RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 TRIM6-TRIM34B2RNG4 842 aa19.61■□□□□ 0.73
TNXB-208ENST00000611016 GTF2E1P29083 439 aaPredicted RBP19.6■□□□□ 0.73
TNXB-208ENST00000611016 PHLDB1Q86UU1 1377 aa19.6■□□□□ 0.73
TNXB-208ENST00000611016 HMMRO75330 724 aa19.6■□□□□ 0.73
TNXB-208ENST00000611016 PMFBP1Q8TBY8 1022 aa19.6■□□□□ 0.73
TNXB-208ENST00000611016 TCERG1O14776 1098 aaKnown RBP19.6■□□□□ 0.73
TNXB-208ENST00000611016 ST20-MTHFSA0A0A6YYL1 179 aa19.59■□□□□ 0.73
TNXB-208ENST00000611016 UACAQ9BZF9 1416 aa19.59■□□□□ 0.73
TNXB-208ENST00000611016 MSNP26038 577 aaKnown RBP19.59■□□□□ 0.73
TNXB-208ENST00000611016 EVA1CP58658 441 aa19.59■□□□□ 0.73
TNXB-208ENST00000611016 COG3Q96JB2 828 aa19.58■□□□□ 0.73
TNXB-208ENST00000611016 PANK3Q9H999 370 aa19.58■□□□□ 0.73
TNXB-208ENST00000611016 RRP7AQ9Y3A4 280 aaKnown RBP19.58■□□□□ 0.72
TNXB-208ENST00000611016 PDE3BQ13370 1112 aa19.57■□□□□ 0.72
TNXB-208ENST00000611016 DRC7Q8IY82 874 aa19.57■□□□□ 0.72
TNXB-208ENST00000611016 CENPJQ9HC77 1338 aaPredicted RBP19.57■□□□□ 0.72
TNXB-208ENST00000611016 MINK1Q8N4C8 1332 aaPredicted RBP19.56■□□□□ 0.72
TNXB-208ENST00000611016 NCBP3Q53F19 620 aaKnown RBP19.56■□□□□ 0.72
TNXB-208ENST00000611016 EVC2Q86UK5 1308 aa19.55■□□□□ 0.72
TNXB-208ENST00000611016 SYAP1Q96A49 352 aaPredicted RBP19.55■□□□□ 0.72
TNXB-208ENST00000611016 FAM69CQ0P6D2 419 aa19.54■□□□□ 0.72
TNXB-208ENST00000611016 FRAT2O75474 233 aaPredicted RBP19.54■□□□□ 0.72
TNXB-208ENST00000611016 C1orf141Q5JVX7 400 aa19.54■□□□□ 0.72
TNXB-208ENST00000611016 RBM19Q9Y4C8 960 aaKnown RBP19.53■□□□□ 0.72
TNXB-208ENST00000611016 HSP90B1P14625 803 aaKnown RBP19.53■□□□□ 0.72
TNXB-208ENST00000611016 MFAP1P55081 439 aaKnown RBP19.53■□□□□ 0.72
TNXB-208ENST00000611016 KIF15Q9NS87 1388 aa19.53■□□□□ 0.72
TNXB-208ENST00000611016 RUSC2Q8N2Y8 1516 aa19.53■□□□□ 0.72
TNXB-208ENST00000611016 CCDC34Q96HJ3 373 aa19.51■□□□□ 0.71
TNXB-208ENST00000611016 ELL2O00472 640 aaPredicted RBP19.51■□□□□ 0.71
TNXB-208ENST00000611016 CGNL1Q0VF96 1302 aa19.51■□□□□ 0.71
TNXB-208ENST00000611016 GAPVD1Q14C86 1478 aa19.5■□□□□ 0.71
TNXB-208ENST00000611016 DEKP35659 375 aaKnown RBP19.5■□□□□ 0.71
TNXB-208ENST00000611016 CSPP1Q1MSJ5 1256 aa19.49■□□□□ 0.71
TNXB-208ENST00000611016 MYBBP1AQ9BQG0 1328 aaKnown RBP19.49■□□□□ 0.71
TNXB-208ENST00000611016 RTN4Q9NQC3 1192 aaKnown RBP19.48■□□□□ 0.71
TNXB-208ENST00000611016 TOMM22Q9NS69 142 aa19.48■□□□□ 0.71
TNXB-208ENST00000611016 SLKQ9H2G2 1235 aaPredicted RBP19.47■□□□□ 0.71
TNXB-208ENST00000611016 TPM4P67936 248 aa19.47■□□□□ 0.71
TNXB-208ENST00000611016 KIAA2012Q0VF49 1180 aa19.47■□□□□ 0.71
TNXB-208ENST00000611016 MSH5O43196 834 aa19.47■□□□□ 0.71
TNXB-208ENST00000611016 FGD5Q6ZNL6 1462 aa19.46■□□□□ 0.71
TNXB-208ENST00000611016 PSME1Q06323 249 aa19.46■□□□□ 0.71
TNXB-208ENST00000611016 TEFQ10587 303 aa19.46■□□□□ 0.71
TNXB-208ENST00000611016 RAD54L2Q9Y4B4 1467 aa19.46■□□□□ 0.71
TNXB-208ENST00000611016 NOL8Q76FK4 1167 aaKnown RBP19.45■□□□□ 0.7
TNXB-208ENST00000611016 NGEFQ8N5V2 710 aa19.44■□□□□ 0.7
TNXB-208ENST00000611016 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
TNXB-208ENST00000611016 TTC5Q8N0Z6 440 aa19.43■□□□□ 0.7
TNXB-208ENST00000611016 BCL2L13Q9BXK5 485 aa19.43■□□□□ 0.7
TNXB-208ENST00000611016 MEX3CQ5U5Q3 659 aaKnown RBP19.42■□□□□ 0.7
TNXB-208ENST00000611016 CHMP4CQ96CF2 233 aa19.42■□□□□ 0.7
TNXB-208ENST00000611016 USP47Q96K76 1375 aa19.41■□□□□ 0.7
TNXB-208ENST00000611016 EIF2S2P20042 333 aaKnown RBP19.41■□□□□ 0.7
TNXB-208ENST00000611016 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.4■□□□□ 0.7
TNXB-208ENST00000611016 SYTL4Q96C24 671 aaPredicted RBP19.4■□□□□ 0.7
TNXB-208ENST00000611016 GZF1Q9H116 711 aaPredicted RBP19.39■□□□□ 0.7
TNXB-208ENST00000611016 RASSF8Q8NHQ8 419 aa19.39■□□□□ 0.69
TNXB-208ENST00000611016 DHX57Q6P158 1386 aaKnown RBP19.39■□□□□ 0.69
TNXB-208ENST00000611016 TSHZ2Q9NRE2 1034 aa19.38■□□□□ 0.69
TNXB-208ENST00000611016 IGF1RP08069 1367 aa19.38■□□□□ 0.69
TNXB-208ENST00000611016 FOXD4L1Q9NU39 408 aa19.38■□□□□ 0.69
TNXB-208ENST00000611016 KIF3AQ9Y496 699 aa19.38■□□□□ 0.69
TNXB-208ENST00000611016 AQRO60306 1485 aaKnown RBP eCLIP19.38■□□□□ 0.693e-8■■■■□ 25.5
TNXB-208ENST00000611016 DIAPH1O60610 1272 aaKnown RBP19.37■□□□□ 0.69
TNXB-208ENST00000611016 AMER1Q5JTC6 1135 aaPredicted RBP19.37■□□□□ 0.69
TNXB-208ENST00000611016 ZNF644Q9H582 1327 aaPredicted RBP19.37■□□□□ 0.69
TNXB-208ENST00000611016 RILPL2Q969X0 211 aa19.37■□□□□ 0.69
TNXB-208ENST00000611016 PRDM2Q13029 1718 aa19.36■□□□□ 0.69
TNXB-208ENST00000611016 MYOM3Q5VTT5 1437 aa19.36■□□□□ 0.69
TNXB-208ENST00000611016 NEXNQ0ZGT2 675 aa19.36■□□□□ 0.69
TNXB-208ENST00000611016 NECTIN2Q92692 538 aa19.35■□□□□ 0.69
TNXB-208ENST00000611016 E9PSI1 815 aa19.35■□□□□ 0.69
TNXB-208ENST00000611016 ATF3P18847 181 aa19.34■□□□□ 0.69
TNXB-208ENST00000611016 USP35Q9P2H5 1018 aa19.34■□□□□ 0.69
TNXB-208ENST00000611016 ANKRD45Q5TZF3 282 aa19.34■□□□□ 0.69
TNXB-208ENST00000611016 VPS53Q5VIR6 699 aa19.34■□□□□ 0.69
TNXB-208ENST00000611016 ZKSCAN2Q63HK3 967 aa19.34■□□□□ 0.69
TNXB-208ENST00000611016 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.34■□□□□ 0.69
TNXB-208ENST00000611016 PHF14O94880 888 aa19.34■□□□□ 0.69
TNXB-208ENST00000611016 C9orf78Q9NZ63 289 aaPredicted RBP19.33■□□□□ 0.68
TNXB-208ENST00000611016 APAF1O14727 1248 aa19.32■□□□□ 0.68
TNXB-208ENST00000611016 MARCH6O60337 910 aa19.32■□□□□ 0.68
TNXB-208ENST00000611016 KIF16BQ96L93 1317 aa19.32■□□□□ 0.68
TNXB-208ENST00000611016 PLIN1O60240 522 aa19.32■□□□□ 0.68
TNXB-208ENST00000611016 ST18O60284 1047 aa19.31■□□□□ 0.68
TNXB-208ENST00000611016 PRKRIP1Q9H875 184 aaPredicted RBP19.3■□□□□ 0.68
TNXB-208ENST00000611016 RIPK4P57078 832 aa19.3■□□□□ 0.68
TNXB-208ENST00000611016 CREBRFQ8IUR6 639 aa19.3■□□□□ 0.68
TNXB-208ENST00000611016 GOLGA6L3A6NEY3 463 aa19.28■□□□□ 0.68
TNXB-208ENST00000611016 FOXD4L5Q5VV16 416 aaPredicted RBP19.28■□□□□ 0.68
TNXB-208ENST00000611016 FOXD4L4Q8WXT5 416 aaPredicted RBP19.28■□□□□ 0.68
TNXB-208ENST00000611016 IPO9Q96P70 1041 aaKnown RBP19.28■□□□□ 0.68
TNXB-208ENST00000611016 NUTM2GQ5VZR2 741 aa19.28■□□□□ 0.68
TNXB-208ENST00000611016 COG6Q9Y2V7 657 aa19.26■□□□□ 0.67
TNXB-208ENST00000611016 STAC3Q96MF2 364 aa19.26■□□□□ 0.67
TNXB-208ENST00000611016 SF3A1Q15459 793 aaKnown RBP19.26■□□□□ 0.67
TNXB-208ENST00000611016 RAPGEF4Q8WZA2 1011 aa19.25■□□□□ 0.67
TNXB-208ENST00000611016 NOL10Q9BSC4 688 aaKnown RBP19.25■□□□□ 0.67
TNXB-208ENST00000611016 DDX58O95786 925 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms