RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 CRISPLD2Q9H0B8 497 aa8.7□□□□□ -1.02
HMGB1P24-202ENST00000615653 TSR3Q9UJK0 312 aaKnown RBP8.7□□□□□ -1.02
HMGB1P24-202ENST00000615653 RGL2O15211 777 aa8.69□□□□□ -1.02
HMGB1P24-202ENST00000615653 PPP1R15BQ5SWA1 713 aa8.69□□□□□ -1.02
HMGB1P24-202ENST00000615653 KIAA1468Q9P260 1216 aa8.69□□□□□ -1.02
HMGB1P24-202ENST00000615653 PCDHGA10Q9Y5H3 936 aa8.66□□□□□ -1.02
HMGB1P24-202ENST00000615653 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P24-202ENST00000615653 HPS5Q9UPZ3 1129 aa8.65□□□□□ -1.02
HMGB1P24-202ENST00000615653 TJAP1Q5JTD0 557 aa8.64□□□□□ -1.03
HMGB1P24-202ENST00000615653 SEPT9Q9UHD8 586 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P24-202ENST00000615653 PDZRN3Q9UPQ7 1066 aa8.64□□□□□ -1.03
HMGB1P24-202ENST00000615653 FAM98CQ17RN3 349 aaKnown RBP8.63□□□□□ -1.03
HMGB1P24-202ENST00000615653 PPP1R18Q6NYC8 613 aa8.63□□□□□ -1.03
HMGB1P24-202ENST00000615653 LRCH3Q96II8 777 aa8.63□□□□□ -1.03
HMGB1P24-202ENST00000615653 FBXW7Q969H0 707 aa8.62□□□□□ -1.03
HMGB1P24-202ENST00000615653 TYW1BQ6NUM6 668 aa8.6□□□□□ -1.03
HMGB1P24-202ENST00000615653 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.59□□□□□ -1.03
HMGB1P24-202ENST00000615653 TRIM6-TRIM34B2RNG4 842 aa8.58□□□□□ -1.04
HMGB1P24-202ENST00000615653 PHF14O94880 888 aa8.58□□□□□ -1.04
HMGB1P24-202ENST00000615653 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
HMGB1P24-202ENST00000615653 PDE4AP27815 886 aa8.57□□□□□ -1.04
HMGB1P24-202ENST00000615653 IL21Q9HBE4 155 aa8.57□□□□□ -1.04
HMGB1P24-202ENST00000615653 NCKAP5LQ9HCH0 1330 aa8.56□□□□□ -1.04
HMGB1P24-202ENST00000615653 PPP4CP60510 307 aa8.56□□□□□ -1.04
HMGB1P24-202ENST00000615653 PKD2Q13563 968 aa8.56□□□□□ -1.04
HMGB1P24-202ENST00000615653 LCE2AQ5TA79 106 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P24-202ENST00000615653 MTRQ99707 1265 aa8.55□□□□□ -1.04
HMGB1P24-202ENST00000615653 C6orf132Q5T0Z8 1188 aa8.54□□□□□ -1.04
HMGB1P24-202ENST00000615653 TREML4Q6UXN2 200 aa8.54□□□□□ -1.04
HMGB1P24-202ENST00000615653 HS6ST3Q8IZP7 471 aa8.53□□□□□ -1.04
HMGB1P24-202ENST00000615653 POTECB2RU33 542 aa8.52□□□□□ -1.05
HMGB1P24-202ENST00000615653 MYT1Q01538 1121 aa8.51□□□□□ -1.05
HMGB1P24-202ENST00000615653 ZNF516Q92618 1163 aa8.5□□□□□ -1.05
HMGB1P24-202ENST00000615653 EMILIN3Q9NT22 766 aa8.5□□□□□ -1.05
HMGB1P24-202ENST00000615653 TRIM67Q6ZTA4 783 aa8.49□□□□□ -1.05
HMGB1P24-202ENST00000615653 EPAS1Q99814 870 aa8.49□□□□□ -1.05
HMGB1P24-202ENST00000615653 DGAT1O75907 488 aa8.48□□□□□ -1.05
HMGB1P24-202ENST00000615653 DDX27Q96GQ7 796 aaKnown RBP8.47□□□□□ -1.05
HMGB1P24-202ENST00000615653 MFSD10Q14728 455 aa8.46□□□□□ -1.06
HMGB1P24-202ENST00000615653 PKDCCQ504Y2 493 aa8.46□□□□□ -1.06
HMGB1P24-202ENST00000615653 PACS2Q86VP3 889 aa8.46□□□□□ -1.06
HMGB1P24-202ENST00000615653 GGCXP38435 758 aa8.45□□□□□ -1.06
HMGB1P24-202ENST00000615653 NKX2-3Q8TAU0 364 aa8.45□□□□□ -1.06
HMGB1P24-202ENST00000615653 LARP6Q9BRS8 491 aaKnown RBP8.45□□□□□ -1.06
HMGB1P24-202ENST00000615653 TMUB1Q9BVT8 246 aa8.45□□□□□ -1.06
HMGB1P24-202ENST00000615653 RYDENQ9NUL5 291 aaKnown RBP8.45□□□□□ -1.06
HMGB1P24-202ENST00000615653 SAMD7Q7Z3H4 446 aa8.44□□□□□ -1.06
HMGB1P24-202ENST00000615653 DNAJC5Q9H3Z4 198 aa8.44□□□□□ -1.06
HMGB1P24-202ENST00000615653 TSKSQ9UJT2 592 aa8.44□□□□□ -1.06
HMGB1P24-202ENST00000615653 LOC100996750A0A140TA64 210 aa8.43□□□□□ -1.06
HMGB1P24-202ENST00000615653 NKX1-1Q15270 411 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P24-202ENST00000615653 KRTAP4-6Q9BYQ5 205 aa8.43□□□□□ -1.06
HMGB1P24-202ENST00000615653 STK17AQ9UEE5 414 aa8.43□□□□□ -1.06
HMGB1P24-202ENST00000615653 PRR20EP86478 221 aa8.41□□□□□ -1.06
HMGB1P24-202ENST00000615653 PRR20CP86479 221 aa8.41□□□□□ -1.06
HMGB1P24-202ENST00000615653 PRR20DP86480 221 aa8.41□□□□□ -1.06
HMGB1P24-202ENST00000615653 PRR20BP86481 221 aa8.41□□□□□ -1.06
HMGB1P24-202ENST00000615653 PRR20AP86496 221 aa8.41□□□□□ -1.06
HMGB1P24-202ENST00000615653 SLC19A1P41440 591 aa8.38□□□□□ -1.07
HMGB1P24-202ENST00000615653 APLP1P51693 650 aa8.38□□□□□ -1.07
HMGB1P24-202ENST00000615653 RBM33Q96EV2 1170 aaKnown RBP8.38□□□□□ -1.07
HMGB1P24-202ENST00000615653 EMID1Q96A84 441 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P24-202ENST00000615653 SMAPO00193 183 aa8.36□□□□□ -1.07
HMGB1P24-202ENST00000615653 SPRYD7Q5W111 196 aa8.36□□□□□ -1.07
HMGB1P24-202ENST00000615653 ZNF598Q86UK7 904 aaKnown RBP8.36□□□□□ -1.07
HMGB1P24-202ENST00000615653 WFS1O76024 890 aa8.35□□□□□ -1.07
HMGB1P24-202ENST00000615653 CHGAP10645 457 aaKnown RBP8.35□□□□□ -1.07
HMGB1P24-202ENST00000615653 FAM187AA6NFU0 413 aa8.34□□□□□ -1.07
HMGB1P24-202ENST00000615653 WIPF1O43516 503 aa8.34□□□□□ -1.07
HMGB1P24-202ENST00000615653 AAASQ9NRG9 546 aa8.34□□□□□ -1.07
HMGB1P24-202ENST00000615653 FAM198AQ9UFP1 575 aa8.33□□□□□ -1.08
HMGB1P24-202ENST00000615653 RNF223E7ERA6 249 aa8.32□□□□□ -1.08
HMGB1P24-202ENST00000615653 INSM1Q01101 510 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P24-202ENST00000615653 CDCA7LQ96GN5 454 aa8.32□□□□□ -1.08
HMGB1P24-202ENST00000615653 C3orf80F5H4A9 247 aa8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 ST8SIA5O15466 376 aa8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 GDF9O60383 454 aa8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 ZPR1O75312 459 aa8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 COPS2P61201 443 aa8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 EN1Q05925 392 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 TSR1Q2NL82 804 aaKnown RBP8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 TATDN2Q93075 761 aa8.31□□□□□ -1.08
HMGB1P24-202ENST00000615653 PRSS12P56730 875 aa8.3□□□□□ -1.08
HMGB1P24-202ENST00000615653 NECTIN2Q92692 538 aa8.3□□□□□ -1.08
HMGB1P24-202ENST00000615653 HDGFP51858 240 aaKnown RBP8.29□□□□□ -1.08
HMGB1P24-202ENST00000615653 DDX12PQ92771 950 aa8.29□□□□□ -1.08
HMGB1P24-202ENST00000615653 PNMA3Q9UL41 463 aa8.29□□□□□ -1.08
HMGB1P24-202ENST00000615653 NBPF26B4DH59 902 aa8.28□□□□□ -1.08
HMGB1P24-202ENST00000615653 NFX1Q12986 1120 aaKnown RBP8.28□□□□□ -1.08
HMGB1P24-202ENST00000615653 CAMK2BQ13554 666 aa8.28□□□□□ -1.08
HMGB1P24-202ENST00000615653 ZNF697Q5TEC3 545 aa8.28□□□□□ -1.08
HMGB1P24-202ENST00000615653 MAP3K7O43318 606 aa8.27□□□□□ -1.09
HMGB1P24-202ENST00000615653 RNF40O75150 1001 aa8.27□□□□□ -1.09
HMGB1P24-202ENST00000615653 DPYSL4O14531 572 aa8.26□□□□□ -1.09
HMGB1P24-202ENST00000615653 LIAT1Q6ZQX7 453 aa8.26□□□□□ -1.09
HMGB1P24-202ENST00000615653 CRIPAKQ8N1N5 446 aa8.26□□□□□ -1.09
HMGB1P24-202ENST00000615653 ANKLE1Q8NAG6 615 aa8.26□□□□□ -1.09
HMGB1P24-202ENST00000615653 TNFRSF10AO00220 468 aa8.25□□□□□ -1.09
HMGB1P24-202ENST00000615653 CERKQ8TCT0 537 aa8.25□□□□□ -1.09
HMGB1P24-202ENST00000615653 NBR1Q14596 966 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms