RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 IFNLR1Q8IU57 520 aaPredicted RBP6.69□□□□□ -1.34
UBE4A-203ENST00000545354 PHF12Q96QT6 1004 aa6.69□□□□□ -1.34
UBE4A-203ENST00000545354 CCDC61Q9Y6R9 512 aa6.69□□□□□ -1.34
UBE4A-203ENST00000545354 KIF20AO95235 890 aa6.68□□□□□ -1.34
UBE4A-203ENST00000545354 TPM2P07951 284 aa6.68□□□□□ -1.34
UBE4A-203ENST00000545354 EXOC8Q8IYI6 725 aa6.68□□□□□ -1.34
UBE4A-203ENST00000545354 FAM177A1Q8N128 213 aaPredicted RBP6.68□□□□□ -1.34
UBE4A-203ENST00000545354 YY1AP1Q9H869 796 aa6.68□□□□□ -1.34
UBE4A-203ENST00000545354 TCERG1O14776 1098 aaKnown RBP6.67□□□□□ -1.34
UBE4A-203ENST00000545354 NRDCO43847 1150 aa6.67□□□□□ -1.34
UBE4A-203ENST00000545354 SLC20A2Q08357 652 aa6.67□□□□□ -1.34
UBE4A-203ENST00000545354 HSP90AB3PQ58FF7 597 aa6.67□□□□□ -1.34
UBE4A-203ENST00000545354 MYO15BQ96JP2 1530 aa6.67□□□□□ -1.34
UBE4A-203ENST00000545354 RAD21O60216 631 aa6.67□□□□□ -1.34
UBE4A-203ENST00000545354 RGS3P49796 1198 aa6.67□□□□□ -1.34
UBE4A-203ENST00000545354 CALRP27797 417 aaKnown RBP6.66□□□□□ -1.34
UBE4A-203ENST00000545354 RALBP1Q15311 655 aa6.65□□□□□ -1.34
UBE4A-203ENST00000545354 KCTD17Q8N5Z5 321 aa6.65□□□□□ -1.34
UBE4A-203ENST00000545354 TMEM51Q9NW97 253 aa6.65□□□□□ -1.34
UBE4A-203ENST00000545354 CUX2O14529 1486 aa6.64□□□□□ -1.35
UBE4A-203ENST00000545354 HMGB1P1B2RPK0 211 aaPredicted RBP6.64□□□□□ -1.35
UBE4A-203ENST00000545354 GALR2O43603 387 aaPredicted RBP6.64□□□□□ -1.35
UBE4A-203ENST00000545354 SSR1P43307 286 aaKnown RBP6.64□□□□□ -1.35
UBE4A-203ENST00000545354 FAM212AQ96EL1 285 aa6.64□□□□□ -1.35
UBE4A-203ENST00000545354 KIF12Q96FN5 646 aa6.64□□□□□ -1.35
UBE4A-203ENST00000545354 ZNF830Q96NB3 372 aaPredicted RBP6.64□□□□□ -1.35
UBE4A-203ENST00000545354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.64□□□□□ -1.351e-8■■■■■ 43.5
UBE4A-203ENST00000545354 GEMIN8Q9NWZ8 242 aaKnown RBP6.64□□□□□ -1.35
UBE4A-203ENST00000545354 PSEN1P49768 467 aa6.63□□□□□ -1.35
UBE4A-203ENST00000545354 NBPF9Q3BBW0 867 aa6.63□□□□□ -1.35
UBE4A-203ENST00000545354 DNTTIP2Q5QJE6 756 aaKnown RBP6.62□□□□□ -1.35
UBE4A-203ENST00000545354 DCAF8Q5TAQ9 597 aa6.62□□□□□ -1.35
UBE4A-203ENST00000545354 CARD10Q9BWT7 1032 aa6.62□□□□□ -1.35
UBE4A-203ENST00000545354 PNNQ9H307 717 aaKnown RBP6.62□□□□□ -1.35
UBE4A-203ENST00000545354 RBM28Q9NW13 759 aaKnown RBP6.62□□□□□ -1.35
UBE4A-203ENST00000545354 POTEIP0CG38 1075 aa6.62□□□□□ -1.35
UBE4A-203ENST00000545354 RBM25P49756 843 aaKnown RBP6.62□□□□□ -1.35
UBE4A-203ENST00000545354 SETDB1Q15047 1291 aa6.62□□□□□ -1.35
UBE4A-203ENST00000545354 SPOCK2Q92563 424 aa6.62□□□□□ -1.35
UBE4A-203ENST00000545354 NECTIN2Q92692 538 aa6.62□□□□□ -1.35
UBE4A-203ENST00000545354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.61□□□□□ -1.35
UBE4A-203ENST00000545354 TMTC2Q8N394 836 aa6.61□□□□□ -1.35
UBE4A-203ENST00000545354 BSDC1Q9NW68 430 aaPredicted RBP6.61□□□□□ -1.35
UBE4A-203ENST00000545354 GSE1Q14687 1217 aa6.61□□□□□ -1.35
UBE4A-203ENST00000545354 EGFL6Q8IUX8 553 aa6.61□□□□□ -1.35
UBE4A-203ENST00000545354 MS4A3Q96HJ5 214 aa6.61□□□□□ -1.35
UBE4A-203ENST00000545354 TERF2IPQ9NYB0 399 aa6.61□□□□□ -1.35
UBE4A-203ENST00000545354 MAP3K13O43283 966 aa6.6□□□□□ -1.35
UBE4A-203ENST00000545354 LETM1O95202 739 aaPredicted RBP6.6□□□□□ -1.35
UBE4A-203ENST00000545354 TSHZ1Q6ZSZ6 1077 aa6.6□□□□□ -1.35
UBE4A-203ENST00000545354 GTPBP4Q9BZE4 634 aaKnown RBP6.6□□□□□ -1.35
UBE4A-203ENST00000545354 TSPYL1Q9H0U9 437 aa6.6□□□□□ -1.35
UBE4A-203ENST00000545354 OTUD6BQ8N6M0 293 aa6.59□□□□□ -1.35
UBE4A-203ENST00000545354 DCBLD2Q96PD2 775 aa6.59□□□□□ -1.35
UBE4A-203ENST00000545354 GOLIM4O00461 696 aa6.59□□□□□ -1.35
UBE4A-203ENST00000545354 ANP32CO43423 234 aa6.59□□□□□ -1.35
UBE4A-203ENST00000545354 SGIP1Q9BQI5 828 aa6.59□□□□□ -1.35
UBE4A-203ENST00000545354 E9PSI1 815 aa6.58□□□□□ -1.36
UBE4A-203ENST00000545354 HDAC1Q13547 482 aaPredicted RBP6.58□□□□□ -1.36
UBE4A-203ENST00000545354 PPP4R3BQ5MIZ7 849 aa6.58□□□□□ -1.36
UBE4A-203ENST00000545354 RAI14Q9P0K7 980 aa6.58□□□□□ -1.36
UBE4A-203ENST00000545354 TERF1P54274 439 aa6.58□□□□□ -1.36
UBE4A-203ENST00000545354 FAM50AQ14320 339 aaKnown RBP6.58□□□□□ -1.36
UBE4A-203ENST00000545354 SCRIBQ14160 1630 aa6.57□□□□□ -1.36
UBE4A-203ENST00000545354 SPTY2D1Q68D10 685 aaPredicted RBP6.57□□□□□ -1.36
UBE4A-203ENST00000545354 RINLQ6ZS11 566 aa6.57□□□□□ -1.36
UBE4A-203ENST00000545354 FEZ2Q9UHY8 353 aaPredicted RBP6.57□□□□□ -1.36
UBE4A-203ENST00000545354 CLCN1P35523 988 aa6.56□□□□□ -1.36
UBE4A-203ENST00000545354 DMTNQ08495 405 aa6.56□□□□□ -1.36
UBE4A-203ENST00000545354 SH3BP1Q9Y3L3 701 aa6.56□□□□□ -1.36
UBE4A-203ENST00000545354 ERCC3P19447 782 aa6.56□□□□□ -1.36
UBE4A-203ENST00000545354 ZKSCAN8Q15776 578 aaPredicted RBP6.56□□□□□ -1.36
UBE4A-203ENST00000545354 NBPF6Q5VWK0 638 aa6.56□□□□□ -1.36
UBE4A-203ENST00000545354 NBPF5PQ86XG9 351 aaPredicted RBP6.56□□□□□ -1.36
UBE4A-203ENST00000545354 DDRGK1Q96HY6 314 aa6.56□□□□□ -1.36
UBE4A-203ENST00000545354 NBPF4Q96M43 638 aa6.56□□□□□ -1.36
UBE4A-203ENST00000545354 IPO9Q96P70 1041 aaKnown RBP6.56□□□□□ -1.36
UBE4A-203ENST00000545354 PYGBP11216 843 aa6.55□□□□□ -1.36
UBE4A-203ENST00000545354 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.55□□□□□ -1.36
UBE4A-203ENST00000545354 MKL1Q969V6 931 aa6.55□□□□□ -1.36
UBE4A-203ENST00000545354 MTMR7Q9Y216 660 aa6.55□□□□□ -1.36
UBE4A-203ENST00000545354 PCDHB13Q9Y5F0 798 aa6.55□□□□□ -1.36
UBE4A-203ENST00000545354 ERCC6Q03468 1493 aa6.55□□□□□ -1.36
UBE4A-203ENST00000545354 KDM4AO75164 1064 aa6.55□□□□□ -1.36
UBE4A-203ENST00000545354 MYH16Q9H6N6 1097 aa6.55□□□□□ -1.36
UBE4A-203ENST00000545354 TRPC6Q9Y210 931 aa6.55□□□□□ -1.36
UBE4A-203ENST00000545354 L1TD1Q5T7N2 865 aaKnown RBP6.54□□□□□ -1.36
UBE4A-203ENST00000545354 ASTLQ6HA08 431 aaPredicted RBP6.54□□□□□ -1.36
UBE4A-203ENST00000545354 CCDC125Q86Z20 511 aa6.54□□□□□ -1.36
UBE4A-203ENST00000545354 NUB1Q9Y5A7 615 aa6.54□□□□□ -1.36
UBE4A-203ENST00000545354 LOC102724159A0A0B4J2E5 919 aa6.53□□□□□ -1.36
UBE4A-203ENST00000545354 MAP2K1Q02750 393 aaPredicted RBP6.53□□□□□ -1.36
UBE4A-203ENST00000545354 PWP2Q15269 919 aaKnown RBP6.53□□□□□ -1.36
UBE4A-203ENST00000545354 NBPF10Q6P3W6 841 aaKnown RBP6.53□□□□□ -1.36
UBE4A-203ENST00000545354 IFNL1Q8IU54 200 aa6.53□□□□□ -1.36
UBE4A-203ENST00000545354 SATB1Q01826 763 aa6.53□□□□□ -1.36
UBE4A-203ENST00000545354 FAM9BQ8IZU0 186 aa6.53□□□□□ -1.36
UBE4A-203ENST00000545354 CIZ1Q9ULV3 898 aaPredicted RBP6.53□□□□□ -1.36
UBE4A-203ENST00000545354 ATMINO43313 823 aaPredicted RBP6.52□□□□□ -1.37
UBE4A-203ENST00000545354 ARID4AP29374 1257 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms