RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 ADAM33Q9BZ11 813 aa7.54□□□□□ -1.2
RBM39-220ENST00000455343 SLC4A5Q9BY07 1137 aa7.53□□□□□ -1.2
RBM39-220ENST00000455343 VPS9D1Q9Y2B5 631 aa7.53□□□□□ -1.2
RBM39-220ENST00000455343 ATAD2BQ9ULI0 1458 aa7.53□□□□□ -1.2
RBM39-220ENST00000455343 DPYSL4O14531 572 aa7.52□□□□□ -1.21
RBM39-220ENST00000455343 PAXIP1Q6ZW49 1069 aaPredicted RBP7.52□□□□□ -1.21
RBM39-220ENST00000455343 PCDHGA10Q9Y5H3 936 aa7.52□□□□□ -1.21
RBM39-220ENST00000455343 CFAP44Q96MT7 982 aa7.51□□□□□ -1.21
RBM39-220ENST00000455343 ZBED2Q9BTP6 218 aa7.51□□□□□ -1.21
RBM39-220ENST00000455343 NESP48681 1621 aa7.5□□□□□ -1.21
RBM39-220ENST00000455343 PHF14O94880 888 aa7.5□□□□□ -1.21
RBM39-220ENST00000455343 TYW1BQ6NUM6 668 aa7.49□□□□□ -1.21
RBM39-220ENST00000455343 HCSTQ9UBK5 93 aa7.49□□□□□ -1.21
RBM39-220ENST00000455343 FBXW7Q969H0 707 aa7.48□□□□□ -1.21
RBM39-220ENST00000455343 KCTD12Q96CX2 325 aaKnown RBP7.48□□□□□ -1.21
RBM39-220ENST00000455343 STAC3Q96MF2 364 aa7.48□□□□□ -1.21
RBM39-220ENST00000455343 HMGXB3Q12766 1538 aa7.47□□□□□ -1.21
RBM39-220ENST00000455343 PPP1R3GB7ZBB8 358 aa7.47□□□□□ -1.21
RBM39-220ENST00000455343 BHMG1C9JSJ3 638 aaPredicted RBP7.47□□□□□ -1.21
RBM39-220ENST00000455343 PDIA6Q15084 440 aa7.46□□□□□ -1.22
RBM39-220ENST00000455343 EPAS1Q99814 870 aa7.46□□□□□ -1.22
RBM39-220ENST00000455343 COL9A1P20849 921 aa7.45□□□□□ -1.22
RBM39-220ENST00000455343 SMARCA2P51531 1590 aa7.45□□□□□ -1.22
RBM39-220ENST00000455343 E2F4Q16254 413 aa7.44□□□□□ -1.22
RBM39-220ENST00000455343 THOC2Q8NI27 1593 aaKnown RBP7.43□□□□□ -1.22
RBM39-220ENST00000455343 PROX2Q3B8N5 592 aa7.43□□□□□ -1.22
RBM39-220ENST00000455343 MRPL50Q8N5N7 158 aaKnown RBP7.43□□□□□ -1.22
RBM39-220ENST00000455343 DDX12PQ92771 950 aa7.43□□□□□ -1.22
RBM39-220ENST00000455343 NBPF3Q9H094 633 aa7.43□□□□□ -1.22
RBM39-220ENST00000455343 SPDYE16A6NNV3 312 aaPredicted RBP7.42□□□□□ -1.22
RBM39-220ENST00000455343 ARIH1Q9Y4X5 557 aaPredicted RBP7.42□□□□□ -1.22
RBM39-220ENST00000455343 C6orf132Q5T0Z8 1188 aa7.41□□□□□ -1.22
RBM39-220ENST00000455343 WDR70Q9NW82 654 aa7.41□□□□□ -1.22
RBM39-220ENST00000455343 PLA2G2EQ9NZK7 142 aa7.41□□□□□ -1.22
RBM39-220ENST00000455343 RABGEF1Q9UJ41 708 aa7.41□□□□□ -1.22
RBM39-220ENST00000455343 PDS5BQ9NTI5 1447 aa7.41□□□□□ -1.22
RBM39-220ENST00000455343 GOLGA8CPA6NN73 597 aa7.4□□□□□ -1.22
RBM39-220ENST00000455343 NBR1Q14596 966 aa7.4□□□□□ -1.22
RBM39-220ENST00000455343 THSD4Q6ZMP0 1018 aa7.4□□□□□ -1.22
RBM39-220ENST00000455343 RBM33Q96EV2 1170 aaKnown RBP7.4□□□□□ -1.22
RBM39-220ENST00000455343 BAZ1BQ9UIG0 1483 aaKnown RBP7.4□□□□□ -1.22
RBM39-220ENST00000455343 LAMC3Q9Y6N6 1575 aa7.4□□□□□ -1.22
RBM39-220ENST00000455343 SMARCA4P51532 1647 aa7.39□□□□□ -1.23
RBM39-220ENST00000455343 EN1Q05925 392 aaPredicted RBP7.39□□□□□ -1.23
RBM39-220ENST00000455343 WNT2BQ93097 391 aa7.39□□□□□ -1.23
RBM39-220ENST00000455343 PTPN5P54829 565 aa7.38□□□□□ -1.23
RBM39-220ENST00000455343 PEG3Q9GZU2 1588 aa7.37□□□□□ -1.23
RBM39-220ENST00000455343 ONECUT3O60422 494 aaPredicted RBP7.37□□□□□ -1.23
RBM39-220ENST00000455343 CADPSQ9ULU8 1353 aa7.36□□□□□ -1.23
RBM39-220ENST00000455343 TRIM6-TRIM34B2RNG4 842 aa7.36□□□□□ -1.23
RBM39-220ENST00000455343 MAP3K7O43318 606 aa7.36□□□□□ -1.23
RBM39-220ENST00000455343 TSR1Q2NL82 804 aaKnown RBP7.36□□□□□ -1.23
RBM39-220ENST00000455343 TSHZ2Q9NRE2 1034 aa7.36□□□□□ -1.23
RBM39-220ENST00000455343 KIAA1468Q9P260 1216 aa7.36□□□□□ -1.23
RBM39-220ENST00000455343 BAZ1AQ9NRL2 1556 aaPredicted RBP7.36□□□□□ -1.23
RBM39-220ENST00000455343 PRIM1P49642 420 aaKnown RBP7.35□□□□□ -1.23
RBM39-220ENST00000455343 LAPTM4BQ86VI4 370 aa7.35□□□□□ -1.23
RBM39-220ENST00000455343 ANKK1Q8NFD2 765 aa7.34□□□□□ -1.23
RBM39-220ENST00000455343 GRXCR2A6NFK2 248 aa7.33□□□□□ -1.24
RBM39-220ENST00000455343 SEPT9Q9UHD8 586 aaPredicted RBP7.33□□□□□ -1.24
RBM39-220ENST00000455343 MRC2Q9UBG0 1479 aa7.32□□□□□ -1.24
RBM39-220ENST00000455343 ZFRQ96KR1 1074 aaKnown RBP7.32□□□□□ -1.24
RBM39-220ENST00000455343 WDR62O43379 1518 aa7.32□□□□□ -1.24
RBM39-220ENST00000455343 OSBPP22059 807 aa7.31□□□□□ -1.24
RBM39-220ENST00000455343 BCAMP50895 628 aa7.31□□□□□ -1.24
RBM39-220ENST00000455343 TSKSQ9UJT2 592 aa7.31□□□□□ -1.24
RBM39-220ENST00000455343 SOWAHBA6NEL2 793 aa7.3□□□□□ -1.24
RBM39-220ENST00000455343 FAM98CQ17RN3 349 aaKnown RBP7.3□□□□□ -1.24
RBM39-220ENST00000455343 CERKQ8TCT0 537 aa7.3□□□□□ -1.24
RBM39-220ENST00000455343 MROH2BQ7Z745 1585 aa7.29□□□□□ -1.24
RBM39-220ENST00000455343 KIF21AQ7Z4S6 1674 aa7.29□□□□□ -1.24
RBM39-220ENST00000455343 CDHR5Q9HBB8 845 aa7.29□□□□□ -1.24
RBM39-220ENST00000455343 PRSS12P56730 875 aa7.28□□□□□ -1.24
RBM39-220ENST00000455343 IFFO2Q5TF58 517 aa7.28□□□□□ -1.24
RBM39-220ENST00000455343 PACS2Q86VP3 889 aa7.28□□□□□ -1.24
RBM39-220ENST00000455343 KCNV2Q8TDN2 545 aa7.28□□□□□ -1.24
RBM39-220ENST00000455343 ARHGEF1Q92888 912 aaKnown RBP7.28□□□□□ -1.24
RBM39-220ENST00000455343 CDCA7LQ96GN5 454 aa7.28□□□□□ -1.24
RBM39-220ENST00000455343 FAM198AQ9UFP1 575 aa7.28□□□□□ -1.24
RBM39-220ENST00000455343 NYAP1Q6ZVC0 841 aa7.25□□□□□ -1.25
RBM39-220ENST00000455343 LRCH3Q96II8 777 aa7.25□□□□□ -1.25
RBM39-220ENST00000455343 WBP1LQ9NX94 342 aa7.25□□□□□ -1.25
RBM39-220ENST00000455343 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.25□□□□□ -1.25
RBM39-220ENST00000455343 RBM27Q9P2N5 1060 aaKnown RBP7.25□□□□□ -1.25
RBM39-220ENST00000455343 CEP164Q9UPV0 1460 aa7.24□□□□□ -1.25
RBM39-220ENST00000455343 NBPF26B4DH59 902 aa7.24□□□□□ -1.25
RBM39-220ENST00000455343 C3orf80F5H4A9 247 aa7.24□□□□□ -1.25
RBM39-220ENST00000455343 SMAPO00193 183 aa7.24□□□□□ -1.25
RBM39-220ENST00000455343 MLLT3P42568 568 aaPredicted RBP7.24□□□□□ -1.25
RBM39-220ENST00000455343 FANCD2Q9BXW9 1451 aa7.24□□□□□ -1.25
RBM39-220ENST00000455343 ITGBL1O95965 494 aaPredicted RBP7.23□□□□□ -1.25
RBM39-220ENST00000455343 TSR3Q9UJK0 312 aaKnown RBP7.23□□□□□ -1.25
RBM39-220ENST00000455343 PNMA3Q9UL41 463 aa7.23□□□□□ -1.25
RBM39-220ENST00000455343 HPS5Q9UPZ3 1129 aa7.23□□□□□ -1.25
RBM39-220ENST00000455343 CFTRP13569 1480 aa7.23□□□□□ -1.25
RBM39-220ENST00000455343 A0A0G2JS52 829 aa7.22□□□□□ -1.25
RBM39-220ENST00000455343 PLCB2Q00722 1185 aa7.22□□□□□ -1.25
RBM39-220ENST00000455343 TTC13Q8NBP0 860 aa7.22□□□□□ -1.25
RBM39-220ENST00000455343 TATDN2Q93075 761 aa7.22□□□□□ -1.25
RBM39-220ENST00000455343 NPDC1Q9NQX5 325 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms