RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 EIF3DO15371 548 aaKnown RBP eCLIP16.42■□□□□ 0.22
CSDC2-201ENST00000306149 EXOC3O60645 756 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 LIG3P49916 1009 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 CUL1Q13616 776 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 CEP55Q53EZ4 464 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 ICE2Q659A1 982 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 PHLDB3Q6NSJ2 640 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 LRIG3Q6UXM1 1119 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 LMBR1Q8WVP7 490 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 CALR3Q96L12 384 aaKnown RBP16.42■□□□□ 0.22
CSDC2-201ENST00000306149 LXNQ9BS40 222 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 THAP2Q9H0W7 228 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 SUCLA2Q9P2R7 463 aaPredicted RBP16.42■□□□□ 0.22
CSDC2-201ENST00000306149 STK24Q9Y6E0 443 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 FOXN3O00409 490 aaPredicted RBP16.42■□□□□ 0.22
CSDC2-201ENST00000306149 LSP1P33241 339 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 PPP2R5CQ13362 524 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 MIGA2Q7L4E1 593 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 UBLCP1Q8WVY7 318 aaPredicted RBP16.42■□□□□ 0.22
CSDC2-201ENST00000306149 HES6Q96HZ4 224 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 TRIM51Q9BSJ1 452 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 GLIS2Q9BZE0 524 aaPredicted RBP16.42■□□□□ 0.22
CSDC2-201ENST00000306149 EPN3Q9H201 632 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 AMFRQ9UKV5 643 aa16.42■□□□□ 0.22
CSDC2-201ENST00000306149 SRRM3A6NNA2 597 aaPredicted RBP16.41■□□□□ 0.22
CSDC2-201ENST00000306149 HIP1RO75146 1068 aa16.41■□□□□ 0.22
CSDC2-201ENST00000306149 CTNNA1P35221 906 aaKnown RBP16.41■□□□□ 0.22
CSDC2-201ENST00000306149 DCAF12L1Q5VU92 463 aa16.41■□□□□ 0.22
CSDC2-201ENST00000306149 CC2D2BQ6DHV5 1058 aa16.41■□□□□ 0.22
CSDC2-201ENST00000306149 AADACL2Q6P093 401 aa16.41■□□□□ 0.22
CSDC2-201ENST00000306149 ZSWIM2Q8NEG5 633 aa16.41■□□□□ 0.22
CSDC2-201ENST00000306149 LRRC4CQ9HCJ2 640 aa16.41■□□□□ 0.22
CSDC2-201ENST00000306149 YDJCA8MPS7 323 aa16.41■□□□□ 0.22
CSDC2-201ENST00000306149 MYL7Q01449 175 aa16.41■□□□□ 0.22
CSDC2-201ENST00000306149 DAW1Q8N136 415 aa16.41■□□□□ 0.22
CSDC2-201ENST00000306149 SLC20A1Q8WUM9 679 aa16.41■□□□□ 0.22
CSDC2-201ENST00000306149 CTNNBL1Q8WYA6 563 aaPredicted RBP16.41■□□□□ 0.22
CSDC2-201ENST00000306149 NACC1Q96RE7 527 aa16.41■□□□□ 0.22
CSDC2-201ENST00000306149 ZBTB21Q9ULJ3 1066 aa16.41■□□□□ 0.22
CSDC2-201ENST00000306149 SCAF8Q9UPN6 1271 aaKnown RBP16.41■□□□□ 0.22
CSDC2-201ENST00000306149 MYH11P35749 1972 aa16.41■□□□□ 0.22
CSDC2-201ENST00000306149 H0YIN7 160 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 ENTPD3O75355 529 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 TNFAIP3P21580 790 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 FRMPD4Q14CM0 1322 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 SLC15A2Q16348 729 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 SYCE1Q8N0S2 351 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 ARHGEF10LQ9HCE6 1279 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 APEX2Q9UBZ4 518 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 COG5Q9UP83 839 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 SLX4Q8IY92 1834 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 A0A0A6YYK5 440 aaPredicted RBP16.4■□□□□ 0.22
CSDC2-201ENST00000306149 IPO5O00410 1097 aaKnown RBP16.4■□□□□ 0.22
CSDC2-201ENST00000306149 PPP1R37O75864 691 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 ITGB3BPQ13352 177 aaPredicted RBP16.4■□□□□ 0.22
CSDC2-201ENST00000306149 SUGP1Q8IWZ8 645 aaKnown RBP16.4■□□□□ 0.22
CSDC2-201ENST00000306149 RASGEF1CQ8N431 466 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 RFFLQ8WZ73 363 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 DMAC2Q9NW81 257 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 TMOD4Q9NZQ9 345 aa16.4■□□□□ 0.22
CSDC2-201ENST00000306149 ARHGEF35A5YM69 484 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 H0YGN5 161 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 LMNB1P20700 586 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 INPP5BP32019 993 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 ZNF844Q08AG5 666 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 PTGISQ16647 500 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 ZNF746Q6NUN9 644 aaPredicted RBP16.39■□□□□ 0.21
CSDC2-201ENST00000306149 MMS22LQ6ZRQ5 1243 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 TMBIM4Q9HC24 238 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 TMX2Q9Y320 296 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 NFS1Q9Y697 457 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 ATRNL1Q5VV63 1379 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 TMEM150BA6NC51 233 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 GOLGA6L10A6NI86 522 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 K7ENM7 598 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
CSDC2-201ENST00000306149 USP8P40818 1118 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 ZNF131P52739 623 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 BFSP1Q12934 665 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 GLG1Q92896 1179 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 AKT1S1Q96B36 256 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 SYT11Q9BT88 431 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 ERVK-5Q9HDB9 667 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 UBE2TQ9NPD8 197 aaPredicted RBP16.39■□□□□ 0.21
CSDC2-201ENST00000306149 ACP6Q9NPH0 428 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 INTUQ9ULD6 942 aa16.39■□□□□ 0.21
CSDC2-201ENST00000306149 TMEM110-MUSTN1A8MSY1 372 aa16.38■□□□□ 0.21
CSDC2-201ENST00000306149 CCDC188H7C350 402 aa16.38■□□□□ 0.21
CSDC2-201ENST00000306149 DDX3YO15523 660 aaKnown RBP16.38■□□□□ 0.21
CSDC2-201ENST00000306149 VIL1P09327 827 aaKnown RBP16.38■□□□□ 0.21
CSDC2-201ENST00000306149 MYZAPP0CAP1 466 aa16.38■□□□□ 0.21
CSDC2-201ENST00000306149 HSPA1LP34931 641 aa16.38■□□□□ 0.21
CSDC2-201ENST00000306149 MDH1P40925 334 aaKnown RBP16.38■□□□□ 0.21
CSDC2-201ENST00000306149 GCLMP48507 274 aa16.38■□□□□ 0.21
CSDC2-201ENST00000306149 PPATQ06203 517 aa16.38■□□□□ 0.21
CSDC2-201ENST00000306149 MAPK7Q13164 816 aa16.38■□□□□ 0.21
CSDC2-201ENST00000306149 KAT2BQ92831 832 aa16.38■□□□□ 0.21
CSDC2-201ENST00000306149 LRRC45Q96CN5 670 aa16.38■□□□□ 0.21
CSDC2-201ENST00000306149 AGBL1Q96MI9 1066 aa16.38■□□□□ 0.21
CSDC2-201ENST00000306149 MKNK1Q9BUB5 465 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms