RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 PSME4Q14997 1843 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 TTC26A0AVF1 554 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 TMEM150BA6NC51 233 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 PPP1R3GB7ZBB8 358 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 KRT18P05783 430 aaKnown RBP11.23□□□□□ -0.61
ABCF1-201ENST00000326195 CYP27A1Q02318 531 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 BYSLQ13895 437 aaKnown RBP11.23□□□□□ -0.61
ABCF1-201ENST00000326195 ANKRD20A8PQ5CZ79 823 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 ZNF658Q5TYW1 1059 aaPredicted RBP11.23□□□□□ -0.61
ABCF1-201ENST00000326195 MICALCLQ6ZW33 695 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 GPR142Q7Z601 462 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 SPATS2Q86XZ4 545 aaKnown RBP11.23□□□□□ -0.61
ABCF1-201ENST00000326195 CCDC26Q8TAB7 109 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 NSMCE1Q8WV22 266 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 CCDC43Q96MW1 224 aaKnown RBP11.23□□□□□ -0.61
ABCF1-201ENST00000326195 PPP1R16BQ96T49 567 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 NUP58Q9BVL2 599 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 SLC39A2Q9NP94 309 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 ETAA1Q9NY74 926 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 GABRQQ9UN88 632 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 EIF4E1BA6NMX2 242 aaKnown RBP11.23□□□□□ -0.61
ABCF1-201ENST00000326195 HSF2BPO75031 334 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 ATP9AO75110 1047 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 FAM107AO95990 144 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 MDH1P40925 334 aaKnown RBP11.23□□□□□ -0.61
ABCF1-201ENST00000326195 PLCB4Q15147 1175 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 LY6KQ17RY6 165 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 CABP7Q86V35 215 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 MCF2L2Q86YR7 1114 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 IQCKQ8N0W5 287 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 SPDYE1Q8NFV5 336 aaPredicted RBP11.23□□□□□ -0.61
ABCF1-201ENST00000326195 OR8K1Q8NGG5 319 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 VTI1AQ96AJ9 217 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 RGL1Q9NZL6 768 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 ZBTB39O15060 712 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 CNMDO75829 334 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 NR1D1P20393 614 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 HOXA7P31268 230 aaPredicted RBP11.23□□□□□ -0.61
ABCF1-201ENST00000326195 HPDP32754 393 aaPredicted RBP11.23□□□□□ -0.61
ABCF1-201ENST00000326195 SCTRP47872 440 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 MYO1EQ12965 1108 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 TRIM32Q13049 653 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 CCDC121Q6ZUS5 278 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 CACNA2D4Q7Z3S7 1137 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 TPH2Q8IWU9 490 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 C12orf42Q96LP6 360 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 RUFY1Q96T51 708 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 ZNF577Q9BSK1 485 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 RNF186Q9NXI6 227 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 RWDD2AQ9UIY3 292 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 TRIM17Q9Y577 477 aa11.23□□□□□ -0.61
ABCF1-201ENST00000326195 KRT86O43790 486 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 CAND2O75155 1236 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 CALRP27797 417 aaKnown RBP11.22□□□□□ -0.61
ABCF1-201ENST00000326195 CARSP49589 748 aaKnown RBP11.22□□□□□ -0.61
ABCF1-201ENST00000326195 FLT3LGP49771 235 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 KRT83P78385 493 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 CAP1Q01518 475 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 CYFIP1Q7L576 1253 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 NOC4LQ9BVI4 516 aaKnown RBP11.22□□□□□ -0.61
ABCF1-201ENST00000326195 HAUS4Q9H6D7 363 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 MMRN2Q9H8L6 949 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 PCDHA12Q9UN75 941 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 MYH10P35580 1976 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 BICDL2A1A5D9 508 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 TRIM49BA6NDI0 452 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 TLR2O60603 784 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 MYBL1P10243 752 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 TMOD1P28289 359 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 CTTNQ14247 550 aaKnown RBP11.22□□□□□ -0.61
ABCF1-201ENST00000326195 AP1ARQ63HQ0 302 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 HAUS3Q68CZ6 603 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 BZW1Q7L1Q6 419 aaKnown RBP11.22□□□□□ -0.61
ABCF1-201ENST00000326195 MAB21L3Q8N8X9 362 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 SPATA4Q8NEY3 305 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 GINM1Q9NU53 330 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 GINS2Q9Y248 185 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 SCN4AP35499 1836 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 ZNF646O15015 1829 aaPredicted RBP11.22□□□□□ -0.61
ABCF1-201ENST00000326195 GOLGA6L7A0A1B0GV03 622 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 AKR1B10O60218 316 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 USO1O60763 962 aaKnown RBP11.22□□□□□ -0.61
ABCF1-201ENST00000326195 GAS7O60861 476 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 PRCPP42785 496 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 CKAP4Q07065 602 aaKnown RBP11.22□□□□□ -0.61
ABCF1-201ENST00000326195 TCP11X2Q5H9J9 407 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 CCDC181Q5TID7 509 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 ALS2CLQ60I27 953 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 ARL6IP4Q66PJ3 421 aaKnown RBP11.22□□□□□ -0.61
ABCF1-201ENST00000326195 GPIHBP1Q8IV16 184 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 NSUN6Q8TEA1 469 aaKnown RBP11.22□□□□□ -0.61
ABCF1-201ENST00000326195 PIGOQ8TEQ8 1089 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 CCDC42Q96M95 316 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 DISC1Q9NRI5 854 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 SPATS2LQ9NUQ6 558 aaKnown RBP11.22□□□□□ -0.61
ABCF1-201ENST00000326195 BAIAP2L1Q9UHR4 511 aa11.22□□□□□ -0.61
ABCF1-201ENST00000326195 COL2A1P02458 1487 aaPredicted RBP11.21□□□□□ -0.61
ABCF1-201ENST00000326195 ITIH6Q6UXX5 1313 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 MGRN1O60291 552 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 GLI1P08151 1106 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms