RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 WBP1LQ9NX94 342 aa5.74□□□□□ -1.49
RNU2-56P-201ENST00000516826 DNAJC5Q9H3Z4 198 aa5.73□□□□□ -1.49
RNU2-56P-201ENST00000516826 RYDENQ9NUL5 291 aaKnown RBP5.73□□□□□ -1.49
RNU2-56P-201ENST00000516826 COL9A1P20849 921 aa5.72□□□□□ -1.49
RNU2-56P-201ENST00000516826 PROX2Q3B8N5 592 aa5.72□□□□□ -1.49
RNU2-56P-201ENST00000516826 KIAA1468Q9P260 1216 aa5.71□□□□□ -1.5
RNU2-56P-201ENST00000516826 TSR3Q9UJK0 312 aaKnown RBP5.71□□□□□ -1.5
RNU2-56P-201ENST00000516826 PCDHGA10Q9Y5H3 936 aa5.71□□□□□ -1.5
RNU2-56P-201ENST00000516826 V9GY48 417 aaPredicted RBP5.71□□□□□ -1.5
RNU2-56P-201ENST00000516826 MAP3K9P80192 1104 aa5.7□□□□□ -1.5
RNU2-56P-201ENST00000516826 TYW1BQ6NUM6 668 aa5.7□□□□□ -1.5
RNU2-56P-201ENST00000516826 PHF14O94880 888 aa5.69□□□□□ -1.5
RNU2-56P-201ENST00000516826 FAM98CQ17RN3 349 aaKnown RBP5.69□□□□□ -1.5
RNU2-56P-201ENST00000516826 ZNF787Q6DD87 383 aa5.69□□□□□ -1.5
RNU2-56P-201ENST00000516826 NCKAP5LQ9HCH0 1330 aa5.69□□□□□ -1.5
RNU2-56P-201ENST00000516826 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.68□□□□□ -1.5
RNU2-56P-201ENST00000516826 LRCH3Q96II8 777 aa5.67□□□□□ -1.5
RNU2-56P-201ENST00000516826 PRKD2Q9BZL6 878 aa5.67□□□□□ -1.5
RNU2-56P-201ENST00000516826 TRIM6-TRIM34B2RNG4 842 aa5.66□□□□□ -1.5
RNU2-56P-201ENST00000516826 TJAP1Q5JTD0 557 aa5.66□□□□□ -1.5
RNU2-56P-201ENST00000516826 ZNF775Q96BV0 537 aaPredicted RBP5.66□□□□□ -1.5
RNU2-56P-201ENST00000516826 EPAS1Q99814 870 aa5.66□□□□□ -1.5
RNU2-56P-201ENST00000516826 HPS5Q9UPZ3 1129 aa5.66□□□□□ -1.5
RNU2-56P-201ENST00000516826 MFSD10Q14728 455 aa5.65□□□□□ -1.5
RNU2-56P-201ENST00000516826 C6orf132Q5T0Z8 1188 aa5.65□□□□□ -1.5
RNU2-56P-201ENST00000516826 DDX27Q96GQ7 796 aaKnown RBP5.65□□□□□ -1.5
RNU2-56P-201ENST00000516826 PPP4CP60510 307 aa5.63□□□□□ -1.51
RNU2-56P-201ENST00000516826 NKX1-1Q15270 411 aaPredicted RBP5.63□□□□□ -1.51
RNU2-56P-201ENST00000516826 LARP6Q9BRS8 491 aaKnown RBP5.63□□□□□ -1.51
RNU2-56P-201ENST00000516826 SEPT9Q9UHD8 586 aaPredicted RBP5.63□□□□□ -1.51
RNU2-56P-201ENST00000516826 PPP1R18Q6NYC8 613 aa5.62□□□□□ -1.51
RNU2-56P-201ENST00000516826 IL21Q9HBE4 155 aa5.62□□□□□ -1.51
RNU2-56P-201ENST00000516826 EMILIN3Q9NT22 766 aa5.62□□□□□ -1.51
RNU2-56P-201ENST00000516826 PDZRN3Q9UPQ7 1066 aa5.62□□□□□ -1.51
RNU2-56P-201ENST00000516826 CHGAP10645 457 aaKnown RBP5.61□□□□□ -1.51
RNU2-56P-201ENST00000516826 PACS2Q86VP3 889 aa5.61□□□□□ -1.51
RNU2-56P-201ENST00000516826 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.61□□□□□ -1.51
RNU2-56P-201ENST00000516826 MTRQ99707 1265 aa5.59□□□□□ -1.51
RNU2-56P-201ENST00000516826 TMUB1Q9BVT8 246 aa5.58□□□□□ -1.52
RNU2-56P-201ENST00000516826 GGCXP38435 758 aa5.56□□□□□ -1.52
RNU2-56P-201ENST00000516826 TSKSQ9UJT2 592 aa5.56□□□□□ -1.52
RNU2-56P-201ENST00000516826 DGAT1O75907 488 aa5.55□□□□□ -1.52
RNU2-56P-201ENST00000516826 CAMK2BQ13554 666 aa5.55□□□□□ -1.52
RNU2-56P-201ENST00000516826 SAMD7Q7Z3H4 446 aa5.54□□□□□ -1.52
RNU2-56P-201ENST00000516826 ZNF516Q92618 1163 aa5.54□□□□□ -1.52
RNU2-56P-201ENST00000516826 GTPBP6O43824 516 aaPredicted RBP5.53□□□□□ -1.52
RNU2-56P-201ENST00000516826 MYT1Q01538 1121 aa5.53□□□□□ -1.52
RNU2-56P-201ENST00000516826 NECTIN2Q92692 538 aa5.53□□□□□ -1.52
RNU2-56P-201ENST00000516826 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
RNU2-56P-201ENST00000516826 TREML4Q6UXN2 200 aa5.52□□□□□ -1.53
RNU2-56P-201ENST00000516826 CERKQ8TCT0 537 aa5.52□□□□□ -1.53
RNU2-56P-201ENST00000516826 RBM33Q96EV2 1170 aaKnown RBP5.52□□□□□ -1.53
RNU2-56P-201ENST00000516826 HDGFP51858 240 aaKnown RBP5.51□□□□□ -1.53
RNU2-56P-201ENST00000516826 PRSS12P56730 875 aa5.51□□□□□ -1.53
RNU2-56P-201ENST00000516826 PRR20EP86478 221 aa5.51□□□□□ -1.53
RNU2-56P-201ENST00000516826 PRR20CP86479 221 aa5.51□□□□□ -1.53
RNU2-56P-201ENST00000516826 PRR20DP86480 221 aa5.51□□□□□ -1.53
RNU2-56P-201ENST00000516826 PRR20BP86481 221 aa5.51□□□□□ -1.53
RNU2-56P-201ENST00000516826 PRR20AP86496 221 aa5.51□□□□□ -1.53
RNU2-56P-201ENST00000516826 EN1Q05925 392 aaPredicted RBP5.51□□□□□ -1.53
RNU2-56P-201ENST00000516826 PKDCCQ504Y2 493 aa5.51□□□□□ -1.53
RNU2-56P-201ENST00000516826 TRIM67Q6ZTA4 783 aa5.51□□□□□ -1.53
RNU2-56P-201ENST00000516826 NKX2-3Q8TAU0 364 aa5.5□□□□□ -1.53
RNU2-56P-201ENST00000516826 TATDN2Q93075 761 aa5.5□□□□□ -1.53
RNU2-56P-201ENST00000516826 CDCA7LQ96GN5 454 aa5.5□□□□□ -1.53
RNU2-56P-201ENST00000516826 APLP1P51693 650 aa5.49□□□□□ -1.53
RNU2-56P-201ENST00000516826 POTECB2RU33 542 aa5.48□□□□□ -1.53
RNU2-56P-201ENST00000516826 NBPF26B4DH59 902 aa5.48□□□□□ -1.53
RNU2-56P-201ENST00000516826 DPYSL4O14531 572 aa5.48□□□□□ -1.53
RNU2-56P-201ENST00000516826 SLC19A1P41440 591 aa5.48□□□□□ -1.53
RNU2-56P-201ENST00000516826 TSR1Q2NL82 804 aaKnown RBP5.48□□□□□ -1.53
RNU2-56P-201ENST00000516826 DDX12PQ92771 950 aa5.48□□□□□ -1.53
RNU2-56P-201ENST00000516826 SMAPO00193 183 aa5.47□□□□□ -1.53
RNU2-56P-201ENST00000516826 MAP3K7O43318 606 aa5.47□□□□□ -1.53
RNU2-56P-201ENST00000516826 SPRYD7Q5W111 196 aa5.47□□□□□ -1.53
RNU2-56P-201ENST00000516826 ZNF598Q86UK7 904 aaKnown RBP5.47□□□□□ -1.53
RNU2-56P-201ENST00000516826 FAM198AQ9UFP1 575 aa5.47□□□□□ -1.53
RNU2-56P-201ENST00000516826 ZPR1O75312 459 aa5.46□□□□□ -1.54
RNU2-56P-201ENST00000516826 NBR1Q14596 966 aa5.46□□□□□ -1.54
RNU2-56P-201ENST00000516826 RBM27Q9P2N5 1060 aaKnown RBP5.46□□□□□ -1.54
RNU2-56P-201ENST00000516826 EMID1Q96A84 441 aaPredicted RBP5.45□□□□□ -1.54
RNU2-56P-201ENST00000516826 STK17AQ9UEE5 414 aa5.45□□□□□ -1.54
RNU2-56P-201ENST00000516826 PNMA3Q9UL41 463 aa5.45□□□□□ -1.54
RNU2-56P-201ENST00000516826 SPDYE16A6NNV3 312 aaPredicted RBP5.44□□□□□ -1.54
RNU2-56P-201ENST00000516826 RNF223E7ERA6 249 aa5.44□□□□□ -1.54
RNU2-56P-201ENST00000516826 C3orf80F5H4A9 247 aa5.44□□□□□ -1.54
RNU2-56P-201ENST00000516826 PDIA6Q15084 440 aa5.44□□□□□ -1.54
RNU2-56P-201ENST00000516826 CADPS2Q86UW7 1296 aa5.44□□□□□ -1.54
RNU2-56P-201ENST00000516826 SLF2Q8IX21 1173 aa5.44□□□□□ -1.54
RNU2-56P-201ENST00000516826 ANKLE1Q8NAG6 615 aa5.44□□□□□ -1.54
RNU2-56P-201ENST00000516826 PRR14Q9BWN1 585 aa5.44□□□□□ -1.54
RNU2-56P-201ENST00000516826 GDF9O60383 454 aa5.43□□□□□ -1.54
RNU2-56P-201ENST00000516826 COPS2P61201 443 aa5.42□□□□□ -1.54
RNU2-56P-201ENST00000516826 NUDT18Q6ZVK8 323 aa5.42□□□□□ -1.54
RNU2-56P-201ENST00000516826 AAASQ9NRG9 546 aa5.42□□□□□ -1.54
RNU2-56P-201ENST00000516826 WIPF1O43516 503 aa5.41□□□□□ -1.54
RNU2-56P-201ENST00000516826 RNF40O75150 1001 aa5.41□□□□□ -1.54
RNU2-56P-201ENST00000516826 SLC4A3P48751 1232 aa5.41□□□□□ -1.54
RNU2-56P-201ENST00000516826 LMOD2Q6P5Q4 547 aa5.41□□□□□ -1.54
RNU2-56P-201ENST00000516826 CRIPAKQ8N1N5 446 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms