RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 ZFRQ96KR1 1074 aaKnown RBP3.94□□□□□ -1.78
RNU6-1258P-201ENST00000516911 CRISPLD2Q9H0B8 497 aa3.94□□□□□ -1.78
RNU6-1258P-201ENST00000516911 KIAA1468Q9P260 1216 aa3.94□□□□□ -1.78
RNU6-1258P-201ENST00000516911 PROX2Q3B8N5 592 aa3.93□□□□□ -1.78
RNU6-1258P-201ENST00000516911 TRAF7Q6Q0C0 670 aa3.93□□□□□ -1.78
RNU6-1258P-201ENST00000516911 LRCH3Q96II8 777 aa3.93□□□□□ -1.78
RNU6-1258P-201ENST00000516911 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.93□□□□□ -1.78
RNU6-1258P-201ENST00000516911 ONECUT3O60422 494 aaPredicted RBP3.92□□□□□ -1.78
RNU6-1258P-201ENST00000516911 PHF14O94880 888 aa3.92□□□□□ -1.78
RNU6-1258P-201ENST00000516911 HDGFP51858 240 aaKnown RBP3.92□□□□□ -1.78
RNU6-1258P-201ENST00000516911 PPP4CP60510 307 aa3.92□□□□□ -1.78
RNU6-1258P-201ENST00000516911 WBP1LQ9NX94 342 aa3.92□□□□□ -1.78
RNU6-1258P-201ENST00000516911 TSR3Q9UJK0 312 aaKnown RBP3.92□□□□□ -1.78
RNU6-1258P-201ENST00000516911 DCAF8L2P0C7V8 631 aa3.91□□□□□ -1.78
RNU6-1258P-201ENST00000516911 PACS2Q86VP3 889 aa3.91□□□□□ -1.78
RNU6-1258P-201ENST00000516911 EPAS1Q99814 870 aa3.91□□□□□ -1.78
RNU6-1258P-201ENST00000516911 HPS5Q9UPZ3 1129 aa3.91□□□□□ -1.78
RNU6-1258P-201ENST00000516911 PCDHGA10Q9Y5H3 936 aa3.91□□□□□ -1.78
RNU6-1258P-201ENST00000516911 FAM98CQ17RN3 349 aaKnown RBP3.9□□□□□ -1.79
RNU6-1258P-201ENST00000516911 C6orf132Q5T0Z8 1188 aa3.9□□□□□ -1.79
RNU6-1258P-201ENST00000516911 SEPT9Q9UHD8 586 aaPredicted RBP3.9□□□□□ -1.79
RNU6-1258P-201ENST00000516911 NCKAP5LQ9HCH0 1330 aa3.9□□□□□ -1.79
RNU6-1258P-201ENST00000516911 TRIM6-TRIM34B2RNG4 842 aa3.89□□□□□ -1.79
RNU6-1258P-201ENST00000516911 COL9A1P20849 921 aa3.89□□□□□ -1.79
RNU6-1258P-201ENST00000516911 RBM33Q96EV2 1170 aaKnown RBP3.89□□□□□ -1.79
RNU6-1258P-201ENST00000516911 GGCXP38435 758 aa3.88□□□□□ -1.79
RNU6-1258P-201ENST00000516911 NKX1-1Q15270 411 aaPredicted RBP3.88□□□□□ -1.79
RNU6-1258P-201ENST00000516911 ZNF787Q6DD87 383 aa3.88□□□□□ -1.79
RNU6-1258P-201ENST00000516911 PRKD2Q9BZL6 878 aa3.88□□□□□ -1.79
RNU6-1258P-201ENST00000516911 SLC4A3P48751 1232 aa3.87□□□□□ -1.79
RNU6-1258P-201ENST00000516911 DNAJC5Q9H3Z4 198 aa3.87□□□□□ -1.79
RNU6-1258P-201ENST00000516911 NRG2O14511 850 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1258P-201ENST00000516911 MAP3K7O43318 606 aa3.86□□□□□ -1.79
RNU6-1258P-201ENST00000516911 RNF40O75150 1001 aa3.86□□□□□ -1.79
RNU6-1258P-201ENST00000516911 NECTIN2Q92692 538 aa3.86□□□□□ -1.79
RNU6-1258P-201ENST00000516911 EMILIN3Q9NT22 766 aa3.86□□□□□ -1.79
RNU6-1258P-201ENST00000516911 MFSD10Q14728 455 aa3.85□□□□□ -1.79
RNU6-1258P-201ENST00000516911 IL21Q9HBE4 155 aa3.85□□□□□ -1.79
RNU6-1258P-201ENST00000516911 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.85□□□□□ -1.79
RNU6-1258P-201ENST00000516911 V9GY48 417 aaPredicted RBP3.85□□□□□ -1.79
RNU6-1258P-201ENST00000516911 DPYSL4O14531 572 aa3.84□□□□□ -1.79
RNU6-1258P-201ENST00000516911 GTPBP6O43824 516 aaPredicted RBP3.84□□□□□ -1.79
RNU6-1258P-201ENST00000516911 PPP1R18Q6NYC8 613 aa3.84□□□□□ -1.79
RNU6-1258P-201ENST00000516911 DDX12PQ92771 950 aa3.84□□□□□ -1.79
RNU6-1258P-201ENST00000516911 PDZRN3Q9UPQ7 1066 aa3.84□□□□□ -1.79
RNU6-1258P-201ENST00000516911 NBR1Q14596 966 aa3.83□□□□□ -1.8
RNU6-1258P-201ENST00000516911 SAMD7Q7Z3H4 446 aa3.83□□□□□ -1.8
RNU6-1258P-201ENST00000516911 CERKQ8TCT0 537 aa3.83□□□□□ -1.8
RNU6-1258P-201ENST00000516911 NBPF26B4DH59 902 aa3.82□□□□□ -1.8
RNU6-1258P-201ENST00000516911 MTRQ99707 1265 aa3.82□□□□□ -1.8
RNU6-1258P-201ENST00000516911 PNMA3Q9UL41 463 aa3.82□□□□□ -1.8
RNU6-1258P-201ENST00000516911 SMAPO00193 183 aa3.81□□□□□ -1.8
RNU6-1258P-201ENST00000516911 TJAP1Q5JTD0 557 aa3.81□□□□□ -1.8
RNU6-1258P-201ENST00000516911 CDCA7LQ96GN5 454 aa3.81□□□□□ -1.8
RNU6-1258P-201ENST00000516911 GRXCR2A6NFK2 248 aa3.8□□□□□ -1.8
RNU6-1258P-201ENST00000516911 SPDYE16A6NNV3 312 aaPredicted RBP3.8□□□□□ -1.8
RNU6-1258P-201ENST00000516911 PRSS12P56730 875 aa3.8□□□□□ -1.8
RNU6-1258P-201ENST00000516911 EN1Q05925 392 aaPredicted RBP3.8□□□□□ -1.8
RNU6-1258P-201ENST00000516911 PKDCCQ504Y2 493 aa3.8□□□□□ -1.8
RNU6-1258P-201ENST00000516911 TATDN2Q93075 761 aa3.8□□□□□ -1.8
RNU6-1258P-201ENST00000516911 TMUB1Q9BVT8 246 aa3.8□□□□□ -1.8
RNU6-1258P-201ENST00000516911 PRR14Q9BWN1 585 aa3.8□□□□□ -1.8
RNU6-1258P-201ENST00000516911 WDR70Q9NW82 654 aa3.8□□□□□ -1.8
RNU6-1258P-201ENST00000516911 TSKSQ9UJT2 592 aa3.8□□□□□ -1.8
RNU6-1258P-201ENST00000516911 COPS2P61201 443 aa3.79□□□□□ -1.8
RNU6-1258P-201ENST00000516911 TSR1Q2NL82 804 aaKnown RBP3.79□□□□□ -1.8
RNU6-1258P-201ENST00000516911 SLF2Q8IX21 1173 aa3.79□□□□□ -1.8
RNU6-1258P-201ENST00000516911 ZNF516Q92618 1163 aa3.79□□□□□ -1.8
RNU6-1258P-201ENST00000516911 ZNF775Q96BV0 537 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1258P-201ENST00000516911 SLC19A1P41440 591 aa3.78□□□□□ -1.8
RNU6-1258P-201ENST00000516911 CAMK2BQ13554 666 aa3.78□□□□□ -1.8
RNU6-1258P-201ENST00000516911 NUDT18Q6ZVK8 323 aa3.77□□□□□ -1.81
RNU6-1258P-201ENST00000516911 DGAT1O75907 488 aa3.76□□□□□ -1.81
RNU6-1258P-201ENST00000516911 APLP1P51693 650 aa3.76□□□□□ -1.81
RNU6-1258P-201ENST00000516911 CADPS2Q86UW7 1296 aa3.76□□□□□ -1.81
RNU6-1258P-201ENST00000516911 NKX2-3Q8TAU0 364 aa3.76□□□□□ -1.81
RNU6-1258P-201ENST00000516911 PCDHB3Q9Y5E6 796 aa3.76□□□□□ -1.81
RNU6-1258P-201ENST00000516911 ZPR1O75312 459 aa3.75□□□□□ -1.81
RNU6-1258P-201ENST00000516911 PDIA6Q15084 440 aa3.75□□□□□ -1.81
RNU6-1258P-201ENST00000516911 FAM187AA6NFU0 413 aa3.74□□□□□ -1.81
RNU6-1258P-201ENST00000516911 LCE2BO14633 110 aa3.74□□□□□ -1.81
RNU6-1258P-201ENST00000516911 E2F4Q16254 413 aa3.74□□□□□ -1.81
RNU6-1258P-201ENST00000516911 KMT5BQ4FZB7 885 aa3.74□□□□□ -1.81
RNU6-1258P-201ENST00000516911 SWT1Q5T5J6 900 aaKnown RBP3.74□□□□□ -1.81
RNU6-1258P-201ENST00000516911 ZNF598Q86UK7 904 aaKnown RBP3.73□□□□□ -1.81
RNU6-1258P-201ENST00000516911 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.73□□□□□ -1.81
RNU6-1258P-201ENST00000516911 RBM27Q9P2N5 1060 aaKnown RBP3.73□□□□□ -1.81
RNU6-1258P-201ENST00000516911 RSPH4AQ5TD94 716 aa3.72□□□□□ -1.81
RNU6-1258P-201ENST00000516911 ZNF697Q5TEC3 545 aa3.72□□□□□ -1.81
RNU6-1258P-201ENST00000516911 SPRYD7Q5W111 196 aa3.72□□□□□ -1.81
RNU6-1258P-201ENST00000516911 FAM198AQ9UFP1 575 aa3.72□□□□□ -1.81
RNU6-1258P-201ENST00000516911 RNF223E7ERA6 249 aa3.71□□□□□ -1.82
RNU6-1258P-201ENST00000516911 MYT1Q01538 1121 aa3.71□□□□□ -1.82
RNU6-1258P-201ENST00000516911 ANKLE1Q8NAG6 615 aa3.71□□□□□ -1.82
RNU6-1258P-201ENST00000516911 TNFRSF10AO00220 468 aa3.7□□□□□ -1.82
RNU6-1258P-201ENST00000516911 NR1I2O75469 434 aa3.7□□□□□ -1.82
RNU6-1258P-201ENST00000516911 PRR20EP86478 221 aa3.7□□□□□ -1.82
RNU6-1258P-201ENST00000516911 PRR20CP86479 221 aa3.7□□□□□ -1.82
RNU6-1258P-201ENST00000516911 PRR20DP86480 221 aa3.7□□□□□ -1.82
RNU6-1258P-201ENST00000516911 PRR20BP86481 221 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms