RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 SMARCA2P51531 1590 aa11.62□□□□□ -0.55
SOX6-216ENST00000533658 SMARCA4P51532 1647 aa11.6□□□□□ -0.55
SOX6-216ENST00000533658 RGL2O15211 777 aa11.6□□□□□ -0.55
SOX6-216ENST00000533658 ZNF787Q6DD87 383 aa11.6□□□□□ -0.55
SOX6-216ENST00000533658 ANKK1Q8NFD2 765 aa11.59□□□□□ -0.55
SOX6-216ENST00000533658 ZNF775Q96BV0 537 aaPredicted RBP11.59□□□□□ -0.55
SOX6-216ENST00000533658 JPH4Q96JJ6 628 aa11.59□□□□□ -0.55
SOX6-216ENST00000533658 THOC2Q8NI27 1593 aaKnown RBP11.58□□□□□ -0.55
SOX6-216ENST00000533658 ADAM33Q9BZ11 813 aa11.57□□□□□ -0.56
SOX6-216ENST00000533658 ZDHHC16Q969W1 377 aa11.56□□□□□ -0.56
SOX6-216ENST00000533658 BAZ1BQ9UIG0 1483 aaKnown RBP11.56□□□□□ -0.56
SOX6-216ENST00000533658 BCAMP50895 628 aa11.54□□□□□ -0.56
SOX6-216ENST00000533658 KCNC4Q03721 635 aa11.53□□□□□ -0.56
SOX6-216ENST00000533658 NYAP1Q6ZVC0 841 aa11.53□□□□□ -0.56
SOX6-216ENST00000533658 ANO8Q9HCE9 1232 aaPredicted RBP11.53□□□□□ -0.56
SOX6-216ENST00000533658 RABGEF1Q9UJ41 708 aa11.52□□□□□ -0.57
SOX6-216ENST00000533658 BAZ1AQ9NRL2 1556 aaPredicted RBP11.51□□□□□ -0.57
SOX6-216ENST00000533658 PEG3Q9GZU2 1588 aa11.5□□□□□ -0.57
SOX6-216ENST00000533658 LAMC3Q9Y6N6 1575 aa11.5□□□□□ -0.57
SOX6-216ENST00000533658 SOWAHBA6NEL2 793 aa11.5□□□□□ -0.57
SOX6-216ENST00000533658 PPP1R3GB7ZBB8 358 aa11.5□□□□□ -0.57
SOX6-216ENST00000533658 NRG2O14511 850 aaPredicted RBP11.49□□□□□ -0.57
SOX6-216ENST00000533658 PROX2Q3B8N5 592 aa11.49□□□□□ -0.57
SOX6-216ENST00000533658 PPP1R15BQ5SWA1 713 aa11.49□□□□□ -0.57
SOX6-216ENST00000533658 EVI5O60447 810 aa11.47□□□□□ -0.57
SOX6-216ENST00000533658 LAPTM4BQ86VI4 370 aa11.47□□□□□ -0.57
SOX6-216ENST00000533658 CRISPLD2Q9H0B8 497 aa11.47□□□□□ -0.57
SOX6-216ENST00000533658 PKD2Q13563 968 aa11.46□□□□□ -0.57
SOX6-216ENST00000533658 WBP1LQ9NX94 342 aa11.46□□□□□ -0.57
SOX6-216ENST00000533658 MROH2BQ7Z745 1585 aa11.45□□□□□ -0.58
SOX6-216ENST00000533658 KIF21AQ7Z4S6 1674 aa11.45□□□□□ -0.58
SOX6-216ENST00000533658 PDS5BQ9NTI5 1447 aa11.44□□□□□ -0.58
SOX6-216ENST00000533658 COL9A1P20849 921 aa11.42□□□□□ -0.58
SOX6-216ENST00000533658 ZFRQ96KR1 1074 aaKnown RBP11.42□□□□□ -0.58
SOX6-216ENST00000533658 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
SOX6-216ENST00000533658 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
SOX6-216ENST00000533658 WDR62O43379 1518 aa11.37□□□□□ -0.59
SOX6-216ENST00000533658 PRKD2Q9BZL6 878 aa11.37□□□□□ -0.59
SOX6-216ENST00000533658 KIAA1468Q9P260 1216 aa11.37□□□□□ -0.59
SOX6-216ENST00000533658 CADPSQ9ULU8 1353 aa11.37□□□□□ -0.59
SOX6-216ENST00000533658 PCDHGA10Q9Y5H3 936 aa11.36□□□□□ -0.59
SOX6-216ENST00000533658 SEPT9Q9UHD8 586 aaPredicted RBP11.35□□□□□ -0.59
SOX6-216ENST00000533658 NCKAP5LQ9HCH0 1330 aa11.34□□□□□ -0.59
SOX6-216ENST00000533658 TSR3Q9UJK0 312 aaKnown RBP11.33□□□□□ -0.6
SOX6-216ENST00000533658 HPS5Q9UPZ3 1129 aa11.32□□□□□ -0.6
SOX6-216ENST00000533658 WIZO95785 1651 aa11.31□□□□□ -0.6
SOX6-216ENST00000533658 ONECUT3O60422 494 aaPredicted RBP11.31□□□□□ -0.6
SOX6-216ENST00000533658 MAP3K9P80192 1104 aa11.31□□□□□ -0.6
SOX6-216ENST00000533658 FBXW7Q969H0 707 aa11.31□□□□□ -0.6
SOX6-216ENST00000533658 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.31□□□□□ -0.6
SOX6-216ENST00000533658 PDE4AP27815 886 aa11.3□□□□□ -0.6
SOX6-216ENST00000533658 FAM98CQ17RN3 349 aaKnown RBP11.3□□□□□ -0.6
SOX6-216ENST00000533658 TYW1BQ6NUM6 668 aa11.3□□□□□ -0.6
SOX6-216ENST00000533658 LOC100996750A0A140TA64 210 aa11.29□□□□□ -0.6
SOX6-216ENST00000533658 LRCH3Q96II8 777 aa11.29□□□□□ -0.6
SOX6-216ENST00000533658 KRTAP4-6Q9BYQ5 205 aa11.29□□□□□ -0.6
SOX6-216ENST00000533658 CEP164Q9UPV0 1460 aa11.29□□□□□ -0.6
SOX6-216ENST00000533658 PHF14O94880 888 aa11.27□□□□□ -0.61
SOX6-216ENST00000533658 FANCD2Q9BXW9 1451 aa11.26□□□□□ -0.61
SOX6-216ENST00000533658 PDZRN3Q9UPQ7 1066 aa11.26□□□□□ -0.61
SOX6-216ENST00000533658 V9GY48 417 aaPredicted RBP11.26□□□□□ -0.61
SOX6-216ENST00000533658 TRIM6-TRIM34B2RNG4 842 aa11.25□□□□□ -0.61
SOX6-216ENST00000533658 RYDENQ9NUL5 291 aaKnown RBP11.24□□□□□ -0.61
SOX6-216ENST00000533658 NKX1-1Q15270 411 aaPredicted RBP11.23□□□□□ -0.61
SOX6-216ENST00000533658 TJAP1Q5JTD0 557 aa11.23□□□□□ -0.61
SOX6-216ENST00000533658 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
SOX6-216ENST00000533658 EMILIN3Q9NT22 766 aa11.22□□□□□ -0.61
SOX6-216ENST00000533658 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
SOX6-216ENST00000533658 CFTRP13569 1480 aa11.2□□□□□ -0.62
SOX6-216ENST00000533658 C6orf132Q5T0Z8 1188 aa11.2□□□□□ -0.62
SOX6-216ENST00000533658 PPP1R18Q6NYC8 613 aa11.2□□□□□ -0.62
SOX6-216ENST00000533658 URB2Q14146 1524 aaKnown RBP11.19□□□□□ -0.62
SOX6-216ENST00000533658 RSF1Q96T23 1441 aaPredicted RBP11.19□□□□□ -0.62
SOX6-216ENST00000533658 CHGAP10645 457 aaKnown RBP11.19□□□□□ -0.62
SOX6-216ENST00000533658 POTECB2RU33 542 aa11.18□□□□□ -0.62
SOX6-216ENST00000533658 PPP4CP60510 307 aa11.18□□□□□ -0.62
SOX6-216ENST00000533658 MFSD10Q14728 455 aa11.18□□□□□ -0.62
SOX6-216ENST00000533658 TREML4Q6UXN2 200 aa11.17□□□□□ -0.62
SOX6-216ENST00000533658 EPAS1Q99814 870 aa11.16□□□□□ -0.62
SOX6-216ENST00000533658 IL21Q9HBE4 155 aa11.16□□□□□ -0.62
SOX6-216ENST00000533658 LCE2AQ5TA79 106 aaPredicted RBP11.15□□□□□ -0.62
SOX6-216ENST00000533658 MTRQ99707 1265 aa11.15□□□□□ -0.62
SOX6-216ENST00000533658 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.14□□□□□ -0.63
SOX6-216ENST00000533658 RIMBP3CA6NJZ7 1639 aa11.13□□□□□ -0.63
SOX6-216ENST00000533658 RIMBP3BA6NNM3 1639 aa11.13□□□□□ -0.63
SOX6-216ENST00000533658 RIMBP3Q9UFD9 1639 aa11.13□□□□□ -0.63
SOX6-216ENST00000533658 TOP2AP11388 1531 aaKnown RBP11.12□□□□□ -0.63
SOX6-216ENST00000533658 STK17AQ9UEE5 414 aa11.11□□□□□ -0.63
SOX6-216ENST00000533658 ARHGEF11O15085 1522 aa11.09□□□□□ -0.63
SOX6-216ENST00000533658 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
SOX6-216ENST00000533658 PACS2Q86VP3 889 aa11.09□□□□□ -0.63
SOX6-216ENST00000533658 SAMD7Q7Z3H4 446 aa11.08□□□□□ -0.64
SOX6-216ENST00000533658 RBM33Q96EV2 1170 aaKnown RBP11.08□□□□□ -0.64
SOX6-216ENST00000533658 TSKSQ9UJT2 592 aa11.08□□□□□ -0.64
SOX6-216ENST00000533658 ZNF516Q92618 1163 aa11.07□□□□□ -0.64
SOX6-216ENST00000533658 IFT140Q96RY7 1462 aa11.06□□□□□ -0.64
SOX6-216ENST00000533658 MYT1Q01538 1121 aa11.06□□□□□ -0.64
SOX6-216ENST00000533658 CCDC88BA6NC98 1476 aa11.04□□□□□ -0.64
SOX6-216ENST00000533658 AMER1Q5JTC6 1135 aaPredicted RBP11.02□□□□□ -0.65
SOX6-216ENST00000533658 TOPBP1Q92547 1522 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms