RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 SMARCA5O60264 1052 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-220ENST00000492859 CANXP27824 592 aaKnown RBP5.85□□□□□ -1.47
BRCA1-220ENST00000492859 IRX5P78411 483 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-220ENST00000492859 FAM43BQ6ZT52 329 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-220ENST00000492859 GPBP1L1Q9HC44 474 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-220ENST00000492859 NAP1L2Q9ULW6 460 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-220ENST00000492859 PLEKHD1A6NEE1 506 aa5.84□□□□□ -1.47
BRCA1-220ENST00000492859 SEC24BO95487 1268 aa5.84□□□□□ -1.47
BRCA1-220ENST00000492859 ZNF467Q7Z7K2 595 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-220ENST00000492859 WWC1Q8IX03 1113 aa5.84□□□□□ -1.47
BRCA1-220ENST00000492859 RETREG2Q8NC44 543 aa5.84□□□□□ -1.47
BRCA1-220ENST00000492859 SECISBP2LQ93073 1101 aaKnown RBP5.84□□□□□ -1.47
BRCA1-220ENST00000492859 IGSF5Q9NSI5 407 aa5.84□□□□□ -1.47
BRCA1-220ENST00000492859 TRAK2O60296 914 aa5.84□□□□□ -1.48
BRCA1-220ENST00000492859 BRD1O95696 1058 aa5.84□□□□□ -1.48
BRCA1-220ENST00000492859 AMOTL2Q9Y2J4 779 aa5.84□□□□□ -1.48
BRCA1-220ENST00000492859 NOL8Q76FK4 1167 aaKnown RBP5.83□□□□□ -1.48
BRCA1-220ENST00000492859 ANKRD13AQ8IZ07 590 aa5.83□□□□□ -1.48
BRCA1-220ENST00000492859 SPATA32Q96LK8 384 aa5.83□□□□□ -1.48
BRCA1-220ENST00000492859 PDAP1Q13442 181 aaKnown RBP5.82□□□□□ -1.48
BRCA1-220ENST00000492859 P3H3Q8IVL6 736 aa5.82□□□□□ -1.48
BRCA1-220ENST00000492859 CABP2Q9NPB3 220 aa5.82□□□□□ -1.48
BRCA1-220ENST00000492859 SALL2Q9Y467 1007 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-220ENST00000492859 FAM50AQ14320 339 aaKnown RBP5.81□□□□□ -1.48
BRCA1-220ENST00000492859 IER5LQ5T953 404 aa5.81□□□□□ -1.48
BRCA1-220ENST00000492859 DPY19L2Q6NUT2 758 aa5.81□□□□□ -1.48
BRCA1-220ENST00000492859 TMTC2Q8N394 836 aa5.81□□□□□ -1.48
BRCA1-220ENST00000492859 PDCD7Q8N8D1 485 aaKnown RBP5.81□□□□□ -1.48
BRCA1-220ENST00000492859 IPO4Q8TEX9 1081 aaKnown RBP5.81□□□□□ -1.48
BRCA1-220ENST00000492859 KCNG1Q9UIX4 513 aa5.81□□□□□ -1.48
BRCA1-220ENST00000492859 UNCXA6NJT0 531 aa5.8□□□□□ -1.48
BRCA1-220ENST00000492859 CLUAP1Q96AJ1 413 aa5.8□□□□□ -1.48
BRCA1-220ENST00000492859 A6NJR5 290 aa5.8□□□□□ -1.48
BRCA1-220ENST00000492859 NEFMP07197 916 aa5.8□□□□□ -1.48
BRCA1-220ENST00000492859 PLCG2P16885 1265 aa5.8□□□□□ -1.48
BRCA1-220ENST00000492859 DEKP35659 375 aaKnown RBP5.8□□□□□ -1.48
BRCA1-220ENST00000492859 GLIPR1L2Q4G1C9 344 aa5.8□□□□□ -1.48
BRCA1-220ENST00000492859 KCNV2Q8TDN2 545 aa5.8□□□□□ -1.48
BRCA1-220ENST00000492859 SGSM3Q96HU1 749 aa5.8□□□□□ -1.48
BRCA1-220ENST00000492859 LAS1LQ9Y4W2 734 aaKnown RBP5.8□□□□□ -1.48
BRCA1-220ENST00000492859 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-220ENST00000492859 GTPBP6O43824 516 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-220ENST00000492859 PTMAP06454 111 aaKnown RBP5.79□□□□□ -1.48
BRCA1-220ENST00000492859 NKX1-1Q15270 411 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-220ENST00000492859 HS6ST3Q8IZP7 471 aa5.79□□□□□ -1.48
BRCA1-220ENST00000492859 ZC3H4Q9UPT8 1303 aaKnown RBP5.79□□□□□ -1.48
BRCA1-220ENST00000492859 RIOK3O14730 519 aaKnown RBP5.78□□□□□ -1.48
BRCA1-220ENST00000492859 MARCH6O60337 910 aa5.78□□□□□ -1.48
BRCA1-220ENST00000492859 FLIIQ13045 1269 aa5.78□□□□□ -1.48
BRCA1-220ENST00000492859 LCE2DQ5TA82 110 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-220ENST00000492859 EFCAB3Q8N7B9 438 aa5.78□□□□□ -1.48
BRCA1-220ENST00000492859 OCEL1Q9H607 264 aa5.78□□□□□ -1.48
BRCA1-220ENST00000492859 ZMYND10O75800 440 aa5.77□□□□□ -1.49
BRCA1-220ENST00000492859 OS9Q13438 667 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-220ENST00000492859 SPTY2D1Q68D10 685 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-220ENST00000492859 MYH16Q9H6N6 1097 aa5.77□□□□□ -1.49
BRCA1-220ENST00000492859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.77□□□□□ -1.494e-6■■■■■ 27.4
BRCA1-220ENST00000492859 TPD52L2O43399 206 aaKnown RBP5.76□□□□□ -1.49
BRCA1-220ENST00000492859 ONECUT3O60422 494 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-220ENST00000492859 GOLGA2Q08379 1002 aa5.76□□□□□ -1.49
BRCA1-220ENST00000492859 SLC52A1Q9NWF4 448 aa5.76□□□□□ -1.49
BRCA1-220ENST00000492859 PPME1Q9Y570 386 aa5.76□□□□□ -1.49
BRCA1-220ENST00000492859 FOXD4L6Q3SYB3 417 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-220ENST00000492859 FOXD4L3Q6VB84 417 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-220ENST00000492859 FTSJ3Q8IY81 847 aaKnown RBP5.75□□□□□ -1.49
BRCA1-220ENST00000492859 FAM9BQ8IZU0 186 aa5.75□□□□□ -1.49
BRCA1-220ENST00000492859 TRIM41Q8WV44 630 aa5.75□□□□□ -1.49
BRCA1-220ENST00000492859 SIRT1Q96EB6 747 aa5.75□□□□□ -1.49
BRCA1-220ENST00000492859 KDM4CQ9H3R0 1056 aa5.75□□□□□ -1.49
BRCA1-220ENST00000492859 SCUBE2Q9NQ36 999 aa5.75□□□□□ -1.49
BRCA1-220ENST00000492859 ZNF777Q9ULD5 760 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-220ENST00000492859 SUGT1Q9Y2Z0 365 aa5.75□□□□□ -1.49
BRCA1-220ENST00000492859 ARIH1Q9Y4X5 557 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-220ENST00000492859 ILDR1Q86SU0 546 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-220ENST00000492859 ANKRD62A6NC57 917 aa5.73□□□□□ -1.49
BRCA1-220ENST00000492859 MAMSTRQ6ZN01 415 aa5.73□□□□□ -1.49
BRCA1-220ENST00000492859 SLAIN1Q8ND83 568 aa5.73□□□□□ -1.49
BRCA1-220ENST00000492859 FAM163AQ96GL9 167 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-220ENST00000492859 RBM27Q9P2N5 1060 aaKnown RBP5.73□□□□□ -1.49
BRCA1-220ENST00000492859 SERPINA10Q9UK55 444 aa5.73□□□□□ -1.49
BRCA1-220ENST00000492859 GORABQ5T7V8 394 aa5.72□□□□□ -1.49
BRCA1-220ENST00000492859 CCDC97Q96F63 343 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-220ENST00000492859 MS4A4AQ96JQ5 239 aa5.72□□□□□ -1.49
BRCA1-220ENST00000492859 MYT1LQ9UL68 1186 aa5.72□□□□□ -1.49
BRCA1-220ENST00000492859 PHF8Q9UPP1 1060 aa5.72□□□□□ -1.49
BRCA1-220ENST00000492859 VGFO15240 615 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-220ENST00000492859 NME8Q8N427 588 aa5.72□□□□□ -1.49
BRCA1-220ENST00000492859 HIRIP3Q9BW71 556 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-220ENST00000492859 CHMP4BQ9H444 224 aaKnown RBP5.72□□□□□ -1.49
BRCA1-220ENST00000492859 TERF2IPQ9NYB0 399 aa5.72□□□□□ -1.49
BRCA1-220ENST00000492859 FAM193AP78312 1265 aa5.71□□□□□ -1.5
BRCA1-220ENST00000492859 CDAN1Q8IWY9 1227 aa5.71□□□□□ -1.5
BRCA1-220ENST00000492859 APBB1IPQ7Z5R6 666 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-220ENST00000492859 STK24Q9Y6E0 443 aa5.7□□□□□ -1.5
BRCA1-220ENST00000492859 MICAL1Q8TDZ2 1067 aa5.69□□□□□ -1.5
BRCA1-220ENST00000492859 DRC1Q96MC2 740 aa5.69□□□□□ -1.5
BRCA1-220ENST00000492859 STK25O00506 426 aa5.68□□□□□ -1.5
BRCA1-220ENST00000492859 PHF14O94880 888 aa5.68□□□□□ -1.5
BRCA1-220ENST00000492859 MMRN1Q13201 1228 aa5.68□□□□□ -1.5
BRCA1-220ENST00000492859 RALBP1Q15311 655 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms