Protein–RNA interactions for Protein: Q9WTK5

Nfkb2, Nuclear factor NF-kappa-B p100 subunit, mousemouse

Predictions only

Length 899 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb2Q9WTK5 Gm25239-201ENSMUST00000174915 86 ntBASIC37.59■■■■□ 3.61
Nfkb2Q9WTK5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
Nfkb2Q9WTK5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Nfkb2Q9WTK5 Gm24109-201ENSMUST00000175489 103 ntBASIC32.98■■■□□ 2.87
Nfkb2Q9WTK5 Gm15042-201ENSMUST00000120212 883 ntBASIC32.2■■■□□ 2.75
Nfkb2Q9WTK5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Nfkb2Q9WTK5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Nfkb2Q9WTK5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Nfkb2Q9WTK5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Nfkb2Q9WTK5 Gm15045-201ENSMUST00000117359 883 ntBASIC31.37■■■□□ 2.61
Nfkb2Q9WTK5 Gm23366-201ENSMUST00000175022 89 ntBASIC31.26■■■□□ 2.59
Nfkb2Q9WTK5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.99■■■□□ 2.55
Nfkb2Q9WTK5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Nfkb2Q9WTK5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.68■■■□□ 2.5
Nfkb2Q9WTK5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Nfkb2Q9WTK5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.62■■■□□ 2.49
Nfkb2Q9WTK5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Nfkb2Q9WTK5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Nfkb2Q9WTK5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Nfkb2Q9WTK5 Gm25238-201ENSMUST00000174914 89 ntBASIC29.89■■■□□ 2.38
Nfkb2Q9WTK5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.88■■■□□ 2.37
Nfkb2Q9WTK5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
Nfkb2Q9WTK5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Nfkb2Q9WTK5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
Nfkb2Q9WTK5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Nfkb2Q9WTK5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Nfkb2Q9WTK5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Nfkb2Q9WTK5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.14■■■□□ 2.26
Nfkb2Q9WTK5 Psd-208ENSMUST00000224556 2034 ntBASIC29.03■■■□□ 2.24
Nfkb2Q9WTK5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.23
Nfkb2Q9WTK5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Nfkb2Q9WTK5 Gm25262-201ENSMUST00000174934 133 ntBASIC28.92■■■□□ 2.22
Nfkb2Q9WTK5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Nfkb2Q9WTK5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Nfkb2Q9WTK5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.68■■■□□ 2.18
Nfkb2Q9WTK5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.67■■■□□ 2.18
Nfkb2Q9WTK5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.64■■■□□ 2.18
Nfkb2Q9WTK5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Nfkb2Q9WTK5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.52■■■□□ 2.16
Nfkb2Q9WTK5 Gm26115-201ENSMUST00000175605 87 ntBASIC28.46■■■□□ 2.15
Nfkb2Q9WTK5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.43■■■□□ 2.14
Nfkb2Q9WTK5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
Nfkb2Q9WTK5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.39■■■□□ 2.14
Nfkb2Q9WTK5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Nfkb2Q9WTK5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
Nfkb2Q9WTK5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.36■■■□□ 2.13
Nfkb2Q9WTK5 Gm8109-201ENSMUST00000194076 746 ntBASIC28.3■■■□□ 2.12
Nfkb2Q9WTK5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Nfkb2Q9WTK5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Nfkb2Q9WTK5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Nfkb2Q9WTK5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Nfkb2Q9WTK5 Gm27325-201ENSMUST00000175467 74 ntBASIC28.06■■■□□ 2.08
Nfkb2Q9WTK5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Nfkb2Q9WTK5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.99■■■□□ 2.07
Nfkb2Q9WTK5 Rab21-202ENSMUST00000218831 843 ntBASIC27.97■■■□□ 2.07
Nfkb2Q9WTK5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.89■■■□□ 2.06
Nfkb2Q9WTK5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Nfkb2Q9WTK5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Nfkb2Q9WTK5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Nfkb2Q9WTK5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.72■■■□□ 2.03
Nfkb2Q9WTK5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Nfkb2Q9WTK5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.64■■■□□ 2.02
Nfkb2Q9WTK5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Nfkb2Q9WTK5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
Nfkb2Q9WTK5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Nfkb2Q9WTK5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.55■■■□□ 2
Nfkb2Q9WTK5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Nfkb2Q9WTK5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Nfkb2Q9WTK5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Nfkb2Q9WTK5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Nfkb2Q9WTK5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Nfkb2Q9WTK5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Nfkb2Q9WTK5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Nfkb2Q9WTK5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Nfkb2Q9WTK5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.28■■□□□ 1.96
Nfkb2Q9WTK5 Gm24804-201ENSMUST00000174982 85 ntBASIC27.25■■□□□ 1.95
Nfkb2Q9WTK5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Nfkb2Q9WTK5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Nfkb2Q9WTK5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Nfkb2Q9WTK5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Nfkb2Q9WTK5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Nfkb2Q9WTK5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Nfkb2Q9WTK5 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.16■■□□□ 1.94
Nfkb2Q9WTK5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Nfkb2Q9WTK5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.12■■□□□ 1.93
Nfkb2Q9WTK5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Nfkb2Q9WTK5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27■■□□□ 1.91
Nfkb2Q9WTK5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
Nfkb2Q9WTK5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.93■■□□□ 1.9
Nfkb2Q9WTK5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.92■■□□□ 1.9
Nfkb2Q9WTK5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Nfkb2Q9WTK5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Nfkb2Q9WTK5 Gm27322-201ENSMUST00000184007 104 ntBASIC26.86■■□□□ 1.89
Nfkb2Q9WTK5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Nfkb2Q9WTK5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Nfkb2Q9WTK5 Zfp131-205ENSMUST00000223812 663 ntBASIC26.76■■□□□ 1.87
Nfkb2Q9WTK5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Nfkb2Q9WTK5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Nfkb2Q9WTK5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.72■■□□□ 1.87
Nfkb2Q9WTK5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 130.9 ms