RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 TONSLQ96HA7 1378 aa10.07□□□□□ -0.8
SNX25-202ENST00000504273 PKD2Q13563 968 aa10.07□□□□□ -0.8
SNX25-202ENST00000504273 FOXD1Q16676 465 aa10.07□□□□□ -0.8
SNX25-202ENST00000504273 ADGRL2O95490 1459 aa10.06□□□□□ -0.8
SNX25-202ENST00000504273 PZPP20742 1482 aa10.06□□□□□ -0.8
SNX25-202ENST00000504273 ANKRD30BQ9BXX2 1392 aa10.06□□□□□ -0.8
SNX25-202ENST00000504273 DDX10Q13206 875 aaKnown RBP10.05□□□□□ -0.8
SNX25-202ENST00000504273 CDC42BPBQ9Y5S2 1711 aa10.05□□□□□ -0.8
SNX25-202ENST00000504273 CDK11AQ9UQ88 783 aaPredicted RBP10.05□□□□□ -0.8
SNX25-202ENST00000504273 PLA2R1Q13018 1463 aa10.04□□□□□ -0.8
SNX25-202ENST00000504273 TRAPPC8Q9Y2L5 1435 aa10.04□□□□□ -0.8
SNX25-202ENST00000504273 TRIM52Q96A61 297 aa10.04□□□□□ -0.8
SNX25-202ENST00000504273 CFDP1Q9UEE9 299 aaPredicted RBP10.02□□□□□ -0.8
SNX25-202ENST00000504273 RPRD2Q5VT52 1461 aaKnown RBP10.02□□□□□ -0.8
SNX25-202ENST00000504273 C9orf84Q5VXU9 1444 aa10.02□□□□□ -0.81
SNX25-202ENST00000504273 ATP10AO60312 1499 aa10.02□□□□□ -0.81
SNX25-202ENST00000504273 SAMD9LQ8IVG5 1584 aa10.01□□□□□ -0.81
SNX25-202ENST00000504273 PREX2Q70Z35 1606 aa10.01□□□□□ -0.81
SNX25-202ENST00000504273 NPATQ14207 1427 aa10□□□□□ -0.81
SNX25-202ENST00000504273 L3MBTL2Q969R5 705 aa10□□□□□ -0.81
SNX25-202ENST00000504273 MBD5Q9P267 1494 aa10□□□□□ -0.81
SNX25-202ENST00000504273 SHANK2Q9UPX8 1470 aa9.99□□□□□ -0.81
SNX25-202ENST00000504273 ARHGEF5Q12774 1597 aa9.99□□□□□ -0.81
SNX25-202ENST00000504273 CNTLNQ9NXG0 1405 aa9.99□□□□□ -0.81
SNX25-202ENST00000504273 NBPF8Q3BBV2 869 aa9.99□□□□□ -0.81
SNX25-202ENST00000504273 RGS17Q9UGC6 210 aaPredicted RBP9.99□□□□□ -0.81
SNX25-202ENST00000504273 PPP6R1Q9UPN7 881 aa9.99□□□□□ -0.81
SNX25-202ENST00000504273 CAMSAP1Q5T5Y3 1602 aa9.99□□□□□ -0.81
SNX25-202ENST00000504273 PLEKHD1A6NEE1 506 aa9.98□□□□□ -0.81
SNX25-202ENST00000504273 ZNF777Q9ULD5 760 aaPredicted RBP9.98□□□□□ -0.81
SNX25-202ENST00000504273 ZNF335Q9H4Z2 1342 aaPredicted RBP9.98□□□□□ -0.81
SNX25-202ENST00000504273 POLR1AO95602 1720 aaPredicted RBP9.97□□□□□ -0.81
SNX25-202ENST00000504273 REREQ9P2R6 1566 aa9.97□□□□□ -0.81
SNX25-202ENST00000504273 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.97□□□□□ -0.81
SNX25-202ENST00000504273 HSPA5P11021 654 aaKnown RBP9.97□□□□□ -0.81
SNX25-202ENST00000504273 KDM5DQ9BY66 1539 aa9.96□□□□□ -0.81
SNX25-202ENST00000504273 AGLP35573 1532 aa9.96□□□□□ -0.81
SNX25-202ENST00000504273 WASHC2AQ641Q2 1341 aa9.96□□□□□ -0.82
SNX25-202ENST00000504273 C11orf95C9JLR9 678 aaPredicted RBP9.96□□□□□ -0.82
SNX25-202ENST00000504273 PIP4K2BP78356 416 aa9.96□□□□□ -0.82
SNX25-202ENST00000504273 C3P01024 1663 aa9.96□□□□□ -0.82
SNX25-202ENST00000504273 SPATA31E1Q6ZUB1 1445 aa9.95□□□□□ -0.82
SNX25-202ENST00000504273 SIGLEC1Q9BZZ2 1709 aa9.95□□□□□ -0.82
SNX25-202ENST00000504273 SLC4A1APQ9BWU0 796 aaKnown RBP9.95□□□□□ -0.82
SNX25-202ENST00000504273 ANKRD50Q9ULJ7 1429 aa9.95□□□□□ -0.82
SNX25-202ENST00000504273 KIAA1107Q9UPP5 1409 aa9.95□□□□□ -0.82
SNX25-202ENST00000504273 ANKRD30AQ9BXX3 1397 aa9.95□□□□□ -0.82
SNX25-202ENST00000504273 UPF1Q92900 1129 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNX25-202ENST00000504273 MLECQ14165 292 aa9.94□□□□□ -0.82
SNX25-202ENST00000504273 HNRNPMP52272 730 aaKnown RBP eCLIP9.94□□□□□ -0.821e-6■■■■□ 20
SNX25-202ENST00000504273 ZNF142P52746 1687 aaPredicted RBP9.93□□□□□ -0.82
SNX25-202ENST00000504273 MYO5CQ9NQX4 1742 aa9.93□□□□□ -0.82
SNX25-202ENST00000504273 MAST1Q9Y2H9 1570 aa9.92□□□□□ -0.82
SNX25-202ENST00000504273 CEBPAP49715 358 aaPredicted RBP9.92□□□□□ -0.82
SNX25-202ENST00000504273 CCER2I3L3R5 266 aa9.92□□□□□ -0.82
SNX25-202ENST00000504273 ESF1Q9H501 851 aaKnown RBP9.92□□□□□ -0.82
SNX25-202ENST00000504273 SYCP2Q9BX26 1530 aa9.92□□□□□ -0.82
SNX25-202ENST00000504273 MROH2AA6NES4 1674 aa9.91□□□□□ -0.82
SNX25-202ENST00000504273 IFFO2Q5TF58 517 aa9.91□□□□□ -0.82
SNX25-202ENST00000504273 POTEAQ6S8J7 498 aa9.9□□□□□ -0.82
SNX25-202ENST00000504273 CCDC141Q6ZP82 1450 aa9.9□□□□□ -0.82
SNX25-202ENST00000504273 UNC13BO14795 1591 aa9.89□□□□□ -0.83
SNX25-202ENST00000504273 KIF15Q9NS87 1388 aa9.89□□□□□ -0.83
SNX25-202ENST00000504273 EIF4G2P78344 907 aaKnown RBP eCLIP9.89□□□□□ -0.83
SNX25-202ENST00000504273 KDM5CP41229 1560 aa9.89□□□□□ -0.83
SNX25-202ENST00000504273 CCDC7Q96M83 1385 aa9.88□□□□□ -0.83
SNX25-202ENST00000504273 ANP32CO43423 234 aa9.88□□□□□ -0.83
SNX25-202ENST00000504273 NUP155O75694 1391 aa9.88□□□□□ -0.83
SNX25-202ENST00000504273 ARHGAP5Q13017 1502 aa9.88□□□□□ -0.83
SNX25-202ENST00000504273 PLXNC1O60486 1568 aa9.88□□□□□ -0.83
SNX25-202ENST00000504273 CDK12Q9NYV4 1490 aaPredicted RBP9.87□□□□□ -0.83
SNX25-202ENST00000504273 NCKAP5LQ9HCH0 1330 aa9.87□□□□□ -0.83
SNX25-202ENST00000504273 SUPT16HQ9Y5B9 1047 aaKnown RBP9.87□□□□□ -0.83
SNX25-202ENST00000504273 FAM135AQ9P2D6 1515 aa9.87□□□□□ -0.83
SNX25-202ENST00000504273 RNF17Q9BXT8 1623 aaKnown RBP9.87□□□□□ -0.83
SNX25-202ENST00000504273 ALKQ9UM73 1620 aa9.85□□□□□ -0.83
SNX25-202ENST00000504273 TSPY4P0CV99 314 aa9.85□□□□□ -0.83
SNX25-202ENST00000504273 TSPY10P0CW01 314 aa9.85□□□□□ -0.83
SNX25-202ENST00000504273 CCDC184Q52MB2 194 aa9.85□□□□□ -0.83
SNX25-202ENST00000504273 SYNMO15061 1565 aa9.85□□□□□ -0.83
SNX25-202ENST00000504273 SETD1AO15047 1707 aaKnown RBP9.85□□□□□ -0.83
SNX25-202ENST00000504273 IQGAP3Q86VI3 1631 aa9.85□□□□□ -0.83
SNX25-202ENST00000504273 KIF7Q2M1P5 1343 aa9.84□□□□□ -0.83
SNX25-202ENST00000504273 PLCH2O75038 1416 aa9.84□□□□□ -0.83
SNX25-202ENST00000504273 ABCC1P33527 1531 aa9.84□□□□□ -0.83
SNX25-202ENST00000504273 RALGAPBQ86X10 1494 aa9.83□□□□□ -0.84
SNX25-202ENST00000504273 PLEKHH2Q8IVE3 1493 aa9.82□□□□□ -0.84
SNX25-202ENST00000504273 CEP170BQ9Y4F5 1589 aaPredicted RBP9.82□□□□□ -0.84
SNX25-202ENST00000504273 RSPH4AQ5TD94 716 aa9.82□□□□□ -0.84
SNX25-202ENST00000504273 TRPM1Q7Z4N2 1603 aa9.81□□□□□ -0.84
SNX25-202ENST00000504273 DHX29Q7Z478 1369 aaKnown RBP9.81□□□□□ -0.84
SNX25-202ENST00000504273 SCAPERQ9BY12 1400 aa9.81□□□□□ -0.84
SNX25-202ENST00000504273 ZNF772Q68DY9 489 aaPredicted RBP9.81□□□□□ -0.84
SNX25-202ENST00000504273 MYO3AQ8NEV4 1616 aa9.8□□□□□ -0.84
SNX25-202ENST00000504273 FAM135BQ49AJ0 1406 aa9.8□□□□□ -0.84
SNX25-202ENST00000504273 DUOX2Q9NRD8 1548 aa9.8□□□□□ -0.84
SNX25-202ENST00000504273 USP47Q96K76 1375 aa9.8□□□□□ -0.84
SNX25-202ENST00000504273 ZNF518AQ6AHZ1 1483 aa9.79□□□□□ -0.84
SNX25-202ENST00000504273 ZRANB1Q9UGI0 708 aa9.79□□□□□ -0.84
SNX25-202ENST00000504273 PRKRIP1Q9H875 184 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms