RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 CRISPLD2Q9H0B8 497 aa8.7□□□□□ -1.02
HMGB1P24-202ENST00000615653 TSR3Q9UJK0 312 aaKnown RBP8.7□□□□□ -1.02
HMGB1P24-202ENST00000615653 RGL2O15211 777 aa8.69□□□□□ -1.02
HMGB1P24-202ENST00000615653 PPP1R15BQ5SWA1 713 aa8.69□□□□□ -1.02
HMGB1P24-202ENST00000615653 KIAA1468Q9P260 1216 aa8.69□□□□□ -1.02
HMGB1P24-202ENST00000615653 PCDHGA10Q9Y5H3 936 aa8.66□□□□□ -1.02
HMGB1P24-202ENST00000615653 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P24-202ENST00000615653 HPS5Q9UPZ3 1129 aa8.65□□□□□ -1.02
HMGB1P24-202ENST00000615653 TJAP1Q5JTD0 557 aa8.64□□□□□ -1.03
HMGB1P24-202ENST00000615653 SEPT9Q9UHD8 586 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P24-202ENST00000615653 PDZRN3Q9UPQ7 1066 aa8.64□□□□□ -1.03
HMGB1P24-202ENST00000615653 FAM98CQ17RN3 349 aaKnown RBP8.63□□□□□ -1.03
HMGB1P24-202ENST00000615653 PPP1R18Q6NYC8 613 aa8.63□□□□□ -1.03
HMGB1P24-202ENST00000615653 LRCH3Q96II8 777 aa8.63□□□□□ -1.03
HMGB1P24-202ENST00000615653 FBXW7Q969H0 707 aa8.62□□□□□ -1.03
HMGB1P24-202ENST00000615653 TYW1BQ6NUM6 668 aa8.6□□□□□ -1.03
HMGB1P24-202ENST00000615653 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.59□□□□□ -1.03
HMGB1P24-202ENST00000615653 TRIM6-TRIM34B2RNG4 842 aa8.58□□□□□ -1.04
HMGB1P24-202ENST00000615653 PHF14O94880 888 aa8.58□□□□□ -1.04
HMGB1P24-202ENST00000615653 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
HMGB1P24-202ENST00000615653 PDE4AP27815 886 aa8.57□□□□□ -1.04
HMGB1P24-202ENST00000615653 IL21Q9HBE4 155 aa8.57□□□□□ -1.04
HMGB1P24-202ENST00000615653 NCKAP5LQ9HCH0 1330 aa8.56□□□□□ -1.04
HMGB1P24-202ENST00000615653 PPP4CP60510 307 aa8.56□□□□□ -1.04
HMGB1P24-202ENST00000615653 PKD2Q13563 968 aa8.56□□□□□ -1.04
HMGB1P24-202ENST00000615653 LCE2AQ5TA79 106 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P24-202ENST00000615653 MTRQ99707 1265 aa8.55□□□□□ -1.04
HMGB1P24-202ENST00000615653 C6orf132Q5T0Z8 1188 aa8.54□□□□□ -1.04
HMGB1P24-202ENST00000615653 TREML4Q6UXN2 200 aa8.54□□□□□ -1.04
HMGB1P24-202ENST00000615653 HS6ST3Q8IZP7 471 aa8.53□□□□□ -1.04
HMGB1P24-202ENST00000615653 POTECB2RU33 542 aa8.52□□□□□ -1.05
HMGB1P24-202ENST00000615653 MYT1Q01538 1121 aa8.51□□□□□ -1.05
HMGB1P24-202ENST00000615653 ZNF516Q92618 1163 aa8.5□□□□□ -1.05
HMGB1P24-202ENST00000615653 EMILIN3Q9NT22 766 aa8.5□□□□□ -1.05
HMGB1P24-202ENST00000615653 TRIM67Q6ZTA4 783 aa8.49□□□□□ -1.05
HMGB1P24-202ENST00000615653 EPAS1Q99814 870 aa8.49□□□□□ -1.05
HMGB1P24-202ENST00000615653 DGAT1O75907 488 aa8.48□□□□□ -1.05
HMGB1P24-202ENST00000615653 DDX27Q96GQ7 796 aaKnown RBP8.47□□□□□ -1.05
HMGB1P24-202ENST00000615653 MFSD10Q14728 455 aa8.46□□□□□ -1.06
HMGB1P24-202ENST00000615653 PKDCCQ504Y2 493 aa8.46□□□□□ -1.06
HMGB1P24-202ENST00000615653 PACS2Q86VP3 889 aa8.46□□□□□ -1.06
HMGB1P24-202ENST00000615653 GGCXP38435 758 aa8.45□□□□□ -1.06
HMGB1P24-202ENST00000615653 NKX2-3Q8TAU0 364 aa8.45□□□□□ -1.06
HMGB1P24-202ENST00000615653 LARP6Q9BRS8 491 aaKnown RBP8.45□□□□□ -1.06
HMGB1P24-202ENST00000615653 TMUB1Q9BVT8 246 aa8.45□□□□□ -1.06
HMGB1P24-202ENST00000615653 RYDENQ9NUL5 291 aaKnown RBP8.45□□□□□ -1.06
HMGB1P24-202ENST00000615653 SAMD7Q7Z3H4 446 aa8.44□□□□□ -1.06
HMGB1P24-202ENST00000615653 DNAJC5Q9H3Z4 198 aa8.44□□□□□ -1.06
HMGB1P24-202ENST00000615653 TSKSQ9UJT2 592 aa8.44□□□□□ -1.06
HMGB1P24-202ENST00000615653 LOC100996750A0A140TA64 210 aa8.43□□□□□ -1.06
HMGB1P24-202ENST00000615653 NKX1-1Q15270 411 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P24-202ENST00000615653 KRTAP4-6Q9BYQ5 205 aa8.43□□□□□ -1.06
HMGB1P24-202ENST00000615653 STK17AQ9UEE5 414 aa8.43□□□□□ -1.06
HMGB1P24-202ENST00000615653 PRR20EP86478 221 aa8.41□□□□□ -1.06
HMGB1P24-202ENST00000615653 PRR20CP86479 221 aa8.41□□□□□ -1.06
HMGB1P24-202ENST00000615653 PRR20DP86480 221 aa8.41□□□□□ -1.06
HMGB1P24-202ENST00000615653 PRR20BP86481 221 aa8.41□□□□□ -1.06
HMGB1P24-202ENST00000615653 PRR20AP86496 221 aa8.41□□□□□ -1.06
HMGB1P24-202ENST00000615653 SLC19A1P41440 591 aa8.38□□□□□ -1.07
HMGB1P24-202ENST00000615653 APLP1P51693 650 aa8.38□□□□□ -1.07
HMGB1P24-202ENST00000615653 RBM33Q96EV2 1170 aaKnown RBP8.38□□□□□ -1.07
HMGB1P24-202ENST00000615653 EMID1Q96A84 441 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P24-202ENST00000615653 SMAPO00193 183 aa8.36□□□□□ -1.07
HMGB1P24-202ENST00000615653 SPRYD7Q5W111 196 aa8.36□□□□□ -1.07
HMGB1P24-202ENST00000615653 ZNF598Q86UK7 904 aaKnown RBP8.36□□□□□ -1.07
HMGB1P24-202ENST00000615653 WFS1O76024 890 aa8.35□□□□□ -1.07
HMGB1P24-202ENST00000615653 CHGAP10645 457 aaKnown RBP8.35□□□□□ -1.07
HMGB1P24-202ENST00000615653 FAM187AA6NFU0 413 aa8.34□□□□□ -1.07
HMGB1P24-202ENST00000615653 WIPF1O43516 503 aa8.34□□□□□ -1.07
HMGB1P24-202ENST00000615653 AAASQ9NRG9 546 aa8.34□□□□□ -1.07
HMGB1P24-202ENST00000615653 FAM198AQ9UFP1 575 aa8.33□□□□□ -1.08
HMGB1P24-202ENST00000615653 RNF223E7ERA6 249 aa8.32□□□□□ -1.08
HMGB1P24-202ENST00000615653 INSM1Q01101 510 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P24-202ENST00000615653 CDCA7LQ96GN5 454 aa8.32□□□□□ -1.08
HMGB1P24-202ENST00000615653 C3orf80F5H4A9 247 aa8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 ST8SIA5O15466 376 aa8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 GDF9O60383 454 aa8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 ZPR1O75312 459 aa8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 COPS2P61201 443 aa8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 EN1Q05925 392 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 TSR1Q2NL82 804 aaKnown RBP8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 TATDN2Q93075 761 aa8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 PRSS12P56730 875 aa8.3□□□□□ -1.08
HMGB1P24-202ENST00000615653 NECTIN2Q92692 538 aa8.3□□□□□ -1.08
HMGB1P24-202ENST00000615653 HDGFP51858 240 aaKnown RBP8.29□□□□□ -1.08
HMGB1P24-202ENST00000615653 DDX12PQ92771 950 aa8.29□□□□□ -1.08
HMGB1P24-202ENST00000615653 PNMA3Q9UL41 463 aa8.29□□□□□ -1.08
HMGB1P24-202ENST00000615653 NBPF26B4DH59 902 aa8.28□□□□□ -1.08
HMGB1P24-202ENST00000615653 NFX1Q12986 1120 aaKnown RBP8.28□□□□□ -1.08
HMGB1P24-202ENST00000615653 CAMK2BQ13554 666 aa8.28□□□□□ -1.08
HMGB1P24-202ENST00000615653 ZNF697Q5TEC3 545 aa8.28□□□□□ -1.08
HMGB1P24-202ENST00000615653 MAP3K7O43318 606 aa8.27□□□□□ -1.09
HMGB1P24-202ENST00000615653 RNF40O75150 1001 aa8.27□□□□□ -1.09
HMGB1P24-202ENST00000615653 DPYSL4O14531 572 aa8.26□□□□□ -1.09
HMGB1P24-202ENST00000615653 LIAT1Q6ZQX7 453 aa8.26□□□□□ -1.09
HMGB1P24-202ENST00000615653 CRIPAKQ8N1N5 446 aa8.26□□□□□ -1.09
HMGB1P24-202ENST00000615653 ANKLE1Q8NAG6 615 aa8.26□□□□□ -1.09
HMGB1P24-202ENST00000615653 TNFRSF10AO00220 468 aa8.25□□□□□ -1.09
HMGB1P24-202ENST00000615653 CERKQ8TCT0 537 aa8.25□□□□□ -1.09
HMGB1P24-202ENST00000615653 NBR1Q14596 966 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms