RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 ONECUT3O60422 494 aaPredicted RBP11.1□□□□□ -0.63
CUL3-216ENST00000617432 GFRA3O60609 400 aa11.1□□□□□ -0.63
CUL3-216ENST00000617432 COL9A1P20849 921 aa11.1□□□□□ -0.63
CUL3-216ENST00000617432 MAP3K9P80192 1104 aa11.1□□□□□ -0.63
CUL3-216ENST00000617432 PCDHGA10Q9Y5H3 936 aa11.09□□□□□ -0.63
CUL3-216ENST00000617432 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
CUL3-216ENST00000617432 KIAA1468Q9P260 1216 aa11.09□□□□□ -0.63
CUL3-216ENST00000617432 FBXW7Q969H0 707 aa11.08□□□□□ -0.64
CUL3-216ENST00000617432 DNAJC5Q9H3Z4 198 aa11.08□□□□□ -0.64
CUL3-216ENST00000617432 TYW1BQ6NUM6 668 aa11.05□□□□□ -0.64
CUL3-216ENST00000617432 CHGAP10645 457 aaKnown RBP11.04□□□□□ -0.64
CUL3-216ENST00000617432 TSR3Q9UJK0 312 aaKnown RBP11.04□□□□□ -0.64
CUL3-216ENST00000617432 PHF14O94880 888 aa11.03□□□□□ -0.64
CUL3-216ENST00000617432 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
CUL3-216ENST00000617432 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.64
CUL3-216ENST00000617432 NRG2O14511 850 aaPredicted RBP11.01□□□□□ -0.65
CUL3-216ENST00000617432 LARP6Q9BRS8 491 aaKnown RBP11.01□□□□□ -0.65
CUL3-216ENST00000617432 FAM98CQ17RN3 349 aaKnown RBP11.01□□□□□ -0.65
CUL3-216ENST00000617432 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.01□□□□□ -0.65
CUL3-216ENST00000617432 SEPT9Q9UHD8 586 aaPredicted RBP11□□□□□ -0.65
CUL3-216ENST00000617432 HPS5Q9UPZ3 1129 aa11□□□□□ -0.65
CUL3-216ENST00000617432 LRCH3Q96II8 777 aa10.99□□□□□ -0.65
CUL3-216ENST00000617432 EMILIN3Q9NT22 766 aa10.98□□□□□ -0.65
CUL3-216ENST00000617432 TRIM6-TRIM34B2RNG4 842 aa10.97□□□□□ -0.65
CUL3-216ENST00000617432 MFSD10Q14728 455 aa10.97□□□□□ -0.65
CUL3-216ENST00000617432 PRKD2Q9BZL6 878 aa10.97□□□□□ -0.65
CUL3-216ENST00000617432 C6orf132Q5T0Z8 1188 aa10.96□□□□□ -0.65
CUL3-216ENST00000617432 EPAS1Q99814 870 aa10.95□□□□□ -0.66
CUL3-216ENST00000617432 ZNF787Q6DD87 383 aa10.93□□□□□ -0.66
CUL3-216ENST00000617432 V9GY48 417 aaPredicted RBP10.93□□□□□ -0.66
CUL3-216ENST00000617432 PPP4CP60510 307 aa10.91□□□□□ -0.66
CUL3-216ENST00000617432 TJAP1Q5JTD0 557 aa10.91□□□□□ -0.66
CUL3-216ENST00000617432 PPP1R18Q6NYC8 613 aa10.86□□□□□ -0.67
CUL3-216ENST00000617432 PACS2Q86VP3 889 aa10.86□□□□□ -0.67
CUL3-216ENST00000617432 IL21Q9HBE4 155 aa10.85□□□□□ -0.67
CUL3-216ENST00000617432 ZNF775Q96BV0 537 aaPredicted RBP10.84□□□□□ -0.67
CUL3-216ENST00000617432 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.84□□□□□ -0.67
CUL3-216ENST00000617432 PDZRN3Q9UPQ7 1066 aa10.84□□□□□ -0.67
CUL3-216ENST00000617432 GTPBP6O43824 516 aaPredicted RBP10.83□□□□□ -0.68
CUL3-216ENST00000617432 RBM33Q96EV2 1170 aaKnown RBP10.83□□□□□ -0.68
CUL3-216ENST00000617432 MTRQ99707 1265 aa10.82□□□□□ -0.68
CUL3-216ENST00000617432 TSKSQ9UJT2 592 aa10.8□□□□□ -0.68
CUL3-216ENST00000617432 SAMD7Q7Z3H4 446 aa10.77□□□□□ -0.68
CUL3-216ENST00000617432 CAMK2BQ13554 666 aa10.76□□□□□ -0.69
CUL3-216ENST00000617432 DPYSL4O14531 572 aa10.75□□□□□ -0.69
CUL3-216ENST00000617432 ZNF516Q92618 1163 aa10.75□□□□□ -0.69
CUL3-216ENST00000617432 GGCXP38435 758 aa10.74□□□□□ -0.69
CUL3-216ENST00000617432 DDX12PQ92771 950 aa10.74□□□□□ -0.69
CUL3-216ENST00000617432 EN1Q05925 392 aaPredicted RBP10.73□□□□□ -0.69
CUL3-216ENST00000617432 MAP3K7O43318 606 aa10.71□□□□□ -0.69
CUL3-216ENST00000617432 SMAPO00193 183 aa10.7□□□□□ -0.7
CUL3-216ENST00000617432 TSR1Q2NL82 804 aaKnown RBP10.7□□□□□ -0.7
CUL3-216ENST00000617432 CDCA7LQ96GN5 454 aa10.7□□□□□ -0.7
CUL3-216ENST00000617432 TMUB1Q9BVT8 246 aa10.7□□□□□ -0.7
CUL3-216ENST00000617432 PRSS12P56730 875 aa10.69□□□□□ -0.7
CUL3-216ENST00000617432 NBR1Q14596 966 aa10.68□□□□□ -0.7
CUL3-216ENST00000617432 CADPS2Q86UW7 1296 aa10.68□□□□□ -0.7
CUL3-216ENST00000617432 NKX2-3Q8TAU0 364 aa10.68□□□□□ -0.7
CUL3-216ENST00000617432 HDGFP51858 240 aaKnown RBP10.67□□□□□ -0.7
CUL3-216ENST00000617432 CERKQ8TCT0 537 aa10.67□□□□□ -0.7
CUL3-216ENST00000617432 TATDN2Q93075 761 aa10.67□□□□□ -0.7
CUL3-216ENST00000617432 NBPF26B4DH59 902 aa10.67□□□□□ -0.7
CUL3-216ENST00000617432 APLP1P51693 650 aa10.67□□□□□ -0.7
CUL3-216ENST00000617432 FAM198AQ9UFP1 575 aa10.67□□□□□ -0.7
CUL3-216ENST00000617432 NECTIN2Q92692 538 aa10.66□□□□□ -0.7
CUL3-216ENST00000617432 PNMA3Q9UL41 463 aa10.65□□□□□ -0.7
CUL3-216ENST00000617432 DGAT1O75907 488 aa10.64□□□□□ -0.71
CUL3-216ENST00000617432 PKDCCQ504Y2 493 aa10.63□□□□□ -0.71
CUL3-216ENST00000617432 C3orf80F5H4A9 247 aa10.62□□□□□ -0.71
CUL3-216ENST00000617432 MYT1Q01538 1121 aa10.62□□□□□ -0.71
CUL3-216ENST00000617432 TRIM67Q6ZTA4 783 aa10.62□□□□□ -0.71
CUL3-216ENST00000617432 RNF40O75150 1001 aa10.61□□□□□ -0.71
CUL3-216ENST00000617432 SLC19A1P41440 591 aa10.59□□□□□ -0.71
CUL3-216ENST00000617432 COPS2P61201 443 aa10.59□□□□□ -0.71
CUL3-216ENST00000617432 PDIA6Q15084 440 aa10.59□□□□□ -0.71
CUL3-216ENST00000617432 SPDYE16A6NNV3 312 aaPredicted RBP10.58□□□□□ -0.72
CUL3-216ENST00000617432 POTECB2RU33 542 aa10.57□□□□□ -0.72
CUL3-216ENST00000617432 ZPR1O75312 459 aa10.57□□□□□ -0.72
CUL3-216ENST00000617432 PRR20EP86478 221 aa10.57□□□□□ -0.72
CUL3-216ENST00000617432 PRR20CP86479 221 aa10.57□□□□□ -0.72
CUL3-216ENST00000617432 PRR20DP86480 221 aa10.57□□□□□ -0.72
CUL3-216ENST00000617432 PRR20BP86481 221 aa10.57□□□□□ -0.72
CUL3-216ENST00000617432 PRR20AP86496 221 aa10.57□□□□□ -0.72
CUL3-216ENST00000617432 NUDT18Q6ZVK8 323 aa10.57□□□□□ -0.72
CUL3-216ENST00000617432 TREML4Q6UXN2 200 aa10.56□□□□□ -0.72
CUL3-216ENST00000617432 SLF2Q8IX21 1173 aa10.56□□□□□ -0.72
CUL3-216ENST00000617432 RBM27Q9P2N5 1060 aaKnown RBP10.55□□□□□ -0.72
CUL3-216ENST00000617432 SPRYD7Q5W111 196 aa10.54□□□□□ -0.72
CUL3-216ENST00000617432 ZNF598Q86UK7 904 aaKnown RBP10.54□□□□□ -0.72
CUL3-216ENST00000617432 RNF223E7ERA6 249 aa10.53□□□□□ -0.72
CUL3-216ENST00000617432 LCE2AQ5TA79 106 aaPredicted RBP10.52□□□□□ -0.73
CUL3-216ENST00000617432 EMID1Q96A84 441 aaPredicted RBP10.52□□□□□ -0.73
CUL3-216ENST00000617432 SWT1Q5T5J6 900 aaKnown RBP10.51□□□□□ -0.73
CUL3-216ENST00000617432 PRR14Q9BWN1 585 aa10.51□□□□□ -0.73
CUL3-216ENST00000617432 SLC4A3P48751 1232 aa10.5□□□□□ -0.73
CUL3-216ENST00000617432 PRIM1P49642 420 aaKnown RBP10.5□□□□□ -0.73
CUL3-216ENST00000617432 FAM187AA6NFU0 413 aa10.49□□□□□ -0.73
CUL3-216ENST00000617432 ANKLE1Q8NAG6 615 aa10.48□□□□□ -0.73
CUL3-216ENST00000617432 PCDHB3Q9Y5E6 796 aa10.48□□□□□ -0.73
CUL3-216ENST00000617432 GRXCR2A6NFK2 248 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms