RNA–Protein interactions for RNA: ENST00000642082.1

CASC19-277, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-277ENST00000642082 UPF1Q92900 1129 aaKnown RBP eCLIP11.95□□□□□ -0.5
CASC19-277ENST00000642082 SHROOM4Q9ULL8 1493 aa11.95□□□□□ -0.5
CASC19-277ENST00000642082 ZDHHC16Q969W1 377 aa11.93□□□□□ -0.5
CASC19-277ENST00000642082 JPH4Q96JJ6 628 aa11.93□□□□□ -0.5
CASC19-277ENST00000642082 LAPTM4BQ86VI4 370 aa11.92□□□□□ -0.5
CASC19-277ENST00000642082 PROX2Q3B8N5 592 aa11.9□□□□□ -0.5
CASC19-277ENST00000642082 V9GY48 417 aaPredicted RBP11.9□□□□□ -0.5
CASC19-277ENST00000642082 ZFRQ96KR1 1074 aaKnown RBP11.89□□□□□ -0.51
CASC19-277ENST00000642082 PPP1R3GB7ZBB8 358 aa11.88□□□□□ -0.51
CASC19-277ENST00000642082 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
CASC19-277ENST00000642082 PDZRN3Q9UPQ7 1066 aa11.87□□□□□ -0.51
CASC19-277ENST00000642082 EIF4G1Q04637 1599 aaKnown RBP11.86□□□□□ -0.51
CASC19-277ENST00000642082 CC2D2AQ9P2K1 1620 aa11.82□□□□□ -0.52
CASC19-277ENST00000642082 TSR3Q9UJK0 312 aaKnown RBP11.81□□□□□ -0.52
CASC19-277ENST00000642082 COL9A1P20849 921 aa11.8□□□□□ -0.52
CASC19-277ENST00000642082 CECR2Q9BXF3 1484 aa11.79□□□□□ -0.52
CASC19-277ENST00000642082 KIAA1468Q9P260 1216 aa11.79□□□□□ -0.52
CASC19-277ENST00000642082 HPS5Q9UPZ3 1129 aa11.79□□□□□ -0.52
CASC19-277ENST00000642082 LCE2AQ5TA79 106 aaPredicted RBP11.78□□□□□ -0.52
CASC19-277ENST00000642082 PPP1R18Q6NYC8 613 aa11.78□□□□□ -0.52
CASC19-277ENST00000642082 TREML4Q6UXN2 200 aa11.77□□□□□ -0.52
CASC19-277ENST00000642082 LOC100996750A0A140TA64 210 aa11.76□□□□□ -0.53
CASC19-277ENST00000642082 EVI5O60447 810 aa11.76□□□□□ -0.53
CASC19-277ENST00000642082 KRTAP4-6Q9BYQ5 205 aa11.76□□□□□ -0.53
CASC19-277ENST00000642082 TJAP1Q5JTD0 557 aa11.76□□□□□ -0.53
CASC19-277ENST00000642082 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.76□□□□□ -0.53
CASC19-277ENST00000642082 SEPT9Q9UHD8 586 aaPredicted RBP11.75□□□□□ -0.53
CASC19-277ENST00000642082 POTECB2RU33 542 aa11.74□□□□□ -0.53
CASC19-277ENST00000642082 LRCH3Q96II8 777 aa11.72□□□□□ -0.53
CASC19-277ENST00000642082 ONECUT3O60422 494 aaPredicted RBP11.71□□□□□ -0.53
CASC19-277ENST00000642082 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.7□□□□□ -0.54
CASC19-277ENST00000642082 FAM98CQ17RN3 349 aaKnown RBP11.7□□□□□ -0.54
CASC19-277ENST00000642082 PPP1R15BQ5SWA1 713 aa11.68□□□□□ -0.54
CASC19-277ENST00000642082 PCDHGA10Q9Y5H3 936 aa11.68□□□□□ -0.54
CASC19-277ENST00000642082 MYT1Q01538 1121 aa11.67□□□□□ -0.54
CASC19-277ENST00000642082 IL21Q9HBE4 155 aa11.65□□□□□ -0.55
CASC19-277ENST00000642082 STK17AQ9UEE5 414 aa11.65□□□□□ -0.55
CASC19-277ENST00000642082 MTRQ99707 1265 aa11.64□□□□□ -0.55
CASC19-277ENST00000642082 CRISPLD2Q9H0B8 497 aa11.64□□□□□ -0.55
CASC19-277ENST00000642082 PPP4CP60510 307 aa11.62□□□□□ -0.55
CASC19-277ENST00000642082 PKDCCQ504Y2 493 aa11.61□□□□□ -0.55
CASC19-277ENST00000642082 TRIM67Q6ZTA4 783 aa11.61□□□□□ -0.55
CASC19-277ENST00000642082 DGAT1O75907 488 aa11.6□□□□□ -0.55
CASC19-277ENST00000642082 TRIM6-TRIM34B2RNG4 842 aa11.6□□□□□ -0.55
CASC19-277ENST00000642082 FBXW7Q969H0 707 aa11.6□□□□□ -0.55
CASC19-277ENST00000642082 ECM2O94769 699 aaPredicted RBP11.59□□□□□ -0.55
CASC19-277ENST00000642082 TYW1BQ6NUM6 668 aa11.59□□□□□ -0.55
CASC19-277ENST00000642082 ATAD2BQ9ULI0 1458 aa11.58□□□□□ -0.55
CASC19-277ENST00000642082 SMARCA4P51532 1647 aa11.58□□□□□ -0.55
CASC19-277ENST00000642082 ZNF516Q92618 1163 aa11.58□□□□□ -0.56
CASC19-277ENST00000642082 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
CASC19-277ENST00000642082 MROH2BQ7Z745 1585 aa11.56□□□□□ -0.56
CASC19-277ENST00000642082 BAZ1AQ9NRL2 1556 aaPredicted RBP11.56□□□□□ -0.56
CASC19-277ENST00000642082 RGL2O15211 777 aa11.55□□□□□ -0.56
CASC19-277ENST00000642082 MAP3K9P80192 1104 aa11.55□□□□□ -0.56
CASC19-277ENST00000642082 PHF14O94880 888 aa11.52□□□□□ -0.57
CASC19-277ENST00000642082 NKX2-3Q8TAU0 364 aa11.52□□□□□ -0.57
CASC19-277ENST00000642082 SMARCA2P51531 1590 aa11.51□□□□□ -0.57
CASC19-277ENST00000642082 C6orf132Q5T0Z8 1188 aa11.51□□□□□ -0.57
CASC19-277ENST00000642082 GGCXP38435 758 aa11.5□□□□□ -0.57
CASC19-277ENST00000642082 WFS1O76024 890 aa11.5□□□□□ -0.57
CASC19-277ENST00000642082 BAZ1BQ9UIG0 1483 aaKnown RBP11.48□□□□□ -0.57
CASC19-277ENST00000642082 INSM1Q01101 510 aaPredicted RBP11.47□□□□□ -0.57
CASC19-277ENST00000642082 NCKAP5LQ9HCH0 1330 aa11.46□□□□□ -0.57
CASC19-277ENST00000642082 WIPF1O43516 503 aa11.46□□□□□ -0.57
CASC19-277ENST00000642082 TMUB1Q9BVT8 246 aa11.46□□□□□ -0.57
CASC19-277ENST00000642082 PRR20EP86478 221 aa11.45□□□□□ -0.58
CASC19-277ENST00000642082 PRR20CP86479 221 aa11.45□□□□□ -0.58
CASC19-277ENST00000642082 PRR20DP86480 221 aa11.45□□□□□ -0.58
CASC19-277ENST00000642082 PRR20BP86481 221 aa11.45□□□□□ -0.58
CASC19-277ENST00000642082 PRR20AP86496 221 aa11.45□□□□□ -0.58
CASC19-277ENST00000642082 HMGXB3Q12766 1538 aa11.45□□□□□ -0.58
CASC19-277ENST00000642082 PDE4AP27815 886 aa11.45□□□□□ -0.58
CASC19-277ENST00000642082 SAMD7Q7Z3H4 446 aa11.45□□□□□ -0.58
CASC19-277ENST00000642082 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
CASC19-277ENST00000642082 RSF1Q96T23 1441 aaPredicted RBP11.43□□□□□ -0.58
CASC19-277ENST00000642082 FAM187AA6NFU0 413 aa11.43□□□□□ -0.58
CASC19-277ENST00000642082 SLC19A1P41440 591 aa11.43□□□□□ -0.58
CASC19-277ENST00000642082 ST8SIA5O15466 376 aa11.42□□□□□ -0.58
CASC19-277ENST00000642082 PACS2Q86VP3 889 aa11.41□□□□□ -0.58
CASC19-277ENST00000642082 EMID1Q96A84 441 aaPredicted RBP11.41□□□□□ -0.58
CASC19-277ENST00000642082 AAASQ9NRG9 546 aa11.41□□□□□ -0.58
CASC19-277ENST00000642082 EPAS1Q99814 870 aa11.4□□□□□ -0.58
CASC19-277ENST00000642082 WIZO95785 1651 aa11.4□□□□□ -0.58
CASC19-277ENST00000642082 EMILIN3Q9NT22 766 aa11.4□□□□□ -0.59
CASC19-277ENST00000642082 TSKSQ9UJT2 592 aa11.4□□□□□ -0.59
CASC19-277ENST00000642082 NFX1Q12986 1120 aaKnown RBP11.39□□□□□ -0.59
CASC19-277ENST00000642082 APLP1P51693 650 aa11.38□□□□□ -0.59
CASC19-277ENST00000642082 SPRYD7Q5W111 196 aa11.38□□□□□ -0.59
CASC19-277ENST00000642082 ZNF598Q86UK7 904 aaKnown RBP11.38□□□□□ -0.59
CASC19-277ENST00000642082 NESP48681 1621 aa11.37□□□□□ -0.59
CASC19-277ENST00000642082 AMER1Q5JTC6 1135 aaPredicted RBP11.36□□□□□ -0.59
CASC19-277ENST00000642082 RTN4Q9NQC3 1192 aaKnown RBP11.36□□□□□ -0.59
CASC19-277ENST00000642082 DDX27Q96GQ7 796 aaKnown RBP11.35□□□□□ -0.59
CASC19-277ENST00000642082 RBM33Q96EV2 1170 aaKnown RBP11.34□□□□□ -0.59
CASC19-277ENST00000642082 PKD2Q13563 968 aa11.33□□□□□ -0.6
CASC19-277ENST00000642082 LARP6Q9BRS8 491 aaKnown RBP11.33□□□□□ -0.6
CASC19-277ENST00000642082 RNF223E7ERA6 249 aa11.32□□□□□ -0.6
CASC19-277ENST00000642082 SMAPO00193 183 aa11.32□□□□□ -0.6
CASC19-277ENST00000642082 COPS2P61201 443 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms