RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 ASAP2O43150 1006 aa23.79■■□□□ 1.4
UBE2D3-201ENST00000321805 MCM7P33993 719 aa23.79■■□□□ 1.4
UBE2D3-201ENST00000321805 GNL2Q13823 731 aaKnown RBP23.79■■□□□ 1.4
UBE2D3-201ENST00000321805 COL19A1Q14993 1142 aa23.79■■□□□ 1.4
UBE2D3-201ENST00000321805 EMC2Q15006 297 aa23.79■■□□□ 1.4
UBE2D3-201ENST00000321805 FAM102BQ5T8I3 360 aa23.79■■□□□ 1.4
UBE2D3-201ENST00000321805 NOL7Q9UMY1 257 aaKnown RBP23.79■■□□□ 1.4
UBE2D3-201ENST00000321805 PCDHB12Q9Y5F1 795 aa23.79■■□□□ 1.4
UBE2D3-201ENST00000321805 MYO7AQ13402 2215 aa23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 SKIP12755 728 aa23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 XRCC6P12956 609 aaKnown RBP eCLIP23.78■■□□□ 1.44e-17■□□□□ 10.6
UBE2D3-201ENST00000321805 IBSPP21815 317 aaPredicted RBP23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 MCM2P49736 904 aa23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 KCNQ1P51787 676 aa23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 UBE3AQ05086 875 aa23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 TCEAL5Q5H9L2 206 aa23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 ABI1Q8IZP0 508 aa23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 ZNF579Q8NAF0 562 aaKnown RBP23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 NLRP4Q96MN2 994 aa23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 UHRF1Q96T88 793 aaPredicted RBP23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 MTRQ99707 1265 aa23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 TMEM60Q9H2L4 133 aa23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 IFT122Q9HBG6 1241 aa23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 MUC3AQ02505 3323 aa23.78■■□□□ 1.4
UBE2D3-201ENST00000321805 DGAT1O75907 488 aa23.77■■□□□ 1.4
UBE2D3-201ENST00000321805 ITGB1P05556 798 aa23.77■■□□□ 1.4
UBE2D3-201ENST00000321805 OR52Z1P0C646 297 aa23.77■■□□□ 1.4
UBE2D3-201ENST00000321805 FGFR1P11362 822 aa23.77■■□□□ 1.4
UBE2D3-201ENST00000321805 LAG3P18627 525 aa23.77■■□□□ 1.4
UBE2D3-201ENST00000321805 SRGAP1Q7Z6B7 1085 aa23.77■■□□□ 1.4
UBE2D3-201ENST00000321805 ZNF598Q86UK7 904 aaKnown RBP23.77■■□□□ 1.4
UBE2D3-201ENST00000321805 LRRC43Q8N309 656 aa23.77■■□□□ 1.4
UBE2D3-201ENST00000321805 KLHL23Q8NBE8 558 aa23.77■■□□□ 1.4
UBE2D3-201ENST00000321805 PRPF31Q8WWY3 499 aaKnown RBP23.77■■□□□ 1.4
UBE2D3-201ENST00000321805 PPP2R3CQ969Q6 453 aa23.77■■□□□ 1.4
UBE2D3-201ENST00000321805 PABPC5Q96DU9 382 aaKnown RBP23.77■■□□□ 1.4
UBE2D3-201ENST00000321805 TUFT1Q9NNX1 390 aa23.77■■□□□ 1.4
UBE2D3-201ENST00000321805 POTEMA6NI47 508 aa23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 TNFRSF10AO00220 468 aa23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 ATP2B1P20020 1258 aa23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 FGFR4P22455 802 aa23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 U2AF2P26368 475 aaKnown RBP eCLIP23.76■■□□□ 1.393e-9■■■□□ 15
UBE2D3-201ENST00000321805 RAB27AP51159 221 aa23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 MXD4Q14582 209 aaPredicted RBP23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 PCBP1Q15365 356 aaKnown RBP eCLIP23.76■■□□□ 1.399e-7■□□□□ 10.8
UBE2D3-201ENST00000321805 LEXMQ3ZCV2 418 aa23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 TTC38Q5R3I4 469 aa23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 SPOUT1Q5T280 376 aaKnown RBP23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 CATSPER4Q7RTX7 472 aa23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 FERMT3Q86UX7 667 aa23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 SPPL3Q8TCT6 385 aa23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 TMEM143Q96AN5 459 aa23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 CCDC43Q96MW1 224 aaKnown RBP23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 ALG13Q9NP73 1137 aaKnown RBP23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 RNF19AQ9NV58 838 aa23.76■■□□□ 1.39
UBE2D3-201ENST00000321805 CSDE1O75534 798 aaKnown RBP23.75■■□□□ 1.39
UBE2D3-201ENST00000321805 LAMTOR4Q0VGL1 99 aa23.75■■□□□ 1.39
UBE2D3-201ENST00000321805 KSR1Q8IVT5 923 aa23.75■■□□□ 1.39
UBE2D3-201ENST00000321805 TBC1D32Q96NH3 1257 aa23.75■■□□□ 1.39
UBE2D3-201ENST00000321805 CASD1Q96PB1 797 aa23.75■■□□□ 1.39
UBE2D3-201ENST00000321805 MRPL9Q9BYD2 267 aaKnown RBP23.75■■□□□ 1.39
UBE2D3-201ENST00000321805 AGPAT5Q9NUQ2 364 aa23.75■■□□□ 1.39
UBE2D3-201ENST00000321805 TYW1Q9NV66 732 aaKnown RBP23.75■■□□□ 1.39
UBE2D3-201ENST00000321805 PIN4Q9Y237 131 aaKnown RBP23.75■■□□□ 1.39
UBE2D3-201ENST00000321805 TCF20Q9UGU0 1960 aaKnown RBP23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 ATF7P17544 494 aaPredicted RBP23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 PHKA2P46019 1235 aa23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 RARRES1P49788 294 aa23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 POU5F1BQ06416 359 aa23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 CAMK1Q14012 370 aa23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 PUS10Q3MIT2 529 aaKnown RBP23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 TWF2Q6IBS0 349 aaKnown RBP23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 COLGALT1Q8NBJ5 622 aa23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 ERMNQ8TAM6 284 aa23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 TMX3Q96JJ7 454 aa23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 POLR3CQ9BUI4 534 aaPredicted RBP23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 CWH43Q9H720 699 aa23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 XPNPEP1Q9NQW7 623 aa23.74■■□□□ 1.39
UBE2D3-201ENST00000321805 PLXNA4Q9HCM2 1894 aa23.73■■□□□ 1.39
UBE2D3-201ENST00000321805 CARNS1A5YM72 827 aa23.73■■□□□ 1.39
UBE2D3-201ENST00000321805 ZBTB39O15060 712 aa23.73■■□□□ 1.39
UBE2D3-201ENST00000321805 ZNF623O75123 536 aa23.73■■□□□ 1.39
UBE2D3-201ENST00000321805 MUTP22033 750 aa23.73■■□□□ 1.39
UBE2D3-201ENST00000321805 KCNA5P22460 613 aa23.73■■□□□ 1.39
UBE2D3-201ENST00000321805 PPM1AP35813 382 aa23.73■■□□□ 1.39
UBE2D3-201ENST00000321805 TFDP1Q14186 410 aa23.73■■□□□ 1.39
UBE2D3-201ENST00000321805 ZNF174Q15697 407 aa23.73■■□□□ 1.39
UBE2D3-201ENST00000321805 HAUS3Q68CZ6 603 aa23.73■■□□□ 1.39
UBE2D3-201ENST00000321805 IFNLR1Q8IU57 520 aaPredicted RBP23.73■■□□□ 1.39
UBE2D3-201ENST00000321805 POF1BQ8WVV4 589 aa23.73■■□□□ 1.39
UBE2D3-201ENST00000321805 LZTS1Q9Y250 596 aa23.73■■□□□ 1.39
UBE2D3-201ENST00000321805 SRGAP2CP0DJJ0 459 aa23.72■■□□□ 1.39
UBE2D3-201ENST00000321805 SPATA31C1P0DKV0 1188 aa23.72■■□□□ 1.39
UBE2D3-201ENST00000321805 RPA1P27694 616 aa23.72■■□□□ 1.39
UBE2D3-201ENST00000321805 CTC1Q2NKJ3 1217 aa23.72■■□□□ 1.39
UBE2D3-201ENST00000321805 CLLU1OSQ5K130 101 aa23.72■■□□□ 1.39
UBE2D3-201ENST00000321805 PDE12Q6L8Q7 609 aaKnown RBP23.72■■□□□ 1.39
UBE2D3-201ENST00000321805 RNF149Q8NC42 400 aa23.72■■□□□ 1.39
UBE2D3-201ENST00000321805 RNF169Q8NCN4 708 aa23.72■■□□□ 1.39
UBE2D3-201ENST00000321805 NFKBIZQ9BYH8 718 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms