RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Myh10Q61879 1976 aaKnown RBP13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Skor2A7M7C7 1008 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 PrphP15331 475 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Dnajc5P60904 198 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Siah1bQ06985 282 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Acot6Q32Q92 419 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ccdc92bQ5SUE3 299 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 ItgaeQ60677 1167 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Peg10Q7TN75 958 aaKnown RBP13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 TbataQ7TSD4 393 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Llgl1Q80Y17 1036 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Slc17a8Q8BFU8 601 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Apbb1ipQ8R5A3 670 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Xpo6Q924Z6 1125 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Mrpl11Q9CQF0 192 aaKnown RBP13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Snx24Q9CRB0 169 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Fam133bQ9CVI2 245 aaKnown RBP13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 PigoQ9JJI6 1093 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cabp5Q9JLK3 173 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Prkab1Q9R078 270 aa13.96□□□□□ -0.18
Nup88-203ENSMUST00000108531 Astn1Q61137 1302 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ccdc88cQ6VGS5 2009 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 GcP21614 476 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 RxrbP28704 520 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ddr1Q03146 911 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Tex35Q14BK3 207 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Kiaa0319Q5SZV5 1081 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Gas7Q60780 421 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Zbtb7bQ64321 544 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Myo6Q64331 1265 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Trim37Q6PCX9 961 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Skor1Q8BX46 964 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Nemp2Q8CB65 421 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Slf1Q8R3P9 1054 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Pcdha5Q91Y15 934 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ranbp17Q99NF8 1088 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Thumpd2Q9CZB3 528 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ccdc91Q9D8L5 442 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Extl2Q9ES89 330 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Tacc3Q9JJ11 631 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Entpd5Q9WUZ9 427 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Serpinb6cW4VSP4 379 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Gm3127E9Q9P5 263 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Gm3453K7N724 263 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Vmn2r77L7N2B7 854 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Slc27a3O88561 667 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 AfpP02772 605 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Xrcc6P23475 608 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Pon1P52430 355 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Q3TTJ4 293 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Retreg2Q6NS82 541 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Gcfc2Q8BKT3 769 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Fam20aQ8CID3 541 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 OtoaQ8K561 1137 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Tut1Q8R3F9 869 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Reep2Q8VCD6 254 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Slc14a1Q8VHL0 384 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cfap53Q9D439 514 aa13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Drg2Q9QXB9 364 aaKnown RBP13.95□□□□□ -0.18
Nup88-203ENSMUST00000108531 Nrxn2E9Q7X7 1710 aa13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Gm8994E9PV04 411 aaKnown RBP13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Gm38392E9Q2A2 434 aa13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Magea4F2Z493 315 aa13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Spata18Q0P557 537 aa13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Syne3Q4FZC9 975 aa13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Xlr3bQ6P205 226 aa13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cep104Q80V31 926 aa13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Nop53Q8BK35 484 aaKnown RBP13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 PolrmtQ8BKF1 1207 aaKnown RBP13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Lmo3Q8BZL8 145 aa13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Appl2Q8K3G9 662 aa13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Acat1Q8QZT1 424 aa13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Slc25a38Q91XD8 326 aa13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Grhl1Q921D9 618 aa13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Orc1Q9Z1N2 840 aaKnown RBP13.94□□□□□ -0.18
Nup88-203ENSMUST00000108531 Lrrc74aA0A1Y7VMD6 494 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Tbc1d16A2ABG4 766 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Mmrn1B2RPV6 1210 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Zfp266E9Q2S7 604 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Eftud2O08810 971 aaKnown RBP13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Edem3Q2HXL6 931 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Tigd5Q499M4 642 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ttf2Q5NC05 1138 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ssxb10Q6XAR7 170 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Trim47Q8C0E3 641 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 CgasQ8C6L5 507 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Spdl1Q923A2 608 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cep19Q9CQA8 163 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Fam187aQ9D3R5 417 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cmtm5Q9D6G9 156 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ddx20Q9JJY4 825 aaKnown RBP13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Phf2Q9WTU0 1096 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ambra1A2AH22 1300 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Myh14Q6URW6 2000 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Got1P05201 413 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cd68P31996 326 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Msh2P43247 935 aaKnown RBP13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 GalcP54818 684 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Rnf113a2Q14B01 337 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Rgl1Q60695 768 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 109.7 ms