RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 CRISPLD2Q9H0B8 497 aa11.47□□□□□ -0.57
FOXN3-217ENST00000557572 ZNF775Q96BV0 537 aaPredicted RBP11.46□□□□□ -0.57
FOXN3-217ENST00000557572 PKD2Q13563 968 aa11.45□□□□□ -0.58
FOXN3-217ENST00000557572 SEPT9Q9UHD8 586 aaPredicted RBP11.45□□□□□ -0.58
FOXN3-217ENST00000557572 MAP3K9P80192 1104 aa11.43□□□□□ -0.58
FOXN3-217ENST00000557572 TSR3Q9UJK0 312 aaKnown RBP11.43□□□□□ -0.58
FOXN3-217ENST00000557572 HPS5Q9UPZ3 1129 aa11.43□□□□□ -0.58
FOXN3-217ENST00000557572 PCDHGA10Q9Y5H3 936 aa11.43□□□□□ -0.58
FOXN3-217ENST00000557572 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.41□□□□□ -0.58
FOXN3-217ENST00000557572 PDE4AP27815 886 aa11.39□□□□□ -0.59
FOXN3-217ENST00000557572 LRCH3Q96II8 777 aa11.39□□□□□ -0.59
FOXN3-217ENST00000557572 TYW1BQ6NUM6 668 aa11.37□□□□□ -0.59
FOXN3-217ENST00000557572 ONECUT3O60422 494 aaPredicted RBP11.36□□□□□ -0.59
FOXN3-217ENST00000557572 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
FOXN3-217ENST00000557572 FBXW7Q969H0 707 aa11.36□□□□□ -0.59
FOXN3-217ENST00000557572 PDZRN3Q9UPQ7 1066 aa11.36□□□□□ -0.59
FOXN3-217ENST00000557572 V9GY48 417 aaPredicted RBP11.36□□□□□ -0.59
FOXN3-217ENST00000557572 HS6ST3Q8IZP7 471 aa11.35□□□□□ -0.59
FOXN3-217ENST00000557572 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
FOXN3-217ENST00000557572 PPP1R18Q6NYC8 613 aa11.34□□□□□ -0.59
FOXN3-217ENST00000557572 PPP4CP60510 307 aa11.32□□□□□ -0.6
FOXN3-217ENST00000557572 TRIM6-TRIM34B2RNG4 842 aa11.31□□□□□ -0.6
FOXN3-217ENST00000557572 PHF14O94880 888 aa11.31□□□□□ -0.6
FOXN3-217ENST00000557572 TJAP1Q5JTD0 557 aa11.31□□□□□ -0.6
FOXN3-217ENST00000557572 LARP6Q9BRS8 491 aaKnown RBP11.3□□□□□ -0.6
FOXN3-217ENST00000557572 C6orf132Q5T0Z8 1188 aa11.29□□□□□ -0.6
FOXN3-217ENST00000557572 DDX27Q96GQ7 796 aaKnown RBP11.28□□□□□ -0.6
FOXN3-217ENST00000557572 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.27□□□□□ -0.61
FOXN3-217ENST00000557572 CHGAP10645 457 aaKnown RBP11.26□□□□□ -0.61
FOXN3-217ENST00000557572 MTRQ99707 1265 aa11.26□□□□□ -0.61
FOXN3-217ENST00000557572 IL21Q9HBE4 155 aa11.25□□□□□ -0.61
FOXN3-217ENST00000557572 EMILIN3Q9NT22 766 aa11.25□□□□□ -0.61
FOXN3-217ENST00000557572 RYDENQ9NUL5 291 aaKnown RBP11.25□□□□□ -0.61
FOXN3-217ENST00000557572 NKX1-1Q15270 411 aaPredicted RBP11.22□□□□□ -0.61
FOXN3-217ENST00000557572 RBM33Q96EV2 1170 aaKnown RBP11.21□□□□□ -0.61
FOXN3-217ENST00000557572 EPAS1Q99814 870 aa11.21□□□□□ -0.61
FOXN3-217ENST00000557572 ZNF516Q92618 1163 aa11.2□□□□□ -0.62
FOXN3-217ENST00000557572 PACS2Q86VP3 889 aa11.19□□□□□ -0.62
FOXN3-217ENST00000557572 SAMD7Q7Z3H4 446 aa11.18□□□□□ -0.62
FOXN3-217ENST00000557572 POTECB2RU33 542 aa11.15□□□□□ -0.62
FOXN3-217ENST00000557572 MFSD10Q14728 455 aa11.15□□□□□ -0.62
FOXN3-217ENST00000557572 NKX2-3Q8TAU0 364 aa11.15□□□□□ -0.62
FOXN3-217ENST00000557572 TSKSQ9UJT2 592 aa11.15□□□□□ -0.62
FOXN3-217ENST00000557572 GGCXP38435 758 aa11.14□□□□□ -0.63
FOXN3-217ENST00000557572 PKDCCQ504Y2 493 aa11.14□□□□□ -0.63
FOXN3-217ENST00000557572 SMAPO00193 183 aa11.13□□□□□ -0.63
FOXN3-217ENST00000557572 MYT1Q01538 1121 aa11.11□□□□□ -0.63
FOXN3-217ENST00000557572 DNAJC5Q9H3Z4 198 aa11.1□□□□□ -0.63
FOXN3-217ENST00000557572 RNF40O75150 1001 aa11.09□□□□□ -0.63
FOXN3-217ENST00000557572 TREML4Q6UXN2 200 aa11.09□□□□□ -0.63
FOXN3-217ENST00000557572 DDX12PQ92771 950 aa11.08□□□□□ -0.64
FOXN3-217ENST00000557572 DGAT1O75907 488 aa11.07□□□□□ -0.64
FOXN3-217ENST00000557572 TRIM67Q6ZTA4 783 aa11.07□□□□□ -0.64
FOXN3-217ENST00000557572 APLP1P51693 650 aa11.05□□□□□ -0.64
FOXN3-217ENST00000557572 TSR1Q2NL82 804 aaKnown RBP11.05□□□□□ -0.64
FOXN3-217ENST00000557572 TMUB1Q9BVT8 246 aa11.05□□□□□ -0.64
FOXN3-217ENST00000557572 DPYSL4O14531 572 aa11.04□□□□□ -0.64
FOXN3-217ENST00000557572 COPS2P61201 443 aa11.04□□□□□ -0.64
FOXN3-217ENST00000557572 MAP3K7O43318 606 aa11.03□□□□□ -0.64
FOXN3-217ENST00000557572 SLC19A1P41440 591 aa11.03□□□□□ -0.64
FOXN3-217ENST00000557572 HDGFP51858 240 aaKnown RBP11.03□□□□□ -0.64
FOXN3-217ENST00000557572 CDCA7LQ96GN5 454 aa11.02□□□□□ -0.65
FOXN3-217ENST00000557572 LCE2AQ5TA79 106 aaPredicted RBP11.01□□□□□ -0.65
FOXN3-217ENST00000557572 EN1Q05925 392 aaPredicted RBP11□□□□□ -0.65
FOXN3-217ENST00000557572 NBR1Q14596 966 aa11□□□□□ -0.65
FOXN3-217ENST00000557572 TATDN2Q93075 761 aa11□□□□□ -0.65
FOXN3-217ENST00000557572 PNMA3Q9UL41 463 aa11□□□□□ -0.65
FOXN3-217ENST00000557572 FAM187AA6NFU0 413 aa10.99□□□□□ -0.65
FOXN3-217ENST00000557572 FAM198AQ9UFP1 575 aa10.99□□□□□ -0.65
FOXN3-217ENST00000557572 C3orf80F5H4A9 247 aa10.98□□□□□ -0.65
FOXN3-217ENST00000557572 GTPBP6O43824 516 aaPredicted RBP10.98□□□□□ -0.65
FOXN3-217ENST00000557572 PRSS12P56730 875 aa10.98□□□□□ -0.65
FOXN3-217ENST00000557572 NBPF26B4DH59 902 aa10.96□□□□□ -0.65
FOXN3-217ENST00000557572 SPRYD7Q5W111 196 aa10.96□□□□□ -0.65
FOXN3-217ENST00000557572 PRR20EP86478 221 aa10.95□□□□□ -0.66
FOXN3-217ENST00000557572 PRR20CP86479 221 aa10.95□□□□□ -0.66
FOXN3-217ENST00000557572 PRR20DP86480 221 aa10.95□□□□□ -0.66
FOXN3-217ENST00000557572 PRR20BP86481 221 aa10.95□□□□□ -0.66
FOXN3-217ENST00000557572 PRR20AP86496 221 aa10.95□□□□□ -0.66
FOXN3-217ENST00000557572 ZNF598Q86UK7 904 aaKnown RBP10.95□□□□□ -0.66
FOXN3-217ENST00000557572 RNF223E7ERA6 249 aa10.94□□□□□ -0.66
FOXN3-217ENST00000557572 ZPR1O75312 459 aa10.94□□□□□ -0.66
FOXN3-217ENST00000557572 EMID1Q96A84 441 aaPredicted RBP10.94□□□□□ -0.66
FOXN3-217ENST00000557572 ST8SIA5O15466 376 aa10.93□□□□□ -0.66
FOXN3-217ENST00000557572 NUDT18Q6ZVK8 323 aa10.92□□□□□ -0.66
FOXN3-217ENST00000557572 NECTIN2Q92692 538 aa10.92□□□□□ -0.66
FOXN3-217ENST00000557572 STK17AQ9UEE5 414 aa10.92□□□□□ -0.66
FOXN3-217ENST00000557572 TNFRSF10AO00220 468 aa10.91□□□□□ -0.66
FOXN3-217ENST00000557572 CAMK2BQ13554 666 aa10.91□□□□□ -0.66
FOXN3-217ENST00000557572 AAASQ9NRG9 546 aa10.91□□□□□ -0.66
FOXN3-217ENST00000557572 WFS1O76024 890 aa10.9□□□□□ -0.66
FOXN3-217ENST00000557572 CADPS2Q86UW7 1296 aa10.9□□□□□ -0.66
FOXN3-217ENST00000557572 ZNF697Q5TEC3 545 aa10.89□□□□□ -0.67
FOXN3-217ENST00000557572 CERKQ8TCT0 537 aa10.89□□□□□ -0.67
FOXN3-217ENST00000557572 PPEF1O14829 653 aaPredicted RBP10.86□□□□□ -0.67
FOXN3-217ENST00000557572 GDF9O60383 454 aa10.86□□□□□ -0.67
FOXN3-217ENST00000557572 SWT1Q5T5J6 900 aaKnown RBP10.86□□□□□ -0.67
FOXN3-217ENST00000557572 SLF2Q8IX21 1173 aa10.86□□□□□ -0.67
FOXN3-217ENST00000557572 LIAT1Q6ZQX7 453 aa10.85□□□□□ -0.67
FOXN3-217ENST00000557572 PCDHB3Q9Y5E6 796 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms