RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 ABCB4P21439 1286 aa16.17■□□□□ 0.18
XRCC1-201ENST00000262887 FGFR4P22455 802 aa16.17■□□□□ 0.18
XRCC1-201ENST00000262887 AUHQ13825 339 aaKnown RBP16.17■□□□□ 0.18
XRCC1-201ENST00000262887 LRRC14Q15048 493 aa16.17■□□□□ 0.18
XRCC1-201ENST00000262887 PDCD2Q16342 344 aaPredicted RBP16.17■□□□□ 0.18
XRCC1-201ENST00000262887 TNFAIP8L3Q5GJ75 292 aa16.17■□□□□ 0.18
XRCC1-201ENST00000262887 THEMIS2Q5TEJ8 643 aa16.17■□□□□ 0.18
XRCC1-201ENST00000262887 C3orf67Q6ZVT6 689 aa16.17■□□□□ 0.18
XRCC1-201ENST00000262887 SH3RF3Q8TEJ3 882 aaPredicted RBP16.17■□□□□ 0.18
XRCC1-201ENST00000262887 RFFLQ8WZ73 363 aa16.17■□□□□ 0.18
XRCC1-201ENST00000262887 RXFP1Q9HBX9 757 aa16.17■□□□□ 0.18
XRCC1-201ENST00000262887 MTRF1LQ9UGC7 380 aaKnown RBP16.17■□□□□ 0.18
XRCC1-201ENST00000262887 GFPT2O94808 682 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 MGARPQ8TDB4 240 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 KCNV2Q8TDN2 545 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 ARHGEF10LQ9HCE6 1279 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 CCDC87Q9NVE4 849 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 GRHL1Q9NZI5 618 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 DDX25Q9UHL0 483 aaKnown RBP16.16■□□□□ 0.18
XRCC1-201ENST00000262887 TRIM33Q9UPN9 1127 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 WFS1O76024 890 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 GJB6O95452 261 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 FESP07332 822 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 JAM2P57087 298 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 PLS1Q14651 629 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 NUGGCQ68CJ6 796 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 INTS5Q6P9B9 1019 aaKnown RBP16.16■□□□□ 0.18
XRCC1-201ENST00000262887 GJB7Q6PEY0 223 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 SPATA21Q7Z572 469 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 FITM2Q8N6M3 262 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 CTNNBL1Q8WYA6 563 aaPredicted RBP16.16■□□□□ 0.18
XRCC1-201ENST00000262887 GCNT4Q9P109 453 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 PCDHA12Q9UN75 941 aa16.16■□□□□ 0.18
XRCC1-201ENST00000262887 AHCYL1O43865 530 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 FERP16591 822 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 ATP4AP20648 1035 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 PDE6BP35913 854 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 EPHA7Q15375 998 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 BARGINQ6ZT62 677 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 EXOC3L1Q86VI1 746 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 LNX1Q8TBB1 728 aaPredicted RBP16.15■□□□□ 0.18
XRCC1-201ENST00000262887 HAS1Q92839 578 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 CELF1Q92879 486 aaKnown RBP16.15■□□□□ 0.18
XRCC1-201ENST00000262887 C18orf8Q96DM3 657 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 EYA3Q99504 573 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 TRIM7Q9C029 511 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 SAP30BPQ9UHR5 308 aaKnown RBP16.15■□□□□ 0.18
XRCC1-201ENST00000262887 RPS6KL1Q9Y6S9 549 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 RIPK2O43353 540 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 NEFHP12036 1026 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 CYP11B2P19099 503 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 CASP5P51878 434 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 GLYCTKQ8IVS8 523 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 TGFBRAP1Q8WUH2 860 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 SIX2Q9NPC8 291 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 PARP2Q9UGN5 583 aa16.15■□□□□ 0.18
XRCC1-201ENST00000262887 THRAP3Q9Y2W1 955 aaKnown RBP16.15■□□□□ 0.18
XRCC1-201ENST00000262887 POTEB3A0JP26 581 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 FAM170AA1A519 330 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 POTECB2RU33 542 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 hCG_1984214I3L0E3 225 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 HIP1RO75146 1068 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 SMARCA1P28370 1054 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 GBP1P32455 592 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 STAT1P42224 750 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 CRKLP46109 303 aaKnown RBP16.14■□□□□ 0.17
XRCC1-201ENST00000262887 RPL21P46778 160 aaKnown RBP16.14■□□□□ 0.17
XRCC1-201ENST00000262887 PPATQ06203 517 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 CLUL1Q15846 466 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 ERFEQ4G0M1 354 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 MFSD5Q6N075 450 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 POTEBQ6S5H4 581 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 ZNF713Q8N859 430 aaPredicted RBP16.14■□□□□ 0.17
XRCC1-201ENST00000262887 PAIP2Q9BPZ3 127 aaKnown RBP16.14■□□□□ 0.17
XRCC1-201ENST00000262887 ZNF287Q9HBT7 754 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 NCANO14594 1321 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 IGSF9BQ9UPX0 1349 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 LAMB2P55268 1798 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 TMEM253P0C7T8 217 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 CTCFP49711 727 aaPredicted RBP16.14■□□□□ 0.17
XRCC1-201ENST00000262887 TRIM68Q6AZZ1 485 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 RAB3IPQ96QF0 476 aaPredicted RBP16.14■□□□□ 0.17
XRCC1-201ENST00000262887 UIMC1Q96RL1 719 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.14■□□□□ 0.17
XRCC1-201ENST00000262887 TMOD4Q9NZQ9 345 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 EIF4E1BA6NMX2 242 aaKnown RBP16.14■□□□□ 0.17
XRCC1-201ENST00000262887 PTGIRP43119 386 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 DIXDC1Q155Q3 683 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 UBE2SQ16763 222 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 TBC1D25Q3MII6 688 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 HYIQ5T013 277 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 SPTY2D1Q68D10 685 aaPredicted RBP16.14■□□□□ 0.17
XRCC1-201ENST00000262887 SLC30A9Q6PML9 568 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 OTUD6AQ7L8S5 288 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 DRAXINQ8NBI3 349 aaPredicted RBP16.14■□□□□ 0.17
XRCC1-201ENST00000262887 TRAF3IP3Q9Y228 551 aa16.14■□□□□ 0.17
XRCC1-201ENST00000262887 FRMPD2Q68DX3 1309 aaPredicted RBP16.13■□□□□ 0.17
XRCC1-201ENST00000262887 TAF1P21675 1872 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 TMEM120BA0PK00 339 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 USP17L5A8MUK1 530 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms