RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 HPS5Q9UPZ3 1129 aa8.95□□□□□ -0.98
KPNB1-208ENST00000580019 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.94□□□□□ -0.98
KPNB1-208ENST00000580019 COL9A1P20849 921 aa8.93□□□□□ -0.98
KPNB1-208ENST00000580019 LRCH3Q96II8 777 aa8.93□□□□□ -0.98
KPNB1-208ENST00000580019 ONECUT3O60422 494 aaPredicted RBP8.92□□□□□ -0.98
KPNB1-208ENST00000580019 PPP1R18Q6NYC8 613 aa8.91□□□□□ -0.98
KPNB1-208ENST00000580019 FAM98CQ17RN3 349 aaKnown RBP8.9□□□□□ -0.98
KPNB1-208ENST00000580019 SEPT9Q9UHD8 586 aaPredicted RBP8.9□□□□□ -0.98
KPNB1-208ENST00000580019 TJAP1Q5JTD0 557 aa8.89□□□□□ -0.99
KPNB1-208ENST00000580019 PPP1R15BQ5SWA1 713 aa8.89□□□□□ -0.99
KPNB1-208ENST00000580019 TREML4Q6UXN2 200 aa8.89□□□□□ -0.99
KPNB1-208ENST00000580019 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.88□□□□□ -0.99
KPNB1-208ENST00000580019 ECM2O94769 699 aaPredicted RBP8.87□□□□□ -0.99
KPNB1-208ENST00000580019 FBXW7Q969H0 707 aa8.86□□□□□ -0.99
KPNB1-208ENST00000580019 PCDHGA10Q9Y5H3 936 aa8.86□□□□□ -0.99
KPNB1-208ENST00000580019 PPP4CP60510 307 aa8.85□□□□□ -0.99
KPNB1-208ENST00000580019 CRISPLD2Q9H0B8 497 aa8.85□□□□□ -0.99
KPNB1-208ENST00000580019 IL21Q9HBE4 155 aa8.85□□□□□ -0.99
KPNB1-208ENST00000580019 LCE2AQ5TA79 106 aaPredicted RBP8.84□□□□□ -0.99
KPNB1-208ENST00000580019 TYW1BQ6NUM6 668 aa8.83□□□□□ -1
KPNB1-208ENST00000580019 STK17AQ9UEE5 414 aa8.83□□□□□ -1
KPNB1-208ENST00000580019 POTECB2RU33 542 aa8.82□□□□□ -1
KPNB1-208ENST00000580019 MYT1Q01538 1121 aa8.82□□□□□ -1
KPNB1-208ENST00000580019 PKDCCQ504Y2 493 aa8.82□□□□□ -1
KPNB1-208ENST00000580019 MTRQ99707 1265 aa8.82□□□□□ -1
KPNB1-208ENST00000580019 LOC100996750A0A140TA64 210 aa8.81□□□□□ -1
KPNB1-208ENST00000580019 TRIM6-TRIM34B2RNG4 842 aa8.81□□□□□ -1
KPNB1-208ENST00000580019 DGAT1O75907 488 aa8.81□□□□□ -1
KPNB1-208ENST00000580019 MAP3K9P80192 1104 aa8.81□□□□□ -1
KPNB1-208ENST00000580019 KRTAP4-6Q9BYQ5 205 aa8.81□□□□□ -1
KPNB1-208ENST00000580019 RGL2O15211 777 aa8.79□□□□□ -1
KPNB1-208ENST00000580019 GGCXP38435 758 aa8.79□□□□□ -1
KPNB1-208ENST00000580019 PHF14O94880 888 aa8.78□□□□□ -1
KPNB1-208ENST00000580019 PDE4AP27815 886 aa8.75□□□□□ -1.01
KPNB1-208ENST00000580019 C6orf132Q5T0Z8 1188 aa8.75□□□□□ -1.01
KPNB1-208ENST00000580019 TRIM67Q6ZTA4 783 aa8.75□□□□□ -1.01
KPNB1-208ENST00000580019 ZNF516Q92618 1163 aa8.75□□□□□ -1.01
KPNB1-208ENST00000580019 TMUB1Q9BVT8 246 aa8.73□□□□□ -1.01
KPNB1-208ENST00000580019 INSM1Q01101 510 aaPredicted RBP8.71□□□□□ -1.02
KPNB1-208ENST00000580019 PACS2Q86VP3 889 aa8.71□□□□□ -1.02
KPNB1-208ENST00000580019 EPAS1Q99814 870 aa8.71□□□□□ -1.02
KPNB1-208ENST00000580019 NCKAP5LQ9HCH0 1330 aa8.71□□□□□ -1.02
KPNB1-208ENST00000580019 WFS1O76024 890 aa8.7□□□□□ -1.02
KPNB1-208ENST00000580019 NKX2-3Q8TAU0 364 aa8.7□□□□□ -1.02
KPNB1-208ENST00000580019 PRR20EP86478 221 aa8.69□□□□□ -1.02
KPNB1-208ENST00000580019 PRR20CP86479 221 aa8.69□□□□□ -1.02
KPNB1-208ENST00000580019 PRR20DP86480 221 aa8.69□□□□□ -1.02
KPNB1-208ENST00000580019 PRR20BP86481 221 aa8.69□□□□□ -1.02
KPNB1-208ENST00000580019 PRR20AP86496 221 aa8.69□□□□□ -1.02
KPNB1-208ENST00000580019 SAMD7Q7Z3H4 446 aa8.69□□□□□ -1.02
KPNB1-208ENST00000580019 SLC19A1P41440 591 aa8.68□□□□□ -1.02
KPNB1-208ENST00000580019 FAM187AA6NFU0 413 aa8.67□□□□□ -1.02
KPNB1-208ENST00000580019 WIPF1O43516 503 aa8.66□□□□□ -1.02
KPNB1-208ENST00000580019 HS6ST3Q8IZP7 471 aa8.66□□□□□ -1.02
KPNB1-208ENST00000580019 DDX27Q96GQ7 796 aaKnown RBP8.66□□□□□ -1.02
KPNB1-208ENST00000580019 RYDENQ9NUL5 291 aaKnown RBP8.65□□□□□ -1.02
KPNB1-208ENST00000580019 LARP6Q9BRS8 491 aaKnown RBP8.64□□□□□ -1.03
KPNB1-208ENST00000580019 EMILIN3Q9NT22 766 aa8.64□□□□□ -1.03
KPNB1-208ENST00000580019 TSKSQ9UJT2 592 aa8.64□□□□□ -1.03
KPNB1-208ENST00000580019 PKD2Q13563 968 aa8.63□□□□□ -1.03
KPNB1-208ENST00000580019 SPRYD7Q5W111 196 aa8.63□□□□□ -1.03
KPNB1-208ENST00000580019 ZNF598Q86UK7 904 aaKnown RBP8.63□□□□□ -1.03
KPNB1-208ENST00000580019 AAASQ9NRG9 546 aa8.63□□□□□ -1.03
KPNB1-208ENST00000580019 ST8SIA5O15466 376 aa8.62□□□□□ -1.03
KPNB1-208ENST00000580019 APLP1P51693 650 aa8.62□□□□□ -1.03
KPNB1-208ENST00000580019 RBM33Q96EV2 1170 aaKnown RBP8.62□□□□□ -1.03
KPNB1-208ENST00000580019 COPS2P61201 443 aa8.59□□□□□ -1.03
KPNB1-208ENST00000580019 MFSD10Q14728 455 aa8.59□□□□□ -1.03
KPNB1-208ENST00000580019 EMID1Q96A84 441 aaPredicted RBP8.59□□□□□ -1.03
KPNB1-208ENST00000580019 RNF223E7ERA6 249 aa8.58□□□□□ -1.04
KPNB1-208ENST00000580019 SMAPO00193 183 aa8.58□□□□□ -1.04
KPNB1-208ENST00000580019 RNF40O75150 1001 aa8.58□□□□□ -1.04
KPNB1-208ENST00000580019 NFX1Q12986 1120 aaKnown RBP8.58□□□□□ -1.04
KPNB1-208ENST00000580019 NECTIN2Q92692 538 aa8.58□□□□□ -1.04
KPNB1-208ENST00000580019 HDGFP51858 240 aaKnown RBP8.57□□□□□ -1.04
KPNB1-208ENST00000580019 ZNF697Q5TEC3 545 aa8.57□□□□□ -1.04
KPNB1-208ENST00000580019 TNFRSF10AO00220 468 aa8.56□□□□□ -1.04
KPNB1-208ENST00000580019 GDF9O60383 454 aa8.56□□□□□ -1.04
KPNB1-208ENST00000580019 ZPR1O75312 459 aa8.56□□□□□ -1.04
KPNB1-208ENST00000580019 NBPF26B4DH59 902 aa8.53□□□□□ -1.04
KPNB1-208ENST00000580019 C11orf95C9JLR9 678 aaPredicted RBP8.53□□□□□ -1.04
KPNB1-208ENST00000580019 CRIPAKQ8N1N5 446 aa8.53□□□□□ -1.04
KPNB1-208ENST00000580019 FAM181BA6NEQ2 426 aa8.52□□□□□ -1.05
KPNB1-208ENST00000580019 ANKLE1Q8NAG6 615 aa8.52□□□□□ -1.05
KPNB1-208ENST00000580019 TATDN2Q93075 761 aa8.52□□□□□ -1.05
KPNB1-208ENST00000580019 CDCA7LQ96GN5 454 aa8.52□□□□□ -1.05
KPNB1-208ENST00000580019 PRSS12P56730 875 aa8.51□□□□□ -1.05
KPNB1-208ENST00000580019 EN1Q05925 392 aaPredicted RBP8.51□□□□□ -1.05
KPNB1-208ENST00000580019 NKX1-1Q15270 411 aaPredicted RBP8.51□□□□□ -1.05
KPNB1-208ENST00000580019 DNAJC5Q9H3Z4 198 aa8.51□□□□□ -1.05
KPNB1-208ENST00000580019 GMPR2Q9P2T1 348 aaKnown RBP8.51□□□□□ -1.05
KPNB1-208ENST00000580019 PNMA3Q9UL41 463 aa8.51□□□□□ -1.05
KPNB1-208ENST00000580019 MAP3K7O43318 606 aa8.5□□□□□ -1.05
KPNB1-208ENST00000580019 TSR1Q2NL82 804 aaKnown RBP8.5□□□□□ -1.05
KPNB1-208ENST00000580019 LIAT1Q6ZQX7 453 aa8.5□□□□□ -1.05
KPNB1-208ENST00000580019 CHGAP10645 457 aaKnown RBP8.49□□□□□ -1.05
KPNB1-208ENST00000580019 DDX12PQ92771 950 aa8.49□□□□□ -1.05
KPNB1-208ENST00000580019 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
KPNB1-208ENST00000580019 DACH1Q9UI36 760 aa8.49□□□□□ -1.05
KPNB1-208ENST00000580019 SUZ12Q15022 739 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms