RNA–Protein interactions for RNA: ENST00000503299.1

AC109349.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC109349.1, Length 758 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109349.1-201ENST00000503299 PCDHGA10Q9Y5H3 936 aa12.89□□□□□ -0.35
AC109349.1-201ENST00000503299 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
AC109349.1-201ENST00000503299 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
AC109349.1-201ENST00000503299 KIAA1468Q9P260 1216 aa12.87□□□□□ -0.35
AC109349.1-201ENST00000503299 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
AC109349.1-201ENST00000503299 RYDENQ9NUL5 291 aaKnown RBP12.83□□□□□ -0.36
AC109349.1-201ENST00000503299 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
AC109349.1-201ENST00000503299 TSR3Q9UJK0 312 aaKnown RBP12.82□□□□□ -0.36
AC109349.1-201ENST00000503299 NRG2O14511 850 aaPredicted RBP12.81□□□□□ -0.36
AC109349.1-201ENST00000503299 TYW1BQ6NUM6 668 aa12.81□□□□□ -0.36
AC109349.1-201ENST00000503299 NKX1-1Q15270 411 aaPredicted RBP12.79□□□□□ -0.36
AC109349.1-201ENST00000503299 DNAJC5Q9H3Z4 198 aa12.79□□□□□ -0.36
AC109349.1-201ENST00000503299 SEPT9Q9UHD8 586 aaPredicted RBP12.79□□□□□ -0.36
AC109349.1-201ENST00000503299 PHF14O94880 888 aa12.78□□□□□ -0.36
AC109349.1-201ENST00000503299 CHGAP10645 457 aaKnown RBP12.78□□□□□ -0.36
AC109349.1-201ENST00000503299 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.78□□□□□ -0.36
AC109349.1-201ENST00000503299 HPS5Q9UPZ3 1129 aa12.78□□□□□ -0.36
AC109349.1-201ENST00000503299 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.37
AC109349.1-201ENST00000503299 PRKD2Q9BZL6 878 aa12.77□□□□□ -0.37
AC109349.1-201ENST00000503299 DDX27Q96GQ7 796 aaKnown RBP12.76□□□□□ -0.37
AC109349.1-201ENST00000503299 LRCH3Q96II8 777 aa12.76□□□□□ -0.37
AC109349.1-201ENST00000503299 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
AC109349.1-201ENST00000503299 ZNF787Q6DD87 383 aa12.75□□□□□ -0.37
AC109349.1-201ENST00000503299 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
AC109349.1-201ENST00000503299 EMILIN3Q9NT22 766 aa12.73□□□□□ -0.37
AC109349.1-201ENST00000503299 C6orf132Q5T0Z8 1188 aa12.72□□□□□ -0.37
AC109349.1-201ENST00000503299 V9GY48 417 aaPredicted RBP12.71□□□□□ -0.37
AC109349.1-201ENST00000503299 MFSD10Q14728 455 aa12.7□□□□□ -0.38
AC109349.1-201ENST00000503299 TJAP1Q5JTD0 557 aa12.69□□□□□ -0.38
AC109349.1-201ENST00000503299 EPAS1Q99814 870 aa12.68□□□□□ -0.38
AC109349.1-201ENST00000503299 PPP4CP60510 307 aa12.66□□□□□ -0.38
AC109349.1-201ENST00000503299 ZNF775Q96BV0 537 aaPredicted RBP12.66□□□□□ -0.38
AC109349.1-201ENST00000503299 PPP1R18Q6NYC8 613 aa12.65□□□□□ -0.38
AC109349.1-201ENST00000503299 PDZRN3Q9UPQ7 1066 aa12.62□□□□□ -0.39
AC109349.1-201ENST00000503299 IL21Q9HBE4 155 aa12.6□□□□□ -0.39
AC109349.1-201ENST00000503299 MTRQ99707 1265 aa12.59□□□□□ -0.39
AC109349.1-201ENST00000503299 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.59□□□□□ -0.39
AC109349.1-201ENST00000503299 PACS2Q86VP3 889 aa12.58□□□□□ -0.4
AC109349.1-201ENST00000503299 RBM33Q96EV2 1170 aaKnown RBP12.56□□□□□ -0.4
AC109349.1-201ENST00000503299 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
AC109349.1-201ENST00000503299 GTPBP6O43824 516 aaPredicted RBP12.53□□□□□ -0.4
AC109349.1-201ENST00000503299 SAMD7Q7Z3H4 446 aa12.53□□□□□ -0.4
AC109349.1-201ENST00000503299 ZNF516Q92618 1163 aa12.52□□□□□ -0.41
AC109349.1-201ENST00000503299 DPYSL4O14531 572 aa12.46□□□□□ -0.41
AC109349.1-201ENST00000503299 CAMK2BQ13554 666 aa12.46□□□□□ -0.41
AC109349.1-201ENST00000503299 DDX12PQ92771 950 aa12.46□□□□□ -0.41
AC109349.1-201ENST00000503299 SMAPO00193 183 aa12.45□□□□□ -0.42
AC109349.1-201ENST00000503299 GGCXP38435 758 aa12.45□□□□□ -0.42
AC109349.1-201ENST00000503299 EN1Q05925 392 aaPredicted RBP12.44□□□□□ -0.42
AC109349.1-201ENST00000503299 NKX2-3Q8TAU0 364 aa12.44□□□□□ -0.42
AC109349.1-201ENST00000503299 TSR1Q2NL82 804 aaKnown RBP12.43□□□□□ -0.42
AC109349.1-201ENST00000503299 MAP3K7O43318 606 aa12.42□□□□□ -0.42
AC109349.1-201ENST00000503299 CDCA7LQ96GN5 454 aa12.42□□□□□ -0.42
AC109349.1-201ENST00000503299 APLP1P51693 650 aa12.41□□□□□ -0.42
AC109349.1-201ENST00000503299 TMUB1Q9BVT8 246 aa12.41□□□□□ -0.42
AC109349.1-201ENST00000503299 PRSS12P56730 875 aa12.39□□□□□ -0.43
AC109349.1-201ENST00000503299 NBR1Q14596 966 aa12.39□□□□□ -0.43
AC109349.1-201ENST00000503299 TRIM67Q6ZTA4 783 aa12.39□□□□□ -0.43
AC109349.1-201ENST00000503299 CADPS2Q86UW7 1296 aa12.39□□□□□ -0.43
AC109349.1-201ENST00000503299 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
AC109349.1-201ENST00000503299 MYT1Q01538 1121 aa12.38□□□□□ -0.43
AC109349.1-201ENST00000503299 TATDN2Q93075 761 aa12.38□□□□□ -0.43
AC109349.1-201ENST00000503299 DGAT1O75907 488 aa12.36□□□□□ -0.43
AC109349.1-201ENST00000503299 HDGFP51858 240 aaKnown RBP12.36□□□□□ -0.43
AC109349.1-201ENST00000503299 PKDCCQ504Y2 493 aa12.36□□□□□ -0.43
AC109349.1-201ENST00000503299 POTECB2RU33 542 aa12.35□□□□□ -0.43
AC109349.1-201ENST00000503299 NBPF26B4DH59 902 aa12.35□□□□□ -0.43
AC109349.1-201ENST00000503299 C3orf80F5H4A9 247 aa12.35□□□□□ -0.43
AC109349.1-201ENST00000503299 CERKQ8TCT0 537 aa12.35□□□□□ -0.43
AC109349.1-201ENST00000503299 PNMA3Q9UL41 463 aa12.35□□□□□ -0.43
AC109349.1-201ENST00000503299 RNF40O75150 1001 aa12.34□□□□□ -0.43
AC109349.1-201ENST00000503299 COPS2P61201 443 aa12.32□□□□□ -0.44
AC109349.1-201ENST00000503299 SLC19A1P41440 591 aa12.31□□□□□ -0.44
AC109349.1-201ENST00000503299 NECTIN2Q92692 538 aa12.31□□□□□ -0.44
AC109349.1-201ENST00000503299 TREML4Q6UXN2 200 aa12.3□□□□□ -0.44
AC109349.1-201ENST00000503299 ZPR1O75312 459 aa12.28□□□□□ -0.44
AC109349.1-201ENST00000503299 PRR20EP86478 221 aa12.28□□□□□ -0.44
AC109349.1-201ENST00000503299 PRR20CP86479 221 aa12.28□□□□□ -0.44
AC109349.1-201ENST00000503299 PRR20DP86480 221 aa12.28□□□□□ -0.44
AC109349.1-201ENST00000503299 PRR20BP86481 221 aa12.28□□□□□ -0.44
AC109349.1-201ENST00000503299 PRR20AP86496 221 aa12.28□□□□□ -0.44
AC109349.1-201ENST00000503299 LCE2AQ5TA79 106 aaPredicted RBP12.28□□□□□ -0.44
AC109349.1-201ENST00000503299 NUDT18Q6ZVK8 323 aa12.27□□□□□ -0.45
AC109349.1-201ENST00000503299 EMID1Q96A84 441 aaPredicted RBP12.27□□□□□ -0.45
AC109349.1-201ENST00000503299 PDIA6Q15084 440 aa12.26□□□□□ -0.45
AC109349.1-201ENST00000503299 RNF223E7ERA6 249 aa12.25□□□□□ -0.45
AC109349.1-201ENST00000503299 SPRYD7Q5W111 196 aa12.25□□□□□ -0.45
AC109349.1-201ENST00000503299 ZNF598Q86UK7 904 aaKnown RBP12.25□□□□□ -0.45
AC109349.1-201ENST00000503299 SLF2Q8IX21 1173 aa12.23□□□□□ -0.45
AC109349.1-201ENST00000503299 SPDYE16A6NNV3 312 aaPredicted RBP12.22□□□□□ -0.45
AC109349.1-201ENST00000503299 PRIM1P49642 420 aaKnown RBP12.21□□□□□ -0.45
AC109349.1-201ENST00000503299 FAM187AA6NFU0 413 aa12.2□□□□□ -0.46
AC109349.1-201ENST00000503299 SWT1Q5T5J6 900 aaKnown RBP12.2□□□□□ -0.46
AC109349.1-201ENST00000503299 RBM27Q9P2N5 1060 aaKnown RBP12.2□□□□□ -0.46
AC109349.1-201ENST00000503299 ANKLE1Q8NAG6 615 aa12.17□□□□□ -0.46
AC109349.1-201ENST00000503299 GDF9O60383 454 aa12.16□□□□□ -0.46
AC109349.1-201ENST00000503299 ZNF697Q5TEC3 545 aa12.16□□□□□ -0.46
AC109349.1-201ENST00000503299 PRR14Q9BWN1 585 aa12.16□□□□□ -0.46
AC109349.1-201ENST00000503299 PCDHB3Q9Y5E6 796 aa12.16□□□□□ -0.46
AC109349.1-201ENST00000503299 SLC4A3P48751 1232 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms