RNA–Protein interactions for RNA: ENST00000412134.5

LINC01249-201, Transcript of long intergenic non-protein coding RNA 1249, humanhuman

TSL 1 (best) BASIC

Gene LINC01249, Length 2,663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01249-201ENST00000412134 RYDENQ9NUL5 291 aaKnown RBP8.14□□□□□ -1.11
LINC01249-201ENST00000412134 KDM5CP41229 1560 aa8.13□□□□□ -1.11
LINC01249-201ENST00000412134 C3P01024 1663 aa8.13□□□□□ -1.11
LINC01249-201ENST00000412134 NCOA1Q15788 1441 aa8.13□□□□□ -1.11
LINC01249-201ENST00000412134 GTPBP6O43824 516 aaPredicted RBP8.12□□□□□ -1.11
LINC01249-201ENST00000412134 CEBPAP49715 358 aaPredicted RBP8.12□□□□□ -1.11
LINC01249-201ENST00000412134 ZNF518AQ6AHZ1 1483 aa8.12□□□□□ -1.11
LINC01249-201ENST00000412134 AGLP35573 1532 aa8.12□□□□□ -1.11
LINC01249-201ENST00000412134 TRAPPC8Q9Y2L5 1435 aa8.11□□□□□ -1.11
LINC01249-201ENST00000412134 MYO5CQ9NQX4 1742 aa8.11□□□□□ -1.11
LINC01249-201ENST00000412134 GSE1Q14687 1217 aa8.11□□□□□ -1.11
LINC01249-201ENST00000412134 DIP2CQ9Y2E4 1556 aa8.1□□□□□ -1.11
LINC01249-201ENST00000412134 CNTLNQ9NXG0 1405 aa8.09□□□□□ -1.11
LINC01249-201ENST00000412134 EFCAB2Q5VUJ9 269 aa8.09□□□□□ -1.11
LINC01249-201ENST00000412134 MLH3Q9UHC1 1453 aa8.09□□□□□ -1.11
LINC01249-201ENST00000412134 NPATQ14207 1427 aa8.08□□□□□ -1.12
LINC01249-201ENST00000412134 MROH2AA6NES4 1674 aa8.08□□□□□ -1.12
LINC01249-201ENST00000412134 ABCA6Q8N139 1617 aa8.07□□□□□ -1.12
LINC01249-201ENST00000412134 CDK13Q14004 1512 aaKnown RBP8.07□□□□□ -1.12
LINC01249-201ENST00000412134 NKX1-1Q15270 411 aaPredicted RBP8.07□□□□□ -1.12
LINC01249-201ENST00000412134 PLA2R1Q13018 1463 aa8.07□□□□□ -1.12
LINC01249-201ENST00000412134 CAMSAP1Q5T5Y3 1602 aa8.07□□□□□ -1.12
LINC01249-201ENST00000412134 ZNF692Q9BU19 519 aaPredicted RBP8.06□□□□□ -1.12
LINC01249-201ENST00000412134 PODXL2Q9NZ53 605 aa8.06□□□□□ -1.12
LINC01249-201ENST00000412134 ZNF142P52746 1687 aaPredicted RBP8.06□□□□□ -1.12
LINC01249-201ENST00000412134 BRPF1P55201 1214 aaPredicted RBP8.06□□□□□ -1.12
LINC01249-201ENST00000412134 MED1Q15648 1581 aaPredicted RBP8.05□□□□□ -1.12
LINC01249-201ENST00000412134 RIOK3O14730 519 aaKnown RBP8.05□□□□□ -1.12
LINC01249-201ENST00000412134 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.05□□□□□ -1.12
LINC01249-201ENST00000412134 SSUH2Q9Y2M2 353 aa8.05□□□□□ -1.12
LINC01249-201ENST00000412134 LMOD2Q6P5Q4 547 aa8.05□□□□□ -1.12
LINC01249-201ENST00000412134 KIF14Q15058 1648 aa8.04□□□□□ -1.12
LINC01249-201ENST00000412134 TCOF1Q13428 1488 aaKnown RBP8.04□□□□□ -1.12
LINC01249-201ENST00000412134 SPDYE2BA6NHP3 402 aa8.04□□□□□ -1.12
LINC01249-201ENST00000412134 UBAP1LF5GYI3 381 aa8.04□□□□□ -1.12
LINC01249-201ENST00000412134 SPDYE6P0CI01 402 aa8.04□□□□□ -1.12
LINC01249-201ENST00000412134 SPDYE2Q495Y8 402 aa8.04□□□□□ -1.12
LINC01249-201ENST00000412134 AFAP1Q8N556 730 aa8.04□□□□□ -1.12
LINC01249-201ENST00000412134 EEA1Q15075 1411 aa8.03□□□□□ -1.12
LINC01249-201ENST00000412134 ARHGAP5Q13017 1502 aa8.03□□□□□ -1.12
LINC01249-201ENST00000412134 SGIP1Q9BQI5 828 aa8.03□□□□□ -1.12
LINC01249-201ENST00000412134 CDC42BPBQ9Y5S2 1711 aa8.03□□□□□ -1.12
LINC01249-201ENST00000412134 ESF1Q9H501 851 aaKnown RBP8.03□□□□□ -1.12
LINC01249-201ENST00000412134 ZNF335Q9H4Z2 1342 aaPredicted RBP8.03□□□□□ -1.12
LINC01249-201ENST00000412134 KIDINS220Q9ULH0 1771 aa8.03□□□□□ -1.12
LINC01249-201ENST00000412134 ABCC1P33527 1531 aa8.02□□□□□ -1.13
LINC01249-201ENST00000412134 TROQ12816 1431 aaPredicted RBP8.02□□□□□ -1.13
LINC01249-201ENST00000412134 CDK11AQ9UQ88 783 aaPredicted RBP8.02□□□□□ -1.13
LINC01249-201ENST00000412134 ITSN2Q9NZM3 1697 aa8.02□□□□□ -1.13
LINC01249-201ENST00000412134 MYO3AQ8NEV4 1616 aa8.01□□□□□ -1.13
LINC01249-201ENST00000412134 RNF25Q96BH1 459 aaPredicted RBP8.01□□□□□ -1.13
LINC01249-201ENST00000412134 FMN1Q68DA7 1419 aa8.01□□□□□ -1.13
LINC01249-201ENST00000412134 VGFO15240 615 aaPredicted RBP8.01□□□□□ -1.13
LINC01249-201ENST00000412134 PREX2Q70Z35 1606 aa8.01□□□□□ -1.13
LINC01249-201ENST00000412134 CEP170BQ9Y4F5 1589 aaPredicted RBP8.01□□□□□ -1.13
LINC01249-201ENST00000412134 CPS1P31327 1500 aa8□□□□□ -1.13
LINC01249-201ENST00000412134 SUPT6HQ7KZ85 1726 aaKnown RBP8□□□□□ -1.13
LINC01249-201ENST00000412134 ZMYM3Q14202 1370 aa8□□□□□ -1.13
LINC01249-201ENST00000412134 CLIP1P30622 1438 aa8□□□□□ -1.13
LINC01249-201ENST00000412134 NCKAP5LQ9HCH0 1330 aa7.99□□□□□ -1.13
LINC01249-201ENST00000412134 HSPA1LP34931 641 aa7.98□□□□□ -1.13
LINC01249-201ENST00000412134 PTPRKQ15262 1439 aa7.98□□□□□ -1.13
LINC01249-201ENST00000412134 PLXNC1O60486 1568 aa7.98□□□□□ -1.13
LINC01249-201ENST00000412134 SAMD9LQ8IVG5 1584 aa7.97□□□□□ -1.13
LINC01249-201ENST00000412134 TOM1O60784 492 aa7.97□□□□□ -1.13
LINC01249-201ENST00000412134 MYT1LQ9UL68 1186 aa7.97□□□□□ -1.13
LINC01249-201ENST00000412134 CLTCQ00610 1675 aaKnown RBP7.97□□□□□ -1.13
LINC01249-201ENST00000412134 POLR1AO95602 1720 aaPredicted RBP7.97□□□□□ -1.13
LINC01249-201ENST00000412134 SPINK5Q9NQ38 1064 aaPredicted RBP7.96□□□□□ -1.13
LINC01249-201ENST00000412134 LRRIQ1Q96JM4 1722 aa7.96□□□□□ -1.13
LINC01249-201ENST00000412134 A2ML1A8K2U0 1454 aa7.96□□□□□ -1.14
LINC01249-201ENST00000412134 WDR70Q9NW82 654 aa7.96□□□□□ -1.14
LINC01249-201ENST00000412134 CDC42BPAQ5VT25 1732 aa7.95□□□□□ -1.14
LINC01249-201ENST00000412134 DNMT1P26358 1616 aaKnown RBP7.95□□□□□ -1.14
LINC01249-201ENST00000412134 ALKQ9UM73 1620 aa7.95□□□□□ -1.14
LINC01249-201ENST00000412134 NEURL4Q96JN8 1562 aa7.95□□□□□ -1.14
LINC01249-201ENST00000412134 SHANK2Q9UPX8 1470 aa7.95□□□□□ -1.14
LINC01249-201ENST00000412134 ARHGAP35Q9NRY4 1499 aa7.95□□□□□ -1.14
LINC01249-201ENST00000412134 STK25O00506 426 aa7.95□□□□□ -1.14
LINC01249-201ENST00000412134 CAPN15O75808 1086 aa7.95□□□□□ -1.14
LINC01249-201ENST00000412134 CHRM1P11229 460 aaPredicted RBP7.95□□□□□ -1.14
LINC01249-201ENST00000412134 NEUROD2Q15784 382 aa7.94□□□□□ -1.14
LINC01249-201ENST00000412134 INO80Q9ULG1 1556 aaPredicted RBP7.94□□□□□ -1.14
LINC01249-201ENST00000412134 VWDEQ8N2E2 1590 aa7.93□□□□□ -1.14
LINC01249-201ENST00000412134 ATP7AQ04656 1500 aa7.93□□□□□ -1.14
LINC01249-201ENST00000412134 CCDC18Q5T9S5 1454 aa7.93□□□□□ -1.14
LINC01249-201ENST00000412134 KIAA1107Q9UPP5 1409 aa7.92□□□□□ -1.14
LINC01249-201ENST00000412134 FAM135AQ9P2D6 1515 aa7.92□□□□□ -1.14
LINC01249-201ENST00000412134 MED14O60244 1454 aa7.92□□□□□ -1.14
LINC01249-201ENST00000412134 A2MP01023 1474 aa7.92□□□□□ -1.14
LINC01249-201ENST00000412134 PIP4K2BP78356 416 aa7.92□□□□□ -1.14
LINC01249-201ENST00000412134 DEPDC5O75140 1603 aa7.91□□□□□ -1.14
LINC01249-201ENST00000412134 ZC3H15Q8WU90 426 aaKnown RBP7.91□□□□□ -1.14
LINC01249-201ENST00000412134 ADGBQ8N7X0 1667 aa7.91□□□□□ -1.14
LINC01249-201ENST00000412134 KCNV2Q8TDN2 545 aa7.91□□□□□ -1.14
LINC01249-201ENST00000412134 SPAG9O60271 1321 aaKnown RBP7.91□□□□□ -1.14
LINC01249-201ENST00000412134 PLEKHH2Q8IVE3 1493 aa7.91□□□□□ -1.14
LINC01249-201ENST00000412134 SYCP2Q9BX26 1530 aa7.91□□□□□ -1.14
LINC01249-201ENST00000412134 SYNMO15061 1565 aa7.9□□□□□ -1.15
LINC01249-201ENST00000412134 NUBP1P53384 320 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms