RNA–Protein interactions for RNA: ENST00000498713.1

ANKRD28-214, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 1,091 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-214ENST00000498713 V9GY48 417 aaPredicted RBP12.57□□□□□ -0.4
ANKRD28-214ENST00000498713 COL9A1P20849 921 aa12.56□□□□□ -0.4
ANKRD28-214ENST00000498713 EVI5O60447 810 aa12.55□□□□□ -0.4
ANKRD28-214ENST00000498713 DCAF1Q9Y4B6 1507 aa12.54□□□□□ -0.4
ANKRD28-214ENST00000498713 TSR3Q9UJK0 312 aaKnown RBP12.53□□□□□ -0.4
ANKRD28-214ENST00000498713 KIAA1468Q9P260 1216 aa12.52□□□□□ -0.41
ANKRD28-214ENST00000498713 ECM2O94769 699 aaPredicted RBP12.51□□□□□ -0.41
ANKRD28-214ENST00000498713 PPP1R15BQ5SWA1 713 aa12.51□□□□□ -0.41
ANKRD28-214ENST00000498713 CRISPLD2Q9H0B8 497 aa12.51□□□□□ -0.41
ANKRD28-214ENST00000498713 RGL2O15211 777 aa12.49□□□□□ -0.41
ANKRD28-214ENST00000498713 ONECUT3O60422 494 aaPredicted RBP12.49□□□□□ -0.41
ANKRD28-214ENST00000498713 PDZRN3Q9UPQ7 1066 aa12.49□□□□□ -0.41
ANKRD28-214ENST00000498713 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
ANKRD28-214ENST00000498713 SEPT9Q9UHD8 586 aaPredicted RBP12.47□□□□□ -0.41
ANKRD28-214ENST00000498713 PCDHGA10Q9Y5H3 936 aa12.47□□□□□ -0.41
ANKRD28-214ENST00000498713 TJAP1Q5JTD0 557 aa12.46□□□□□ -0.41
ANKRD28-214ENST00000498713 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.46□□□□□ -0.41
ANKRD28-214ENST00000498713 MYO15BQ96JP2 1530 aa12.45□□□□□ -0.42
ANKRD28-214ENST00000498713 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
ANKRD28-214ENST00000498713 PPP1R18Q6NYC8 613 aa12.44□□□□□ -0.42
ANKRD28-214ENST00000498713 LRCH3Q96II8 777 aa12.44□□□□□ -0.42
ANKRD28-214ENST00000498713 NACADO15069 1562 aa12.41□□□□□ -0.42
ANKRD28-214ENST00000498713 FBXW7Q969H0 707 aa12.39□□□□□ -0.43
ANKRD28-214ENST00000498713 LCE2AQ5TA79 106 aaPredicted RBP12.38□□□□□ -0.43
ANKRD28-214ENST00000498713 TYW1BQ6NUM6 668 aa12.37□□□□□ -0.43
ANKRD28-214ENST00000498713 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
ANKRD28-214ENST00000498713 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.36□□□□□ -0.43
ANKRD28-214ENST00000498713 IL21Q9HBE4 155 aa12.34□□□□□ -0.43
ANKRD28-214ENST00000498713 NCKAP5LQ9HCH0 1330 aa12.34□□□□□ -0.43
ANKRD28-214ENST00000498713 PHF14O94880 888 aa12.33□□□□□ -0.44
ANKRD28-214ENST00000498713 TREML4Q6UXN2 200 aa12.33□□□□□ -0.44
ANKRD28-214ENST00000498713 MTRQ99707 1265 aa12.33□□□□□ -0.44
ANKRD28-214ENST00000498713 POTECB2RU33 542 aa12.32□□□□□ -0.44
ANKRD28-214ENST00000498713 PPP4CP60510 307 aa12.32□□□□□ -0.44
ANKRD28-214ENST00000498713 MAP3K9P80192 1104 aa12.32□□□□□ -0.44
ANKRD28-214ENST00000498713 RB1CC1Q8TDY2 1594 aa12.31□□□□□ -0.44
ANKRD28-214ENST00000498713 PKD2Q13563 968 aa12.3□□□□□ -0.44
ANKRD28-214ENST00000498713 MYT1Q01538 1121 aa12.29□□□□□ -0.44
ANKRD28-214ENST00000498713 PDE4AP27815 886 aa12.28□□□□□ -0.44
ANKRD28-214ENST00000498713 C6orf132Q5T0Z8 1188 aa12.28□□□□□ -0.44
ANKRD28-214ENST00000498713 TRIM67Q6ZTA4 783 aa12.28□□□□□ -0.44
ANKRD28-214ENST00000498713 HS6ST3Q8IZP7 471 aa12.26□□□□□ -0.45
ANKRD28-214ENST00000498713 SHROOM4Q9ULL8 1493 aa12.26□□□□□ -0.45
ANKRD28-214ENST00000498713 ZNF516Q92618 1163 aa12.25□□□□□ -0.45
ANKRD28-214ENST00000498713 LOC100996750A0A140TA64 210 aa12.23□□□□□ -0.45
ANKRD28-214ENST00000498713 KRTAP4-6Q9BYQ5 205 aa12.23□□□□□ -0.45
ANKRD28-214ENST00000498713 EMILIN3Q9NT22 766 aa12.23□□□□□ -0.45
ANKRD28-214ENST00000498713 DGAT1O75907 488 aa12.22□□□□□ -0.45
ANKRD28-214ENST00000498713 PKDCCQ504Y2 493 aa12.22□□□□□ -0.45
ANKRD28-214ENST00000498713 EPAS1Q99814 870 aa12.2□□□□□ -0.46
ANKRD28-214ENST00000498713 NKX2-3Q8TAU0 364 aa12.19□□□□□ -0.46
ANKRD28-214ENST00000498713 DDX27Q96GQ7 796 aaKnown RBP12.18□□□□□ -0.46
ANKRD28-214ENST00000498713 STK17AQ9UEE5 414 aa12.18□□□□□ -0.46
ANKRD28-214ENST00000498713 SCRIBQ14160 1630 aa12.18□□□□□ -0.46
ANKRD28-214ENST00000498713 GGCXP38435 758 aa12.17□□□□□ -0.46
ANKRD28-214ENST00000498713 SAMD7Q7Z3H4 446 aa12.17□□□□□ -0.46
ANKRD28-214ENST00000498713 MFSD10Q14728 455 aa12.16□□□□□ -0.46
ANKRD28-214ENST00000498713 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
ANKRD28-214ENST00000498713 TSKSQ9UJT2 592 aa12.16□□□□□ -0.46
ANKRD28-214ENST00000498713 UNC13AQ9UPW8 1703 aa12.16□□□□□ -0.46
ANKRD28-214ENST00000498713 PACS2Q86VP3 889 aa12.15□□□□□ -0.46
ANKRD28-214ENST00000498713 LARP6Q9BRS8 491 aaKnown RBP12.14□□□□□ -0.47
ANKRD28-214ENST00000498713 PRR20EP86478 221 aa12.13□□□□□ -0.47
ANKRD28-214ENST00000498713 PRR20CP86479 221 aa12.13□□□□□ -0.47
ANKRD28-214ENST00000498713 PRR20DP86480 221 aa12.13□□□□□ -0.47
ANKRD28-214ENST00000498713 PRR20BP86481 221 aa12.13□□□□□ -0.47
ANKRD28-214ENST00000498713 PRR20AP86496 221 aa12.13□□□□□ -0.47
ANKRD28-214ENST00000498713 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
ANKRD28-214ENST00000498713 RYDENQ9NUL5 291 aaKnown RBP12.11□□□□□ -0.47
ANKRD28-214ENST00000498713 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
ANKRD28-214ENST00000498713 DNAJC5Q9H3Z4 198 aa12.1□□□□□ -0.47
ANKRD28-214ENST00000498713 APLP1P51693 650 aa12.09□□□□□ -0.47
ANKRD28-214ENST00000498713 SLC19A1P41440 591 aa12.07□□□□□ -0.48
ANKRD28-214ENST00000498713 RBM33Q96EV2 1170 aaKnown RBP12.07□□□□□ -0.48
ANKRD28-214ENST00000498713 SMAPO00193 183 aa12.05□□□□□ -0.48
ANKRD28-214ENST00000498713 WFS1O76024 890 aa12.05□□□□□ -0.48
ANKRD28-214ENST00000498713 SPRYD7Q5W111 196 aa12.05□□□□□ -0.48
ANKRD28-214ENST00000498713 WIPF1O43516 503 aa12.04□□□□□ -0.48
ANKRD28-214ENST00000498713 ZNF598Q86UK7 904 aaKnown RBP12.04□□□□□ -0.48
ANKRD28-214ENST00000498713 AAASQ9NRG9 546 aa12.04□□□□□ -0.48
ANKRD28-214ENST00000498713 FAM187AA6NFU0 413 aa12.03□□□□□ -0.48
ANKRD28-214ENST00000498713 ST8SIA5O15466 376 aa12.02□□□□□ -0.49
ANKRD28-214ENST00000498713 RNF223E7ERA6 249 aa12□□□□□ -0.49
ANKRD28-214ENST00000498713 COPS2P61201 443 aa12□□□□□ -0.49
ANKRD28-214ENST00000498713 INSM1Q01101 510 aaPredicted RBP12□□□□□ -0.49
ANKRD28-214ENST00000498713 FAM198AQ9UFP1 575 aa12□□□□□ -0.49
ANKRD28-214ENST00000498713 BICRAQ9NZM4 1560 aa12□□□□□ -0.49
ANKRD28-214ENST00000498713 C3orf80F5H4A9 247 aa11.98□□□□□ -0.49
ANKRD28-214ENST00000498713 GDF9O60383 454 aa11.98□□□□□ -0.49
ANKRD28-214ENST00000498713 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
ANKRD28-214ENST00000498713 TSR1Q2NL82 804 aaKnown RBP11.98□□□□□ -0.49
ANKRD28-214ENST00000498713 ZPR1O75312 459 aa11.97□□□□□ -0.49
ANKRD28-214ENST00000498713 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
ANKRD28-214ENST00000498713 NFX1Q12986 1120 aaKnown RBP11.97□□□□□ -0.49
ANKRD28-214ENST00000498713 CDCA7LQ96GN5 454 aa11.97□□□□□ -0.49
ANKRD28-214ENST00000498713 RNF40O75150 1001 aa11.95□□□□□ -0.5
ANKRD28-214ENST00000498713 PRSS12P56730 875 aa11.94□□□□□ -0.5
ANKRD28-214ENST00000498713 ZNF697Q5TEC3 545 aa11.94□□□□□ -0.5
ANKRD28-214ENST00000498713 TATDN2Q93075 761 aa11.94□□□□□ -0.5
ANKRD28-214ENST00000498713 NBPF26B4DH59 902 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms