1098 aa8.63□□□□□ -1.03
UBE4B-202ENST00000343090 RPS6KA5O75582 802 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms