RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	NOP9	P47077	666 aa	Known RBP	5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	SHE4	P51534	789 aa		5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	SHE10	P53075	577 aa		5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	BMS1	Q08965	1183 aa	Known RBP	5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	KSS1	P14681	368 aa		5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	BLI1	P35727	113 aa		5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	SWH1	P35845	1188 aa		5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	PEX14	P53112	341 aa		5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	YGR111W	P53265	400 aa		5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	TLG1	Q03322	224 aa		5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	NOT5	Q12514	560 aa	Predicted RBP	5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	UTP9	P38882	575 aa	Known RBP	5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	YKE2	P52553	114 aa		5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	GIM3	P53900	129 aa		5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	HPC2	Q01448	625 aa		5.11	□□□□□ -1.59
YDR261C-D	YDR261C-D	SPO1	P53541	631 aa		5.1	□□□□□ -1.59
YDR261C-D	YDR261C-D	PKH1	Q03407	766 aa		5.1	□□□□□ -1.59
YDR261C-D	YDR261C-D	KRE2	P27809	442 aa		5.1	□□□□□ -1.59
YDR261C-D	YDR261C-D	ARP5	P53946	755 aa		5.1	□□□□□ -1.59
YDR261C-D	YDR261C-D	FCP1	Q03254	732 aa		5.1	□□□□□ -1.59
YDR261C-D	YDR261C-D	RRP9	Q06506	573 aa	Known RBP	5.1	□□□□□ -1.59
YDR261C-D	YDR261C-D	UBP1	P25037	809 aa		5.1	□□□□□ -1.59
YDR261C-D	YDR261C-D	MDV1	P47025	714 aa		5.1	□□□□□ -1.59
YDR261C-D	YDR261C-D	BUG1	Q12191	341 aa		5.09	□□□□□ -1.59
YDR261C-D	YDR261C-D	KRR1	P25586	316 aa	Predicted RBP	5.09	□□□□□ -1.59
YDR261C-D	YDR261C-D	GDT1	P38301	280 aa	Predicted RBP	5.09	□□□□□ -1.59
YDR261C-D	YDR261C-D	RAD26	P40352	1085 aa		5.09	□□□□□ -1.59
YDR261C-D	YDR261C-D	RPL6B	P05739	176 aa	Known RBP	5.09	□□□□□ -1.59
YDR261C-D	YDR261C-D	HSE1	P38753	452 aa		5.09	□□□□□ -1.59
YDR261C-D	YDR261C-D	YPP1	P46951	817 aa		5.09	□□□□□ -1.59
YDR261C-D	YDR261C-D	SWI6	P09959	803 aa		5.09	□□□□□ -1.6
YDR261C-D	YDR261C-D	NIP1	P32497	812 aa	Known RBP	5.09	□□□□□ -1.6
YDR261C-D	YDR261C-D	NFU1	P32860	256 aa		5.09	□□□□□ -1.6
YDR261C-D	YDR261C-D	BDP1	P46678	594 aa		5.09	□□□□□ -1.6
YDR261C-D	YDR261C-D	GIR2	Q03768	265 aa	Predicted RBP	5.09	□□□□□ -1.6
YDR261C-D	YDR261C-D	TSR2	Q06672	205 aa	Known RBP	5.09	□□□□□ -1.6
YDR261C-D	YDR261C-D	ATP4	P05626	244 aa		5.08	□□□□□ -1.6
YDR261C-D	YDR261C-D	SPC19	Q03954	165 aa		5.08	□□□□□ -1.6
YDR261C-D	YDR261C-D	CLB3	P24870	427 aa		5.08	□□□□□ -1.6
YDR261C-D	YDR261C-D	POB3	Q04636	552 aa	Known RBP	5.08	□□□□□ -1.6
YDR261C-D	YDR261C-D	ICL2	Q12031	575 aa		5.08	□□□□□ -1.6
YDR261C-D	YDR261C-D	NPL6	P32832	435 aa		5.08	□□□□□ -1.6
YDR261C-D	YDR261C-D	ENV11	P53246	860 aa		5.08	□□□□□ -1.6
YDR261C-D	YDR261C-D	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
YDR261C-D	YDR261C-D	IMP2'	P32351	346 aa		5.08	□□□□□ -1.6
YDR261C-D	YDR261C-D	GEF1	P37020	779 aa		5.08	□□□□□ -1.6
YDR261C-D	YDR261C-D	SEC9	P40357	651 aa		5.08	□□□□□ -1.6
YDR261C-D	YDR261C-D	RKM3	P38222	552 aa		5.07	□□□□□ -1.6
YDR261C-D	YDR261C-D	SSZ1	P38788	538 aa	Known RBP	5.07	□□□□□ -1.6
YDR261C-D	YDR261C-D	EFM5	P53200	248 aa	Known RBP	5.07	□□□□□ -1.6
YDR261C-D	YDR261C-D	YAF9	P53930	226 aa		5.07	□□□□□ -1.6
YDR261C-D	YDR261C-D	ARR1	Q06596	294 aa		5.07	□□□□□ -1.6
YDR261C-D	YDR261C-D	PSR2	Q07949	397 aa		5.07	□□□□□ -1.6
YDR261C-D	YDR261C-D	CDC60	P26637	1090 aa	Known RBP	5.07	□□□□□ -1.6
YDR261C-D	YDR261C-D	DID4	P36108	232 aa		5.07	□□□□□ -1.6
YDR261C-D	YDR261C-D	HAL5	P38970	855 aa	Known RBP	5.07	□□□□□ -1.6
YDR261C-D	YDR261C-D	HIS4	P00815	799 aa	Known RBP	5.07	□□□□□ -1.6
YDR261C-D	YDR261C-D	HOP2	P53187	214 aa		5.07	□□□□□ -1.6
YDR261C-D	YDR261C-D	BEM3	P32873	1128 aa		5.06	□□□□□ -1.6
YDR261C-D	YDR261C-D	FYV6	P53913	173 aa		5.06	□□□□□ -1.6
YDR261C-D	YDR261C-D	GRX3	Q03835	250 aa		5.06	□□□□□ -1.6
YDR261C-D	YDR261C-D	SMY1	P32364	656 aa	Known RBP	5.06	□□□□□ -1.6
YDR261C-D	YDR261C-D	RMD1	Q03441	430 aa		5.06	□□□□□ -1.6
YDR261C-D	YDR261C-D	YIL002W-A	Q3E7Z5	69 aa		5.06	□□□□□ -1.6
YDR261C-D	YDR261C-D	SLA1	P32790	1244 aa		5.06	□□□□□ -1.6
YDR261C-D	YDR261C-D	NIP100	P33420	868 aa		5.06	□□□□□ -1.6
YDR261C-D	YDR261C-D	TIF11	P38912	153 aa	Known RBP	5.06	□□□□□ -1.6
YDR261C-D	YDR261C-D	RCY1	P39531	840 aa		5.06	□□□□□ -1.6
YDR261C-D	YDR261C-D	AIM7	Q12156	149 aa		5.06	□□□□□ -1.6
YDR261C-D	YDR261C-D	DPS1	P04802	557 aa	Known RBP	5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	ACE2	P21192	770 aa		5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	MET4	P32389	672 aa		5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	YKL050C	P35736	922 aa		5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	RRF1	P38771	230 aa		5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	TIM54	P47045	478 aa		5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	RTF1	P53064	558 aa		5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	RPB4	P20433	221 aa	Predicted RBP	5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	PEP7	P32609	515 aa		5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	BRL1	P38770	471 aa		5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	KAR1	P11927	433 aa		5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	IOC3	P43596	787 aa		5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	NOP15	P53927	220 aa	Predicted RBP	5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	RRI2	Q12348	645 aa		5.05	□□□□□ -1.6
YDR261C-D	YDR261C-D	KEX1	P09620	729 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	BIK1	P11709	440 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	BRF1	P29056	596 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	MGA2	P40578	1113 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	ENP2	P48234	707 aa	Known RBP	5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	ASI1	P54074	624 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	PSO2	P30620	661 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	GCD6	P32501	712 aa	Known RBP	5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	SGM1	P47166	707 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	MAK21	Q12176	1025 aa	Known RBP	5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	SSA4	P22202	642 aa	Known RBP	5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	CDC48	P25694	835 aa	Known RBP	5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	UGA3	P26370	528 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	NNT1	Q05874	261 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	OMS1	Q06668	471 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	AVO1	Q08236	1176 aa		5.04	□□□□□ -1.6
YDR261C-D	YDR261C-D	PRP2	P20095	876 aa	Predicted RBP	5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms