RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 BRD1O95696 1058 aa4.32□□□□□ -1.72
HMGN4-202ENST00000477243 MCM6Q14566 821 aa4.32□□□□□ -1.72
HMGN4-202ENST00000477243 SPINK5Q9NQ38 1064 aaPredicted RBP4.32□□□□□ -1.72
HMGN4-202ENST00000477243 RGS17Q9UGC6 210 aaPredicted RBP4.32□□□□□ -1.72
HMGN4-202ENST00000477243 RSF1Q96T23 1441 aaPredicted RBP4.31□□□□□ -1.72
HMGN4-202ENST00000477243 GIGYF1O75420 1035 aaPredicted RBP4.31□□□□□ -1.72
HMGN4-202ENST00000477243 AMHR2Q16671 573 aa4.31□□□□□ -1.72
HMGN4-202ENST00000477243 ZNF467Q7Z7K2 595 aaPredicted RBP4.31□□□□□ -1.72
HMGN4-202ENST00000477243 LARP6Q9BRS8 491 aaKnown RBP4.31□□□□□ -1.72
HMGN4-202ENST00000477243 BAHCC1Q9P281 2608 aa4.31□□□□□ -1.72
HMGN4-202ENST00000477243 KIAA1210Q9ULL0 1709 aa4.3□□□□□ -1.72
HMGN4-202ENST00000477243 CCDC27Q2M243 656 aa4.3□□□□□ -1.72
HMGN4-202ENST00000477243 FAM177A1Q8N128 213 aaPredicted RBP4.3□□□□□ -1.72
HMGN4-202ENST00000477243 PLSCR2Q9NRY7 297 aa4.3□□□□□ -1.72
HMGN4-202ENST00000477243 PYGBP11216 843 aa4.29□□□□□ -1.72
HMGN4-202ENST00000477243 PDAP1Q13442 181 aaKnown RBP4.29□□□□□ -1.72
HMGN4-202ENST00000477243 WWC1Q8IX03 1113 aa4.29□□□□□ -1.72
HMGN4-202ENST00000477243 DDX27Q96GQ7 796 aaKnown RBP4.29□□□□□ -1.72
HMGN4-202ENST00000477243 MFRPQ9BY79 579 aa4.29□□□□□ -1.72
HMGN4-202ENST00000477243 KIF13AQ9H1H9 1805 aa4.28□□□□□ -1.72
HMGN4-202ENST00000477243 IRF6O14896 467 aa4.28□□□□□ -1.72
HMGN4-202ENST00000477243 BRD2P25440 801 aaKnown RBP4.28□□□□□ -1.72
HMGN4-202ENST00000477243 NLRP6P59044 892 aa4.28□□□□□ -1.72
HMGN4-202ENST00000477243 MAP2K5Q13163 448 aa4.28□□□□□ -1.72
HMGN4-202ENST00000477243 CAMK2BQ13554 666 aa4.28□□□□□ -1.72
HMGN4-202ENST00000477243 MFSD10Q14728 455 aa4.28□□□□□ -1.72
HMGN4-202ENST00000477243 CCDC125Q86Z20 511 aa4.28□□□□□ -1.72
HMGN4-202ENST00000477243 POLR3GLQ9BT43 218 aa4.28□□□□□ -1.72
HMGN4-202ENST00000477243 ZNF330Q9Y3S2 320 aaPredicted RBP4.28□□□□□ -1.72
HMGN4-202ENST00000477243 MLLT3P42568 568 aaPredicted RBP4.27□□□□□ -1.73
HMGN4-202ENST00000477243 PARP9Q8IXQ6 854 aa4.27□□□□□ -1.73
HMGN4-202ENST00000477243 USTQ9Y2C2 406 aa4.27□□□□□ -1.73
HMGN4-202ENST00000477243 SPDYE5A6NIY4 337 aa4.26□□□□□ -1.73
HMGN4-202ENST00000477243 SPDYE16A6NNV3 312 aaPredicted RBP4.26□□□□□ -1.73
HMGN4-202ENST00000477243 UBAP1LF5GYI3 381 aa4.26□□□□□ -1.73
HMGN4-202ENST00000477243 PPM1GO15355 546 aaPredicted RBP4.26□□□□□ -1.73
HMGN4-202ENST00000477243 SOX12O15370 315 aa4.26□□□□□ -1.73
HMGN4-202ENST00000477243 HSPA1LP34931 641 aa4.26□□□□□ -1.73
HMGN4-202ENST00000477243 SH3D19Q5HYK7 790 aa4.26□□□□□ -1.73
HMGN4-202ENST00000477243 NCKAP5LQ9HCH0 1330 aa4.25□□□□□ -1.73
HMGN4-202ENST00000477243 ABCB7O75027 752 aa4.25□□□□□ -1.73
HMGN4-202ENST00000477243 PPP1R37O75864 691 aa4.25□□□□□ -1.73
HMGN4-202ENST00000477243 CSB-PGBD3P0DP91 1061 aa4.25□□□□□ -1.73
HMGN4-202ENST00000477243 TTLL12Q14166 644 aaPredicted RBP4.25□□□□□ -1.73
HMGN4-202ENST00000477243 SKIV2LQ15477 1246 aaKnown RBP4.25□□□□□ -1.73
HMGN4-202ENST00000477243 POTEAQ6S8J7 498 aa4.25□□□□□ -1.73
HMGN4-202ENST00000477243 CCDC102AQ96A19 550 aa4.25□□□□□ -1.73
HMGN4-202ENST00000477243 RAPGEF6Q8TEU7 1601 aa4.24□□□□□ -1.73
HMGN4-202ENST00000477243 EIF4G1Q04637 1599 aaKnown RBP4.24□□□□□ -1.73
HMGN4-202ENST00000477243 NCLP19338 710 aaKnown RBP4.24□□□□□ -1.73
HMGN4-202ENST00000477243 SND1Q7KZF4 910 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGN4-202ENST00000477243 RASEFQ8IZ41 740 aa4.24□□□□□ -1.73
HMGN4-202ENST00000477243 POM121Q96HA1 1249 aa4.24□□□□□ -1.73
HMGN4-202ENST00000477243 CALR3Q96L12 384 aaKnown RBP4.24□□□□□ -1.73
HMGN4-202ENST00000477243 PRM3Q9NNZ6 103 aa4.24□□□□□ -1.73
HMGN4-202ENST00000477243 ATP1B4Q9UN42 357 aaPredicted RBP4.24□□□□□ -1.73
HMGN4-202ENST00000477243 COG6Q9Y2V7 657 aa4.24□□□□□ -1.73
HMGN4-202ENST00000477243 PDE4DIPQ5VU43 2346 aa4.23□□□□□ -1.73
HMGN4-202ENST00000477243 RBM47A0AV96 593 aaKnown RBP4.23□□□□□ -1.73
HMGN4-202ENST00000477243 BANK1Q8NDB2 785 aa4.23□□□□□ -1.73
HMGN4-202ENST00000477243 CRISPLD2Q9H0B8 497 aa4.23□□□□□ -1.73
HMGN4-202ENST00000477243 GNPATO15228 680 aa4.22□□□□□ -1.73
HMGN4-202ENST00000477243 HSPA6P17066 643 aa4.22□□□□□ -1.73
HMGN4-202ENST00000477243 ERCC3P19447 782 aa4.22□□□□□ -1.73
HMGN4-202ENST00000477243 PLA2G5P39877 138 aa4.22□□□□□ -1.73
HMGN4-202ENST00000477243 KCTD2Q14681 263 aa4.22□□□□□ -1.73
HMGN4-202ENST00000477243 SLC17A8Q8NDX2 589 aa4.22□□□□□ -1.73
HMGN4-202ENST00000477243 FBXO22Q8NEZ5 403 aa4.22□□□□□ -1.73
HMGN4-202ENST00000477243 PBXIP1Q96AQ6 731 aa4.22□□□□□ -1.73
HMGN4-202ENST00000477243 NUTM2FA1L443 756 aa4.21□□□□□ -1.74
HMGN4-202ENST00000477243 GPR37O15354 613 aa4.21□□□□□ -1.74
HMGN4-202ENST00000477243 PSEN1P49768 467 aa4.21□□□□□ -1.74
HMGN4-202ENST00000477243 HIC1Q14526 733 aa4.21□□□□□ -1.74
HMGN4-202ENST00000477243 GIGYF2Q6Y7W6 1299 aaKnown RBP4.21□□□□□ -1.74
HMGN4-202ENST00000477243 DRC1Q96MC2 740 aa4.21□□□□□ -1.74
HMGN4-202ENST00000477243 MNX1P50219 401 aaPredicted RBP4.2□□□□□ -1.74
HMGN4-202ENST00000477243 FAM122AQ96E09 287 aa4.2□□□□□ -1.74
HMGN4-202ENST00000477243 IVNS1ABPQ9Y6Y0 642 aa4.2□□□□□ -1.74
HMGN4-202ENST00000477243 NHSL1Q5SYE7 1610 aa4.2□□□□□ -1.74
HMGN4-202ENST00000477243 RGS12O14924 1447 aa4.2□□□□□ -1.74
HMGN4-202ENST00000477243 ASXL2Q76L83 1435 aa4.2□□□□□ -1.74
HMGN4-202ENST00000477243 USP19O94966 1318 aa4.2□□□□□ -1.74
HMGN4-202ENST00000477243 ARID4BQ4LE39 1312 aaPredicted RBP4.2□□□□□ -1.74
HMGN4-202ENST00000477243 TBC1D12O60347 775 aa4.19□□□□□ -1.74
HMGN4-202ENST00000477243 FCHSD2O94868 740 aa4.19□□□□□ -1.74
HMGN4-202ENST00000477243 MS4A1P11836 297 aa4.19□□□□□ -1.74
HMGN4-202ENST00000477243 PDIA6Q15084 440 aa4.19□□□□□ -1.74
HMGN4-202ENST00000477243 TMEM259Q4ZIN3 620 aa4.19□□□□□ -1.74
HMGN4-202ENST00000477243 ANKRD13AQ8IZ07 590 aa4.19□□□□□ -1.74
HMGN4-202ENST00000477243 SPATA32Q96LK8 384 aa4.19□□□□□ -1.74
HMGN4-202ENST00000477243 NESP48681 1621 aa4.19□□□□□ -1.74
HMGN4-202ENST00000477243 SMARCA4P51532 1647 aa4.19□□□□□ -1.74
HMGN4-202ENST00000477243 TSR1Q2NL82 804 aaKnown RBP4.18□□□□□ -1.74
HMGN4-202ENST00000477243 B4GALNT3Q6L9W6 998 aa4.18□□□□□ -1.74
HMGN4-202ENST00000477243 SPDYE1Q8NFV5 336 aaPredicted RBP4.18□□□□□ -1.74
HMGN4-202ENST00000477243 VRTNQ9H8Y1 702 aa4.18□□□□□ -1.74
HMGN4-202ENST00000477243 CREBZFQ9NS37 354 aa4.18□□□□□ -1.74
HMGN4-202ENST00000477243 MED14O60244 1454 aa4.18□□□□□ -1.74
HMGN4-202ENST00000477243 CHD8Q9HCK8 2581 aa4.17□□□□□ -1.74
HMGN4-202ENST00000477243 UNCXA6NJT0 531 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms