RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Pramel1Q99MW3 458 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ccdc89Q9DA73 370 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Serpina1fQ9DCQ7 411 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Dpp7Q9ET22 506 aa9.88□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Atp7bQ64446 1462 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Zyg11aA2BFL2 627 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tuft1O08970 390 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tuba1bP05213 451 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Casp1P29452 402 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Cyp2c40P56657 491 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tuba1aP68369 451 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Zfp607aQ3TQG9 686 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Slc10a4Q3UEZ8 437 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 E2f8Q58FA4 860 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Abhd15Q5F2F2 459 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 MafkQ61827 156 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 PhkbQ7TSH2 1085 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Fam149aQ8CFV2 787 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Haus3Q8QZX2 570 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Pdlim2Q8R1G6 349 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Vps39Q8R5L3 886 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Rgs20Q9QZB1 239 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Twf2Q9Z0P5 349 aaKnown RBP9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Serpinb3aG3X9V8 387 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Rgsl1H3BL40 1073 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Olfr1154L7MU57 310 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Hmx1O70218 332 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Pde4aO89084 844 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Pdcd2P46718 343 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ccr5P51682 354 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Opa1P58281 960 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Kcnd1Q03719 651 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Slc45a4Q0P5V9 785 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Zbtb16Q3UQ17 673 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tcf12Q61286 706 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Nlrp4fQ66X05 959 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Pkp4Q68FH0 1190 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Erc2Q6PH08 957 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Fgd5Q80UZ0 1219 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Sdhaf3Q8BQU3 125 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Rint1Q8BZ36 792 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Txnl1Q8CDN6 289 aaKnown RBP9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Slc5a11Q8K0E3 673 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Dhx36Q8VHK9 1001 aaKnown RBP9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Psat1Q99K85 370 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Pstpip2Q99M15 334 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Atg3Q9CPX6 314 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Chordc1Q9D1P4 331 aaKnown RBP9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Gm3404Q9D506 307 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Msh5Q9QUM7 833 aa9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tnrc6bQ8BKI2 1810 aaKnown RBP9.87□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Iqcj-Schip1A0A088MLT8 559 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ccdc112A0AUP1 442 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Snx12O70493 165 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Myl3P09542 204 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Schip1P0DPB4 484 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 AladP10518 330 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Gnl1P36916 607 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ppm1aP49443 382 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Lad1P57016 528 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Brip1Q5SXJ3 1174 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ccdc172Q810N9 267 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Mettl24Q8CCB5 363 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Zc3h10Q8R205 435 aaKnown RBP9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Usp3Q91W36 520 aaKnown RBP9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Bicd2Q921C5 820 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Mthfd1Q922D8 935 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 4933421I07RikQ9D420 214 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Gins2Q9D600 185 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ifrd2Q9D8U0 441 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tsga8Q9JJL0 238 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ddx20Q9JJY4 825 aaKnown RBP9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Nfkb2Q9WTK5 899 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Cldn10Q9Z0S6 231 aa9.86□□□□□ -0.83
Upf3b-201ENSMUST00000076265 NinlQ6ZQ12 1394 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Spocd1B1ASB6 936 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 DgkdE9PUQ8 1220 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Dpp4P28843 760 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 DesP31001 469 aaKnown RBP9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Cnr2P47936 347 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Mxd4Q60948 209 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Rcbtb1Q6NXM2 531 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Cdh24Q6PFX6 781 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Kif1bpQ6ZPU9 617 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Dsg1bQ7TSF1 1060 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Idi2Q8BFZ6 227 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Plekhm3Q8BM47 761 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Rasal3Q8C2K5 1041 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tasp1Q8R1G1 420 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Rufy2Q8R4C2 606 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Rprd1bQ9CSU0 326 aaKnown RBP9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Atp5dQ9D3D9 168 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Mfsd2aQ9DA75 534 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Dnase2bQ9QY48 354 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Olfr414E9Q5P8 317 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Kbtbd7G5E8C2 690 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 TpteG5E8H5 664 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Casq1O09165 405 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 HunkO88866 714 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 RelP15307 587 aa9.85□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 71.3 ms