RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 DNAJC5Q9H3Z4 198 aa11.28□□□□□ -0.6
SSB-208ENST00000468600 ZFRQ96KR1 1074 aaKnown RBP11.26□□□□□ -0.61
SSB-208ENST00000468600 PCDHGA10Q9Y5H3 936 aa11.26□□□□□ -0.61
SSB-208ENST00000468600 GFRA3O60609 400 aa11.25□□□□□ -0.61
SSB-208ENST00000468600 NKX1-1Q15270 411 aaPredicted RBP11.25□□□□□ -0.61
SSB-208ENST00000468600 KIAA1468Q9P260 1216 aa11.22□□□□□ -0.61
SSB-208ENST00000468600 SEPT9Q9UHD8 586 aaPredicted RBP11.21□□□□□ -0.61
SSB-208ENST00000468600 PDE4AP27815 886 aa11.2□□□□□ -0.62
SSB-208ENST00000468600 EMILIN3Q9NT22 766 aa11.17□□□□□ -0.62
SSB-208ENST00000468600 NRG2O14511 850 aaPredicted RBP11.16□□□□□ -0.62
SSB-208ENST00000468600 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
SSB-208ENST00000468600 FBXW7Q969H0 707 aa11.16□□□□□ -0.62
SSB-208ENST00000468600 ONECUT3O60422 494 aaPredicted RBP11.15□□□□□ -0.62
SSB-208ENST00000468600 MAP3K9P80192 1104 aa11.15□□□□□ -0.62
SSB-208ENST00000468600 TSR3Q9UJK0 312 aaKnown RBP11.15□□□□□ -0.62
SSB-208ENST00000468600 HPS5Q9UPZ3 1129 aa11.14□□□□□ -0.63
SSB-208ENST00000468600 PHF14O94880 888 aa11.13□□□□□ -0.63
SSB-208ENST00000468600 FAM98CQ17RN3 349 aaKnown RBP11.13□□□□□ -0.63
SSB-208ENST00000468600 PRKD2Q9BZL6 878 aa11.13□□□□□ -0.63
SSB-208ENST00000468600 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
SSB-208ENST00000468600 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.12□□□□□ -0.63
SSB-208ENST00000468600 MFSD10Q14728 455 aa11.11□□□□□ -0.63
SSB-208ENST00000468600 LARP6Q9BRS8 491 aaKnown RBP11.11□□□□□ -0.63
SSB-208ENST00000468600 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
SSB-208ENST00000468600 LRCH3Q96II8 777 aa11.1□□□□□ -0.63
SSB-208ENST00000468600 TJAP1Q5JTD0 557 aa11.09□□□□□ -0.63
SSB-208ENST00000468600 C6orf132Q5T0Z8 1188 aa11.08□□□□□ -0.64
SSB-208ENST00000468600 GTPBP6O43824 516 aaPredicted RBP11.07□□□□□ -0.64
SSB-208ENST00000468600 ZNF787Q6DD87 383 aa11.06□□□□□ -0.64
SSB-208ENST00000468600 ZNF775Q96BV0 537 aaPredicted RBP11.05□□□□□ -0.64
SSB-208ENST00000468600 V9GY48 417 aaPredicted RBP11.05□□□□□ -0.64
SSB-208ENST00000468600 DCAF8L2P0C7V8 631 aa11.03□□□□□ -0.64
SSB-208ENST00000468600 PPP1R18Q6NYC8 613 aa11.02□□□□□ -0.65
SSB-208ENST00000468600 EPAS1Q99814 870 aa11.01□□□□□ -0.65
SSB-208ENST00000468600 MTRQ99707 1265 aa11□□□□□ -0.65
SSB-208ENST00000468600 PPP4CP60510 307 aa10.98□□□□□ -0.65
SSB-208ENST00000468600 TSKSQ9UJT2 592 aa10.98□□□□□ -0.65
SSB-208ENST00000468600 PDZRN3Q9UPQ7 1066 aa10.98□□□□□ -0.65
SSB-208ENST00000468600 IL21Q9HBE4 155 aa10.97□□□□□ -0.65
SSB-208ENST00000468600 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.65
SSB-208ENST00000468600 ZNF516Q92618 1163 aa10.95□□□□□ -0.66
SSB-208ENST00000468600 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.94□□□□□ -0.66
SSB-208ENST00000468600 SAMD7Q7Z3H4 446 aa10.93□□□□□ -0.66
SSB-208ENST00000468600 PACS2Q86VP3 889 aa10.91□□□□□ -0.66
SSB-208ENST00000468600 SMAPO00193 183 aa10.9□□□□□ -0.66
SSB-208ENST00000468600 TSR1Q2NL82 804 aaKnown RBP10.9□□□□□ -0.66
SSB-208ENST00000468600 DPYSL4O14531 572 aa10.89□□□□□ -0.67
SSB-208ENST00000468600 CAMK2BQ13554 666 aa10.89□□□□□ -0.67
SSB-208ENST00000468600 CADPS2Q86UW7 1296 aa10.89□□□□□ -0.67
SSB-208ENST00000468600 NKX2-3Q8TAU0 364 aa10.89□□□□□ -0.67
SSB-208ENST00000468600 FAM198AQ9UFP1 575 aa10.89□□□□□ -0.67
SSB-208ENST00000468600 C3orf80F5H4A9 247 aa10.88□□□□□ -0.67
SSB-208ENST00000468600 TRIM67Q6ZTA4 783 aa10.88□□□□□ -0.67
SSB-208ENST00000468600 DDX12PQ92771 950 aa10.88□□□□□ -0.67
SSB-208ENST00000468600 EN1Q05925 392 aaPredicted RBP10.87□□□□□ -0.67
SSB-208ENST00000468600 APLP1P51693 650 aa10.85□□□□□ -0.67
SSB-208ENST00000468600 POTECB2RU33 542 aa10.83□□□□□ -0.68
SSB-208ENST00000468600 CDCA7LQ96GN5 454 aa10.83□□□□□ -0.68
SSB-208ENST00000468600 MAP3K7O43318 606 aa10.82□□□□□ -0.68
SSB-208ENST00000468600 NBR1Q14596 966 aa10.81□□□□□ -0.68
SSB-208ENST00000468600 PRSS12P56730 875 aa10.8□□□□□ -0.68
SSB-208ENST00000468600 MYT1Q01538 1121 aa10.8□□□□□ -0.68
SSB-208ENST00000468600 LCE2AQ5TA79 106 aaPredicted RBP10.79□□□□□ -0.68
SSB-208ENST00000468600 EMID1Q96A84 441 aaPredicted RBP10.79□□□□□ -0.68
SSB-208ENST00000468600 TATDN2Q93075 761 aa10.78□□□□□ -0.68
SSB-208ENST00000468600 GGCXP38435 758 aa10.77□□□□□ -0.69
SSB-208ENST00000468600 TMUB1Q9BVT8 246 aa10.77□□□□□ -0.69
SSB-208ENST00000468600 PRIM1P49642 420 aaKnown RBP10.76□□□□□ -0.69
SSB-208ENST00000468600 PNMA3Q9UL41 463 aa10.76□□□□□ -0.69
SSB-208ENST00000468600 NBPF26B4DH59 902 aa10.75□□□□□ -0.69
SSB-208ENST00000468600 RNF40O75150 1001 aa10.75□□□□□ -0.69
SSB-208ENST00000468600 COPS2P61201 443 aa10.75□□□□□ -0.69
SSB-208ENST00000468600 PKDCCQ504Y2 493 aa10.74□□□□□ -0.69
SSB-208ENST00000468600 DGAT1O75907 488 aa10.73□□□□□ -0.69
SSB-208ENST00000468600 PDIA6Q15084 440 aa10.73□□□□□ -0.69
SSB-208ENST00000468600 SLC19A1P41440 591 aa10.71□□□□□ -0.69
SSB-208ENST00000468600 TREML4Q6UXN2 200 aa10.71□□□□□ -0.69
SSB-208ENST00000468600 SPDYE16A6NNV3 312 aaPredicted RBP10.7□□□□□ -0.7
SSB-208ENST00000468600 RNF223E7ERA6 249 aa10.7□□□□□ -0.7
SSB-208ENST00000468600 PRR20EP86478 221 aa10.7□□□□□ -0.7
SSB-208ENST00000468600 PRR20CP86479 221 aa10.7□□□□□ -0.7
SSB-208ENST00000468600 PRR20DP86480 221 aa10.7□□□□□ -0.7
SSB-208ENST00000468600 PRR20BP86481 221 aa10.7□□□□□ -0.7
SSB-208ENST00000468600 PRR20AP86496 221 aa10.7□□□□□ -0.7
SSB-208ENST00000468600 ZPR1O75312 459 aa10.69□□□□□ -0.7
SSB-208ENST00000468600 NUDT18Q6ZVK8 323 aa10.69□□□□□ -0.7
SSB-208ENST00000468600 CERKQ8TCT0 537 aa10.69□□□□□ -0.7
SSB-208ENST00000468600 SPRYD7Q5W111 196 aa10.68□□□□□ -0.7
SSB-208ENST00000468600 BBXQ8WY36 941 aaPredicted RBP10.68□□□□□ -0.7
SSB-208ENST00000468600 SWT1Q5T5J6 900 aaKnown RBP10.66□□□□□ -0.7
SSB-208ENST00000468600 ZNF598Q86UK7 904 aaKnown RBP10.65□□□□□ -0.7
SSB-208ENST00000468600 CDHR5Q9HBB8 845 aa10.65□□□□□ -0.7
SSB-208ENST00000468600 FAM187AA6NFU0 413 aa10.63□□□□□ -0.71
SSB-208ENST00000468600 ST8SIA5O15466 376 aa10.63□□□□□ -0.71
SSB-208ENST00000468600 HDGFP51858 240 aaKnown RBP10.63□□□□□ -0.71
SSB-208ENST00000468600 NECTIN2Q92692 538 aa10.63□□□□□ -0.71
SSB-208ENST00000468600 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
SSB-208ENST00000468600 GDF9O60383 454 aa10.62□□□□□ -0.71
SSB-208ENST00000468600 TLL1O43897 1013 aa10.61□□□□□ -0.71
SSB-208ENST00000468600 E2F4Q16254 413 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms