RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 FLOT1O75955 427 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 PLEKHA8P1O95397 391 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 LDHCP07864 332 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 PYGMP11217 842 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 HMGB2P26583 209 aaKnown RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 CRKP46108 304 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 RAD23BP54727 409 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 KRT83P78385 493 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 GSTO1P78417 241 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 MCL1Q07820 350 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 LRP8Q14114 963 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 ZNF268Q14587 947 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 C12orf60Q5U649 245 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 CDC42EP5Q6NZY7 148 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 WDR60Q8WVS4 1066 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 MAELQ96JY0 434 aaKnown RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 SPATA17Q96L03 361 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 CARD9Q9H257 536 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 CNNM2Q9H8M5 875 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 ADAM22Q9P0K1 906 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 NKX1-2Q9UD57 310 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 KCNA2P16389 499 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 SLC44A4Q53GD3 710 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 DACT2Q5SW24 774 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 LMBRD2Q68DH5 695 aaPredicted RBP11.11□□□□□ -0.63
SF3B2-201ENST00000322535 APOBEC3HQ6NTF7 200 aaKnown RBP11.11□□□□□ -0.63
SF3B2-201ENST00000322535 CAPN12Q6ZSI9 719 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 TRPM8Q7Z2W7 1104 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 TMC4Q7Z404 712 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 ZNF654Q8IZM8 581 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 UCMAQ8WVF2 138 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 CASKIN2Q8WXE0 1202 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 ZNF653Q96CK0 615 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 SNX27Q96L92 541 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 ALG1Q9BT22 464 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 IL17RBQ9NRM6 502 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 SAMD15Q9P1V8 674 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 HESX1Q9UBX0 185 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 KCNJ14Q9UNX9 436 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 ENDOUP21128 410 aaKnown RBP11.11□□□□□ -0.63
SF3B2-201ENST00000322535 BDNFP23560 247 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 ARPC4P59998 168 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 KRT71Q3SY84 523 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 PODNQ7Z5L7 613 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 DAAM2Q86T65 1068 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 ZNF554Q86TJ5 538 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 DDX42Q86XP3 938 aaKnown RBP eCLIP11.11□□□□□ -0.63
SF3B2-201ENST00000322535 CCNJLQ8IV13 435 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 APLFQ8IW19 511 aaPredicted RBP11.11□□□□□ -0.63
SF3B2-201ENST00000322535 CDAN1Q8IWY9 1227 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 KRI1Q8N9T8 703 aaKnown RBP11.11□□□□□ -0.63
SF3B2-201ENST00000322535 PRMT6Q96LA8 375 aaPredicted RBP11.11□□□□□ -0.63
SF3B2-201ENST00000322535 RNF41Q9H4P4 317 aaPredicted RBP11.11□□□□□ -0.63
SF3B2-201ENST00000322535 PIM2Q9P1W9 311 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 SLC12A4Q9UP95 1085 aa11.11□□□□□ -0.63
SF3B2-201ENST00000322535 CCDC88AQ3V6T2 1871 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 NRXN2Q9P2S2 1712 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 A0A0J9YVX5 310 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 ABLIM1O14639 778 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 SPTLC1O15269 473 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 MAGEB3O15480 346 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 TSPY3P0CV98 308 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 TSPY8P0CW00 308 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 NEK2P51955 445 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 COPB1P53618 953 aaKnown RBP11.1□□□□□ -0.63
SF3B2-201ENST00000322535 PTPAQ15257 358 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 RASIP1Q5U651 963 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 SCUBE1Q8IWY4 988 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 FBF1Q8TES7 1133 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 AGBL1Q96MI9 1066 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 TRAPPC9Q96Q05 1148 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 DDX23Q9BUQ8 820 aaKnown RBP11.1□□□□□ -0.63
SF3B2-201ENST00000322535 MTFR1LQ9H019 292 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 SUCLA2Q9P2R7 463 aaPredicted RBP11.1□□□□□ -0.63
SF3B2-201ENST00000322535 DAAM1Q9Y4D1 1078 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 FAM205AQ6ZU69 1335 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 TLDC2A0PJX2 215 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 CFAP73A6NFT4 308 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 TCP10L2B9ZVM9 353 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 ENPP1P22413 925 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 HSD17B3P37058 310 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 MSH2P43246 934 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 SERPINB4P48594 390 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 LRRC34Q8IZ02 419 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 ZNF444Q8N0Y2 327 aaPredicted RBP11.1□□□□□ -0.63
SF3B2-201ENST00000322535 SREK1Q8WXA9 508 aaKnown RBP11.1□□□□□ -0.63
SF3B2-201ENST00000322535 P3H4Q92791 437 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 TMEM87BQ96K49 555 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 TCHPQ9BT92 498 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 CCDC113Q9H0I3 377 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 GINM1Q9NU53 330 aa11.1□□□□□ -0.63
SF3B2-201ENST00000322535 ARPP21Q9UBL0 812 aaPredicted RBP11.1□□□□□ -0.63
SF3B2-201ENST00000322535 PDS5AQ29RF7 1337 aaKnown RBP11.09□□□□□ -0.63
SF3B2-201ENST00000322535 BUB1O43683 1085 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 ORC4O43929 436 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 EGFRP00533 1210 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 GSTT2P0CG29 244 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 GSTT2BP0CG30 244 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 ETS2P15036 469 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms