RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 GFRA3O60609 400 aa11.18□□□□□ -0.62
SNRPF-202ENST00000549580 CHGAP10645 457 aaKnown RBP11.17□□□□□ -0.62
SNRPF-202ENST00000549580 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
SNRPF-202ENST00000549580 KIAA1468Q9P260 1216 aa11.16□□□□□ -0.62
SNRPF-202ENST00000549580 DNAJC5Q9H3Z4 198 aa11.15□□□□□ -0.62
SNRPF-202ENST00000549580 ONECUT3O60422 494 aaPredicted RBP11.14□□□□□ -0.63
SNRPF-202ENST00000549580 PDE4AP27815 886 aa11.14□□□□□ -0.63
SNRPF-202ENST00000549580 SEPT9Q9UHD8 586 aaPredicted RBP11.12□□□□□ -0.63
SNRPF-202ENST00000549580 NRG2O14511 850 aaPredicted RBP11.11□□□□□ -0.63
SNRPF-202ENST00000549580 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
SNRPF-202ENST00000549580 TYW1BQ6NUM6 668 aa11.1□□□□□ -0.63
SNRPF-202ENST00000549580 FBXW7Q969H0 707 aa11.1□□□□□ -0.63
SNRPF-202ENST00000549580 EMILIN3Q9NT22 766 aa11.1□□□□□ -0.63
SNRPF-202ENST00000549580 TSR3Q9UJK0 312 aaKnown RBP11.1□□□□□ -0.63
SNRPF-202ENST00000549580 PHF14O94880 888 aa11.09□□□□□ -0.63
SNRPF-202ENST00000549580 MFSD10Q14728 455 aa11.07□□□□□ -0.64
SNRPF-202ENST00000549580 FAM98CQ17RN3 349 aaKnown RBP11.07□□□□□ -0.64
SNRPF-202ENST00000549580 DDX27Q96GQ7 796 aaKnown RBP11.07□□□□□ -0.64
SNRPF-202ENST00000549580 RYDENQ9NUL5 291 aaKnown RBP11.07□□□□□ -0.64
SNRPF-202ENST00000549580 HPS5Q9UPZ3 1129 aa11.07□□□□□ -0.64
SNRPF-202ENST00000549580 PRKD2Q9BZL6 878 aa11.06□□□□□ -0.64
SNRPF-202ENST00000549580 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.06□□□□□ -0.64
SNRPF-202ENST00000549580 TRIM6-TRIM34B2RNG4 842 aa11.05□□□□□ -0.64
SNRPF-202ENST00000549580 LRCH3Q96II8 777 aa11.05□□□□□ -0.64
SNRPF-202ENST00000549580 LARP6Q9BRS8 491 aaKnown RBP11.05□□□□□ -0.64
SNRPF-202ENST00000549580 TJAP1Q5JTD0 557 aa11.02□□□□□ -0.65
SNRPF-202ENST00000549580 C6orf132Q5T0Z8 1188 aa11.02□□□□□ -0.65
SNRPF-202ENST00000549580 ZNF787Q6DD87 383 aa11□□□□□ -0.65
SNRPF-202ENST00000549580 V9GY48 417 aaPredicted RBP11□□□□□ -0.65
SNRPF-202ENST00000549580 ZNF775Q96BV0 537 aaPredicted RBP10.98□□□□□ -0.65
SNRPF-202ENST00000549580 PPP1R18Q6NYC8 613 aa10.97□□□□□ -0.65
SNRPF-202ENST00000549580 EPAS1Q99814 870 aa10.97□□□□□ -0.65
SNRPF-202ENST00000549580 PPP4CP60510 307 aa10.93□□□□□ -0.66
SNRPF-202ENST00000549580 MTRQ99707 1265 aa10.93□□□□□ -0.66
SNRPF-202ENST00000549580 TSKSQ9UJT2 592 aa10.93□□□□□ -0.66
SNRPF-202ENST00000549580 GTPBP6O43824 516 aaPredicted RBP10.92□□□□□ -0.66
SNRPF-202ENST00000549580 IL21Q9HBE4 155 aa10.91□□□□□ -0.66
SNRPF-202ENST00000549580 PDZRN3Q9UPQ7 1066 aa10.91□□□□□ -0.66
SNRPF-202ENST00000549580 RBM33Q96EV2 1170 aaKnown RBP10.89□□□□□ -0.67
SNRPF-202ENST00000549580 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.89□□□□□ -0.67
SNRPF-202ENST00000549580 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
SNRPF-202ENST00000549580 CAMK2BQ13554 666 aa10.86□□□□□ -0.67
SNRPF-202ENST00000549580 PACS2Q86VP3 889 aa10.86□□□□□ -0.67
SNRPF-202ENST00000549580 ZNF516Q92618 1163 aa10.86□□□□□ -0.67
SNRPF-202ENST00000549580 CADPS2Q86UW7 1296 aa10.84□□□□□ -0.67
SNRPF-202ENST00000549580 TSR1Q2NL82 804 aaKnown RBP10.83□□□□□ -0.68
SNRPF-202ENST00000549580 DPYSL4O14531 572 aa10.82□□□□□ -0.68
SNRPF-202ENST00000549580 EN1Q05925 392 aaPredicted RBP10.82□□□□□ -0.68
SNRPF-202ENST00000549580 SMAPO00193 183 aa10.81□□□□□ -0.68
SNRPF-202ENST00000549580 NKX2-3Q8TAU0 364 aa10.81□□□□□ -0.68
SNRPF-202ENST00000549580 DDX12PQ92771 950 aa10.81□□□□□ -0.68
SNRPF-202ENST00000549580 FAM198AQ9UFP1 575 aa10.81□□□□□ -0.68
SNRPF-202ENST00000549580 C3orf80F5H4A9 247 aa10.8□□□□□ -0.68
SNRPF-202ENST00000549580 TRIM67Q6ZTA4 783 aa10.8□□□□□ -0.68
SNRPF-202ENST00000549580 APLP1P51693 650 aa10.79□□□□□ -0.68
SNRPF-202ENST00000549580 CDCA7LQ96GN5 454 aa10.77□□□□□ -0.69
SNRPF-202ENST00000549580 MAP3K7O43318 606 aa10.75□□□□□ -0.69
SNRPF-202ENST00000549580 NBR1Q14596 966 aa10.75□□□□□ -0.69
SNRPF-202ENST00000549580 POTECB2RU33 542 aa10.74□□□□□ -0.69
SNRPF-202ENST00000549580 PRSS12P56730 875 aa10.74□□□□□ -0.69
SNRPF-202ENST00000549580 MYT1Q01538 1121 aa10.74□□□□□ -0.69
SNRPF-202ENST00000549580 AMER1Q5JTC6 1135 aaPredicted RBP10.73□□□□□ -0.69
SNRPF-202ENST00000549580 LCE2AQ5TA79 106 aaPredicted RBP10.73□□□□□ -0.69
SNRPF-202ENST00000549580 TATDN2Q93075 761 aa10.73□□□□□ -0.69
SNRPF-202ENST00000549580 TMUB1Q9BVT8 246 aa10.73□□□□□ -0.69
SNRPF-202ENST00000549580 DCAF8L2P0C7V8 631 aa10.72□□□□□ -0.69
SNRPF-202ENST00000549580 GGCXP38435 758 aa10.72□□□□□ -0.69
SNRPF-202ENST00000549580 EMID1Q96A84 441 aaPredicted RBP10.72□□□□□ -0.69
SNRPF-202ENST00000549580 RTN4Q9NQC3 1192 aaKnown RBP10.72□□□□□ -0.69
SNRPF-202ENST00000549580 NBPF26B4DH59 902 aa10.71□□□□□ -0.69
SNRPF-202ENST00000549580 PNMA3Q9UL41 463 aa10.7□□□□□ -0.7
SNRPF-202ENST00000549580 RNF40O75150 1001 aa10.68□□□□□ -0.7
SNRPF-202ENST00000549580 DGAT1O75907 488 aa10.68□□□□□ -0.7
SNRPF-202ENST00000549580 PRIM1P49642 420 aaKnown RBP10.68□□□□□ -0.7
SNRPF-202ENST00000549580 PDIA6Q15084 440 aa10.68□□□□□ -0.7
SNRPF-202ENST00000549580 PKDCCQ504Y2 493 aa10.68□□□□□ -0.7
SNRPF-202ENST00000549580 COPS2P61201 443 aa10.67□□□□□ -0.7
SNRPF-202ENST00000549580 CERKQ8TCT0 537 aa10.67□□□□□ -0.7
SNRPF-202ENST00000549580 PRR20EP86478 221 aa10.66□□□□□ -0.7
SNRPF-202ENST00000549580 PRR20CP86479 221 aa10.66□□□□□ -0.7
SNRPF-202ENST00000549580 PRR20DP86480 221 aa10.66□□□□□ -0.7
SNRPF-202ENST00000549580 PRR20BP86481 221 aa10.66□□□□□ -0.7
SNRPF-202ENST00000549580 PRR20AP86496 221 aa10.66□□□□□ -0.7
SNRPF-202ENST00000549580 SLC19A1P41440 591 aa10.65□□□□□ -0.7
SNRPF-202ENST00000549580 TREML4Q6UXN2 200 aa10.65□□□□□ -0.7
SNRPF-202ENST00000549580 ZPR1O75312 459 aa10.64□□□□□ -0.71
SNRPF-202ENST00000549580 NUDT18Q6ZVK8 323 aa10.64□□□□□ -0.71
SNRPF-202ENST00000549580 RNF223E7ERA6 249 aa10.63□□□□□ -0.71
SNRPF-202ENST00000549580 SPRYD7Q5W111 196 aa10.63□□□□□ -0.71
SNRPF-202ENST00000549580 NECTIN2Q92692 538 aa10.62□□□□□ -0.71
SNRPF-202ENST00000549580 ZNF598Q86UK7 904 aaKnown RBP10.61□□□□□ -0.71
SNRPF-202ENST00000549580 RBM27Q9P2N5 1060 aaKnown RBP10.61□□□□□ -0.71
SNRPF-202ENST00000549580 HDGFP51858 240 aaKnown RBP10.6□□□□□ -0.71
SNRPF-202ENST00000549580 SWT1Q5T5J6 900 aaKnown RBP10.59□□□□□ -0.71
SNRPF-202ENST00000549580 CDHR5Q9HBB8 845 aa10.58□□□□□ -0.72
SNRPF-202ENST00000549580 SPDYE16A6NNV3 312 aaPredicted RBP10.57□□□□□ -0.72
SNRPF-202ENST00000549580 SLF2Q8IX21 1173 aa10.57□□□□□ -0.72
SNRPF-202ENST00000549580 FAM187AA6NFU0 413 aa10.56□□□□□ -0.72
SNRPF-202ENST00000549580 GDF9O60383 454 aa10.56□□□□□ -0.72
SNRPF-202ENST00000549580 TTC13Q8NBP0 860 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms